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The map label for this gene is 158318350

Identifier: 158318350

GI number: 158318350

Start: 8049714

End: 8051399

Strand: Direct

Name: 158318350

Synonym: Franean1_6615

Alternate gene names: NA

Gene position: 8049714-8051399 (Clockwise)

Preceding gene: 158318348

Following gene: 158318351

Centisome position: 89.62

GC content: 69.63

Gene sequence:

>1686_bases
ATGAGCCCCGTGAGCCGCGGTCGCAACGACAGGAAGAAGCCCTCTTCCAAGGGCCCGGCGCCAGCCAGACGCGCGTCGCG
GCCCGCGCCGTCCTCCGTGCCGGAGATCCGGAACCAGTCTCCGCGGCCTCATGACGACCGCGAGGCGGAGCTGCGCGCGT
TCACCACCGACATGCTCAGCATGGGCGGGGTACTCCGCGAGAGCGACGACCCGCTGATGGCGGAGGTGGTCGGTGCGACG
TTCGCCGTGCTCGATGACCTCACCGATGGCTCGGTCGGGGAGGCATTCCTTGAGGAGATCGTGCCGCGGCTGGAGACCGC
GGCGACCGGGGACGCTCTTGCGGTGCTGCTGGCGATAGGTGCCGTCGTGCCAGGGCCGGTCAGTGCCACGGCGGATGCCG
CCGCCGGCCGGCTGACCGCGGCCGGGGTCTCCCTGCCGCAGTGGGCGGACGAGCTTACGGTGCCGCCGCTGGCCGGCGAC
TTCCAGCGCCGGTGCGACGACGAAGGTATCGCCGTCTTCCTGAGCTGCACGGTCGAGCGGGCTGGTCGGCGCCATGCGTT
CCTGGTGTGCGTCGACCCATTGGCCTGCGGTGAGGCCGGAGACCTCCTCGTCCTCCCGGCCGAGGATCTTCCGAGGGTTC
TGGAGGGGGTCACCGCGGAGGCTCGCAAGAACAAGGTCAGGCTCCGAACCGAGACGCTAGACGCCGAGGAGTTCCGCTGG
CAGGTCGAGAACGCCCTGAATGCGCGGGCGGTGCACGACGACGAGCTCTCGTTCGACGGGGACGACGGGGAAGCTGCCTC
CTTTCTCCGGTTCGGCGACGAGGACGAGATCCCCTTCGGGGAGGAGGACGGCGAGGGCGGGCCGCCGTACGAGGCCGTGG
CGCTGGTGCTGCGGTCGCGCCTCGCGACGCTACCGACCCCGCGGAGGCCACCCGCGCCGCACGCGGATGACGACGGGGAC
GAGGGAATCGACGCGCTCGGCGGTATGGCCGACCTCGTAAAGATGCTGAACGAGCGGGGGGCGAACCCCGCCGAGCTCGC
CCTGGCGAACCTGACCGGATGGCGCGGCCTGCCGGCGACGGGCCGTCCGCCGACGCCACCGCTCCCAAAGAAGCCGAGGC
GGGGCAAGGGGCAGCAGGCCCCGGTCTACCAGGTCAAGGTCGGGCTGCGCGGCACGAAACCACCGATCTGGCGACGGCTG
GAGGTGCCAGCCGACACCAACCTGGCACGCCTGCACACGATCATCCAACTGGCGTTCGACTGGGAAGACAGCCATCTGCA
CGTCTTCGAGACGCCTTACGGCAGATTTGGCACTCCGGACGTGGATCTTGGCCACCGCGACGAGAAGTCGGTGTCGCTGG
AGCAGGTGCTTCCCGACGTCAAAGCAAAGATTAGCTATACCTACGATTTCGGCGACTCCTGGGAACACGAGATCGCTCTG
GAGAAGATCCTCGAACGCAGCCCATCTGTCCGGTATCCGCGCTGCACCGGCGGGCGTCGCGCGGCCCCGCCGGAGGACTG
CGGCGGTATCTGGGGCTACGAGGCGCTCCTGCAGATCCTGGACGATCCCAGTCATCCCGAGCACCACGAGCGGCTGGAAT
GGCTGGGCCTCGACGACCCCGCCGACCTCGACCCCACCGAGTTCTACGGAGCCGGAGTGACGGCCGCACTGTCCCGGCTC
CGCTGA

Upstream 100 bases:

>100_bases
CCGGCGTGGCCGGTCCCCGCCGTCAGGTCGATCAGGCACAGGGCGCGGGGCAGACCGTGCCGGCCGCATGACGGCACAAC
GCCCAGGGCAGACTGAGGAC

Downstream 100 bases:

>100_bases
TGTCCCGGCTCCGCTGATGGCCCGGCTCCGCTGAGGCGGCGCGGCGTTGGCGGTGGCGGATCGTGAGTGCATTTTTGTGA
GACTGCGGAGGGTGGCTGGC

Product: plasmid pRiA4b ORF-3 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 561; Mature: 560

Protein sequence:

>561_residues
MSPVSRGRNDRKKPSSKGPAPARRASRPAPSSVPEIRNQSPRPHDDREAELRAFTTDMLSMGGVLRESDDPLMAEVVGAT
FAVLDDLTDGSVGEAFLEEIVPRLETAATGDALAVLLAIGAVVPGPVSATADAAAGRLTAAGVSLPQWADELTVPPLAGD
FQRRCDDEGIAVFLSCTVERAGRRHAFLVCVDPLACGEAGDLLVLPAEDLPRVLEGVTAEARKNKVRLRTETLDAEEFRW
QVENALNARAVHDDELSFDGDDGEAASFLRFGDEDEIPFGEEDGEGGPPYEAVALVLRSRLATLPTPRRPPAPHADDDGD
EGIDALGGMADLVKMLNERGANPAELALANLTGWRGLPATGRPPTPPLPKKPRRGKGQQAPVYQVKVGLRGTKPPIWRRL
EVPADTNLARLHTIIQLAFDWEDSHLHVFETPYGRFGTPDVDLGHRDEKSVSLEQVLPDVKAKISYTYDFGDSWEHEIAL
EKILERSPSVRYPRCTGGRRAAPPEDCGGIWGYEALLQILDDPSHPEHHERLEWLGLDDPADLDPTEFYGAGVTAALSRL
R

Sequences:

>Translated_561_residues
MSPVSRGRNDRKKPSSKGPAPARRASRPAPSSVPEIRNQSPRPHDDREAELRAFTTDMLSMGGVLRESDDPLMAEVVGAT
FAVLDDLTDGSVGEAFLEEIVPRLETAATGDALAVLLAIGAVVPGPVSATADAAAGRLTAAGVSLPQWADELTVPPLAGD
FQRRCDDEGIAVFLSCTVERAGRRHAFLVCVDPLACGEAGDLLVLPAEDLPRVLEGVTAEARKNKVRLRTETLDAEEFRW
QVENALNARAVHDDELSFDGDDGEAASFLRFGDEDEIPFGEEDGEGGPPYEAVALVLRSRLATLPTPRRPPAPHADDDGD
EGIDALGGMADLVKMLNERGANPAELALANLTGWRGLPATGRPPTPPLPKKPRRGKGQQAPVYQVKVGLRGTKPPIWRRL
EVPADTNLARLHTIIQLAFDWEDSHLHVFETPYGRFGTPDVDLGHRDEKSVSLEQVLPDVKAKISYTYDFGDSWEHEIAL
EKILERSPSVRYPRCTGGRRAAPPEDCGGIWGYEALLQILDDPSHPEHHERLEWLGLDDPADLDPTEFYGAGVTAALSRL
R
>Mature_560_residues
SPVSRGRNDRKKPSSKGPAPARRASRPAPSSVPEIRNQSPRPHDDREAELRAFTTDMLSMGGVLRESDDPLMAEVVGATF
AVLDDLTDGSVGEAFLEEIVPRLETAATGDALAVLLAIGAVVPGPVSATADAAAGRLTAAGVSLPQWADELTVPPLAGDF
QRRCDDEGIAVFLSCTVERAGRRHAFLVCVDPLACGEAGDLLVLPAEDLPRVLEGVTAEARKNKVRLRTETLDAEEFRWQ
VENALNARAVHDDELSFDGDDGEAASFLRFGDEDEIPFGEEDGEGGPPYEAVALVLRSRLATLPTPRRPPAPHADDDGDE
GIDALGGMADLVKMLNERGANPAELALANLTGWRGLPATGRPPTPPLPKKPRRGKGQQAPVYQVKVGLRGTKPPIWRRLE
VPADTNLARLHTIIQLAFDWEDSHLHVFETPYGRFGTPDVDLGHRDEKSVSLEQVLPDVKAKISYTYDFGDSWEHEIALE
KILERSPSVRYPRCTGGRRAAPPEDCGGIWGYEALLQILDDPSHPEHHERLEWLGLDDPADLDPTEFYGAGVTAALSRLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To A.rhizogenes plasmid pRia4B ORF-3 in virA region [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012912 [H]

Pfam domain/function: PF07929 PRiA4_ORF3 [H]

EC number: NA

Molecular weight: Translated: 60862; Mature: 60731

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPVSRGRNDRKKPSSKGPAPARRASRPAPSSVPEIRNQSPRPHDDREAELRAFTTDMLS
CCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHH
MGGVLRESDDPLMAEVVGATFAVLDDLTDGSVGEAFLEEIVPRLETAATGDALAVLLAIG
HCCHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
AVVPGPVSATADAAAGRLTAAGVSLPQWADELTVPPLAGDFQRRCDDEGIAVFLSCTVER
HCCCCCCCCCHHHHCCCCEECCCCCHHHHHHCCCCCCCCHHHHHCCCCCEEEEEEEEHHH
AGRRHAFLVCVDPLACGEAGDLLVLPAEDLPRVLEGVTAEARKNKVRLRTETLDAEEFRW
CCCCEEEEEEECCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHH
QVENALNARAVHDDELSFDGDDGEAASFLRFGDEDEIPFGEEDGEGGPPYEAVALVLRSR
HHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
LATLPTPRRPPAPHADDDGDEGIDALGGMADLVKMLNERGANPAELALANLTGWRGLPAT
HHHCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHCCCCHHHHEEHHCCCCCCCCCC
GRPPTPPLPKKPRRGKGQQAPVYQVKVGLRGTKPPIWRRLEVPADTNLARLHTIIQLAFD
CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHEEEECCCCCCHHHHHHHHHHHCC
WEDSHLHVFETPYGRFGTPDVDLGHRDEKSVSLEQVLPDVKAKISYTYDFGDSWEHEIAL
CCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHCHHHEEEEEEECCCCCCHHHHHH
EKILERSPSVRYPRCTGGRRAAPPEDCGGIWGYEALLQILDDPSHPEHHERLEWLGLDDP
HHHHHCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHCCCCCCCHHHHHHCCCCCCC
ADLDPTEFYGAGVTAALSRLR
CCCCCHHHHCCCHHHHHHHCC
>Mature Secondary Structure 
SPVSRGRNDRKKPSSKGPAPARRASRPAPSSVPEIRNQSPRPHDDREAELRAFTTDMLS
CCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHH
MGGVLRESDDPLMAEVVGATFAVLDDLTDGSVGEAFLEEIVPRLETAATGDALAVLLAIG
HCCHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
AVVPGPVSATADAAAGRLTAAGVSLPQWADELTVPPLAGDFQRRCDDEGIAVFLSCTVER
HCCCCCCCCCHHHHCCCCEECCCCCHHHHHHCCCCCCCCHHHHHCCCCCEEEEEEEEHHH
AGRRHAFLVCVDPLACGEAGDLLVLPAEDLPRVLEGVTAEARKNKVRLRTETLDAEEFRW
CCCCEEEEEEECCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHH
QVENALNARAVHDDELSFDGDDGEAASFLRFGDEDEIPFGEEDGEGGPPYEAVALVLRSR
HHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
LATLPTPRRPPAPHADDDGDEGIDALGGMADLVKMLNERGANPAELALANLTGWRGLPAT
HHHCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHCCCCHHHHEEHHCCCCCCCCCC
GRPPTPPLPKKPRRGKGQQAPVYQVKVGLRGTKPPIWRRLEVPADTNLARLHTIIQLAFD
CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHEEEECCCCCCHHHHHHHHHHHCC
WEDSHLHVFETPYGRFGTPDVDLGHRDEKSVSLEQVLPDVKAKISYTYDFGDSWEHEIAL
CCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHCHHHEEEEEEECCCCCCHHHHHH
EKILERSPSVRYPRCTGGRRAAPPEDCGGIWGYEALLQILDDPSHPEHHERLEWLGLDDP
HHHHHCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHCCCCCCCHHHHHHCCCCCCC
ADLDPTEFYGAGVTAALSRLR
CCCCCHHHHCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]