| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is terE [H]
Identifier: 158318307
GI number: 158318307
Start: 7996375
End: 7996959
Strand: Reverse
Name: terE [H]
Synonym: Franean1_6572
Alternate gene names: 158318307
Gene position: 7996959-7996375 (Counterclockwise)
Preceding gene: 158318310
Following gene: 158318306
Centisome position: 89.03
GC content: 67.35
Gene sequence:
>585_bases ATGGCGATCAGCCTTGCCAAGGGCGGCAACGTCAGCCTCACGAAGCAGGCCGCCGAGGCAGGAACCGGAGCGCTGACCGC GCTCACCGTCGGGCTCGGGTGGGATGCCCGCACGACGACCGGCACCGACTTCGATCTCGACGCCTCCGCCATCGGCGTGA AGAGCGACGGCAAGGCACTGTCCGACGGGCACTTCGTCTTCTTCAACAACATGAAGTCCCCGGAGGGCGCCATCACGCTC TCCGGCGACAACGTGACCGGCGCCGGCGAGGGCGACGACGAGTCCGTCAACATCAACCTGGGCCTGGTCCCGGCGGAGAT CGACAAGATCGTCGTGCCGGTCTCCATCTACGACGCGGCGAACCGGGCCCAGAACTTCGGCCAGGTCCGCAACGCCTACA TCCGCGTGGTGGACCAGACCGGCACCGAGCTCGTCCGTTACGACCTCTCCGAGGACTACTCGACCGAGACGGTCGTCATC TTCGGCGAGGTGTACCGCAACGGAGCCGACTGGAAGTTCCGCGCGGTCGGCCAGGGGCACAACGACCTCAGCGGCCTCGC CCGCGACCACGGCGTCAACGTCTGA
Upstream 100 bases:
>100_bases TGTGTGCAAGGGTGACCCGGGAAGCGACCGTGTTGGTCCGATGGTCCTCGACGTGGAGGATCGTCGGCGTTAAAGGGATC CTTCAGGAAGGACATTCGTC
Downstream 100 bases:
>100_bases CCGCCCGCGAGCCGAGTGCCTGCGGGTCGAGTTCCCGCGGGCTGAACATCCGCGGGCCGGTCAGCCGGCGCGCGGGTGTC CGCGCGGGCTGACCGGCCGC
Product: stress protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 194; Mature: 193
Protein sequence:
>194_residues MAISLAKGGNVSLTKQAAEAGTGALTALTVGLGWDARTTTGTDFDLDASAIGVKSDGKALSDGHFVFFNNMKSPEGAITL SGDNVTGAGEGDDESVNINLGLVPAEIDKIVVPVSIYDAANRAQNFGQVRNAYIRVVDQTGTELVRYDLSEDYSTETVVI FGEVYRNGADWKFRAVGQGHNDLSGLARDHGVNV
Sequences:
>Translated_194_residues MAISLAKGGNVSLTKQAAEAGTGALTALTVGLGWDARTTTGTDFDLDASAIGVKSDGKALSDGHFVFFNNMKSPEGAITL SGDNVTGAGEGDDESVNINLGLVPAEIDKIVVPVSIYDAANRAQNFGQVRNAYIRVVDQTGTELVRYDLSEDYSTETVVI FGEVYRNGADWKFRAVGQGHNDLSGLARDHGVNV >Mature_193_residues AISLAKGGNVSLTKQAAEAGTGALTALTVGLGWDARTTTGTDFDLDASAIGVKSDGKALSDGHFVFFNNMKSPEGAITLS GDNVTGAGEGDDESVNINLGLVPAEIDKIVVPVSIYDAANRAQNFGQVRNAYIRVVDQTGTELVRYDLSEDYSTETVVIF GEVYRNGADWKFRAVGQGHNDLSGLARDHGVNV
Specific function: Not known; seems to contribute to the tellurium resistance (Ter) mechanism. Also involved in phage inhibition (Phi) and colicin resistance (PacB) [H]
COG id: COG2310
COG function: function code T; Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CAPAB/TerDEXZ family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003325 [H]
Pfam domain/function: PF02342 TerD [H]
EC number: NA
Molecular weight: Translated: 20385; Mature: 20253
Theoretical pI: Translated: 4.34; Mature: 4.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAISLAKGGNVSLTKQAAEAGTGALTALTVGLGWDARTTTGTDFDLDASAIGVKSDGKAL CEEEECCCCCEEEEHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCC SDGHFVFFNNMKSPEGAITLSGDNVTGAGEGDDESVNINLGLVPAEIDKIVVPVSIYDAA CCCCEEEEECCCCCCCEEEECCCCEECCCCCCCCEEEEEEEEECCCCCEEEEEEEEECHH NRAQNFGQVRNAYIRVVDQTGTELVRYDLSEDYSTETVVIFGEVYRNGADWKFRAVGQGH HHHHHHHHHCEEEEEEEECCCCEEEEEECCCCCCCCEEEEEEHHHCCCCCEEEEEECCCC NDLSGLARDHGVNV CHHHHHHHHCCCCC >Mature Secondary Structure AISLAKGGNVSLTKQAAEAGTGALTALTVGLGWDARTTTGTDFDLDASAIGVKSDGKAL EEEECCCCCEEEEHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCC SDGHFVFFNNMKSPEGAITLSGDNVTGAGEGDDESVNINLGLVPAEIDKIVVPVSIYDAA CCCCEEEEECCCCCCCEEEECCCCEECCCCCCCCEEEEEEEEECCCCCEEEEEEEEECHH NRAQNFGQVRNAYIRVVDQTGTELVRYDLSEDYSTETVVIFGEVYRNGADWKFRAVGQGH HHHHHHHHHCEEEEEEEECCCCEEEEEECCCCCCCCEEEEEEHHHCCCCCEEEEEECCCC NDLSGLARDHGVNV CHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7665479 [H]