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The map label for this gene is 158318348

Identifier: 158318348

GI number: 158318348

Start: 8046335

End: 8047099

Strand: Direct

Name: 158318348

Synonym: Franean1_6613

Alternate gene names: NA

Gene position: 8046335-8047099 (Clockwise)

Preceding gene: 158318345

Following gene: 158318350

Centisome position: 89.58

GC content: 69.41

Gene sequence:

>765_bases
ATGTTACGCCGAAGACTAATGCACCACTGTAACCTGGTCAATGTGAGCAAAGACGAGGGCGAAAGCGTCGACGCCCGGAT
GAGCCGCCGGGAGCGGCTGCGGGCGGAGACCAGCCGGGAGATCAAGGCCATCGCGCTGCGACAGATGGCCGACGGGGGGC
CGGGGGCGATCTCGCTGCGCGGCATCGCCCGCGAGATGGGGATGACCCCACGCGCGATCTACAGCTACTTCTCCACCCGA
GACGACCTGATCACGGCACTGATCAGCGGGATCGCCGCCTCGCTCGCAGAGGCCGTGGAGACCGCCAGCAACGCAGTGCC
CGATACCGATCCCGGCGGCAGGCTGATGGCCTGGGGCCAGGCCCTGAGGGAATGGGCGCTGGCTCACCCGGAGAGCTTCC
GGCTCTTCTACGGCCACCCCATCCCCGGCTACCAGCCCCCCGACGACGGGCCGGTGGACCGGACGGCACGCCGGGTGTGC
CGCGACCTCACCCGCCTGGTGGCCATCGCATGGCCCCACGCCCGGCACCACCAGCCCGAGGACACCTCGTGGTCCGATCT
TCACCCGGACTACGTCGCGAAGATCCAGGCAGACCTTCCGGATGTGCCACCCGCCGCGGCAGCGCTCGCGCTGCGCGTCT
GGGGCCGAATGCACGGCCTGGTGGCACTGGAGATCGACGGCCACATCCATCCGGTCGCAGGCAACCCGGCCGCGCTGCAC
CGAGCCGAGATGCTTGACCTGGTCAGGTCACTGGGCCTGACCTGA

Upstream 100 bases:

>100_bases
GGCGGCGTAGGCCAGGCTGGCCTCCTCGTCGAGCACGTCGACTCCGACGATGACGTAAGCGGACATTGGTTTTCCTGCCT
CTTGGAAACGGCGTATACTT

Downstream 100 bases:

>100_bases
CCGCCGAAGAGGTCGGGGTCGCGGCGCGGACCTGCTTCCGGCACTTCCCGACCAAGCCCGACATGGTCCTGTGGGACGCC
GCCGACTACGACCTGCTGGC

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MLRRRLMHHCNLVNVSKDEGESVDARMSRRERLRAETSREIKAIALRQMADGGPGAISLRGIAREMGMTPRAIYSYFSTR
DDLITALISGIAASLAEAVETASNAVPDTDPGGRLMAWGQALREWALAHPESFRLFYGHPIPGYQPPDDGPVDRTARRVC
RDLTRLVAIAWPHARHHQPEDTSWSDLHPDYVAKIQADLPDVPPAAAALALRVWGRMHGLVALEIDGHIHPVAGNPAALH
RAEMLDLVRSLGLT

Sequences:

>Translated_254_residues
MLRRRLMHHCNLVNVSKDEGESVDARMSRRERLRAETSREIKAIALRQMADGGPGAISLRGIAREMGMTPRAIYSYFSTR
DDLITALISGIAASLAEAVETASNAVPDTDPGGRLMAWGQALREWALAHPESFRLFYGHPIPGYQPPDDGPVDRTARRVC
RDLTRLVAIAWPHARHHQPEDTSWSDLHPDYVAKIQADLPDVPPAAAALALRVWGRMHGLVALEIDGHIHPVAGNPAALH
RAEMLDLVRSLGLT
>Mature_254_residues
MLRRRLMHHCNLVNVSKDEGESVDARMSRRERLRAETSREIKAIALRQMADGGPGAISLRGIAREMGMTPRAIYSYFSTR
DDLITALISGIAASLAEAVETASNAVPDTDPGGRLMAWGQALREWALAHPESFRLFYGHPIPGYQPPDDGPVDRTARRVC
RDLTRLVAIAWPHARHHQPEDTSWSDLHPDYVAKIQADLPDVPPAAAALALRVWGRMHGLVALEIDGHIHPVAGNPAALH
RAEMLDLVRSLGLT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR011075
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 27982; Mature: 27982

Theoretical pI: Translated: 7.44; Mature: 7.44

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRRRLMHHCNLVNVSKDEGESVDARMSRRERLRAETSREIKAIALRQMADGGPGAISLR
CHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHH
GIAREMGMTPRAIYSYFSTRDDLITALISGIAASLAEAVETASNAVPDTDPGGRLMAWGQ
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
ALREWALAHPESFRLFYGHPIPGYQPPDDGPVDRTARRVCRDLTRLVAIAWPHARHHQPE
HHHHHHHCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCC
DTSWSDLHPDYVAKIQADLPDVPPAAAALALRVWGRMHGLVALEIDGHIHPVAGNPAALH
CCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCEEEEEECCEEEECCCCHHHHH
RAEMLDLVRSLGLT
HHHHHHHHHHHCCC
>Mature Secondary Structure
MLRRRLMHHCNLVNVSKDEGESVDARMSRRERLRAETSREIKAIALRQMADGGPGAISLR
CHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHH
GIAREMGMTPRAIYSYFSTRDDLITALISGIAASLAEAVETASNAVPDTDPGGRLMAWGQ
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
ALREWALAHPESFRLFYGHPIPGYQPPDDGPVDRTARRVCRDLTRLVAIAWPHARHHQPE
HHHHHHHCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCC
DTSWSDLHPDYVAKIQADLPDVPPAAAALALRVWGRMHGLVALEIDGHIHPVAGNPAALH
CCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCEEEEEECCEEEECCCCHHHHH
RAEMLDLVRSLGLT
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]