| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318302
Identifier: 158318302
GI number: 158318302
Start: 7988909
End: 7989598
Strand: Reverse
Name: 158318302
Synonym: Franean1_6567
Alternate gene names: NA
Gene position: 7989598-7988909 (Counterclockwise)
Preceding gene: 158318304
Following gene: 158318293
Centisome position: 88.95
GC content: 72.46
Gene sequence:
>690_bases GTGTCGCCACCCCGCTGCCGGGGCGTCCCGATCCGCACGCCGCCGTCCGTGCCACCGGCGTCCCAGCCGCCCCCGGCCGG GATGTCTAGGCGGATCTCGCATATGCGTGTGACCGACTCCCTCGCGACGGCAGTCGAATACCCGGACACCCCCGCGGGGG CGATCGTCTCGGTTGCCTGGCGGATAGAGGGCGCCGGCCGTGTCGTGGGCGGGCTGCTGCCGCGCGGCCATCCCGACGGC GGCACGCTGGGCAAGCGGATTCTGCGCGGAGAACGCATCTGGGCCGCCGAGATGCTCCCCTGGGAGCAGGAGATCTCCGC GGAGATGAGCCTGGTTGAGCCCGGGCCGCCCGGCAGCCCGGCCCGGATCATCGTGCACGGCCCGTCCGGCGACATCGTCG GCTACCTGGACCAGCCCGGGCTTCCCCCCGGGCGCCTCCAGCGGCTCACGACGGGCCTGAGCCGCGACGCGCGGCAGGTG CGGATCCGAGCTGGCGGACGGGTGTGGTGGGTACGCGCCACTCATTTGTTCGGCGTGCGCGTGATGCGCGACTCCGGTGT CCTCGTCTACGCCACCAGAGGGCTACACGCGGAGTTCGAGCCGGTGGCGGACTCGCTGGACATGAGCGTCGTGCTGCTGA CGCTCGCGTCCATCCCCAGTTCCGCCTACGCCCCGATCCTGGGGTTCTGA
Upstream 100 bases:
>100_bases GCGTGCACTGGCATCTGCACACCATCCTATGGTCGGGCGCTTCCGGTGCCGTCCCGGCCCCATCCGCGACCCCGCCCGAG CCGGGCAGCGGTGGGCGCTG
Downstream 100 bases:
>100_bases CACAGCGGCGGGCCGAGCCGGGCCCGGCTCGGCCCGCCCCGGCTCGGCCCCTCGGTCAGGCGCTGACGATCCGCCGGCCC TCGAAGGCGCGGCCGAGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 229; Mature: 228
Protein sequence:
>229_residues MSPPRCRGVPIRTPPSVPPASQPPPAGMSRRISHMRVTDSLATAVEYPDTPAGAIVSVAWRIEGAGRVVGGLLPRGHPDG GTLGKRILRGERIWAAEMLPWEQEISAEMSLVEPGPPGSPARIIVHGPSGDIVGYLDQPGLPPGRLQRLTTGLSRDARQV RIRAGGRVWWVRATHLFGVRVMRDSGVLVYATRGLHAEFEPVADSLDMSVVLLTLASIPSSAYAPILGF
Sequences:
>Translated_229_residues MSPPRCRGVPIRTPPSVPPASQPPPAGMSRRISHMRVTDSLATAVEYPDTPAGAIVSVAWRIEGAGRVVGGLLPRGHPDG GTLGKRILRGERIWAAEMLPWEQEISAEMSLVEPGPPGSPARIIVHGPSGDIVGYLDQPGLPPGRLQRLTTGLSRDARQV RIRAGGRVWWVRATHLFGVRVMRDSGVLVYATRGLHAEFEPVADSLDMSVVLLTLASIPSSAYAPILGF >Mature_228_residues SPPRCRGVPIRTPPSVPPASQPPPAGMSRRISHMRVTDSLATAVEYPDTPAGAIVSVAWRIEGAGRVVGGLLPRGHPDGG TLGKRILRGERIWAAEMLPWEQEISAEMSLVEPGPPGSPARIIVHGPSGDIVGYLDQPGLPPGRLQRLTTGLSRDARQVR IRAGGRVWWVRATHLFGVRVMRDSGVLVYATRGLHAEFEPVADSLDMSVVLLTLASIPSSAYAPILGF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24491; Mature: 24359
Theoretical pI: Translated: 10.70; Mature: 10.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPPRCRGVPIRTPPSVPPASQPPPAGMSRRISHMRVTDSLATAVEYPDTPAGAIVSVAW CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEE RIEGAGRVVGGLLPRGHPDGGTLGKRILRGERIWAAEMLPWEQEISAEMSLVEPGPPGSP EECCCCCEECCCCCCCCCCCCHHHHHHHCCCCEEEHHCCCCHHHHCCEEEEECCCCCCCC ARIIVHGPSGDIVGYLDQPGLPPGRLQRLTTGLSRDARQVRIRAGGRVWWVRATHLFGVR CEEEEECCCCCEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEEECCEEEEEEEEEEEEEE VMRDSGVLVYATRGLHAEFEPVADSLDMSVVLLTLASIPSSAYAPILGF EEECCCEEEEEECCCCCCCHHHHHHCCHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure SPPRCRGVPIRTPPSVPPASQPPPAGMSRRISHMRVTDSLATAVEYPDTPAGAIVSVAW CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEE RIEGAGRVVGGLLPRGHPDGGTLGKRILRGERIWAAEMLPWEQEISAEMSLVEPGPPGSP EECCCCCEECCCCCCCCCCCCHHHHHHHCCCCEEEHHCCCCHHHHCCEEEEECCCCCCCC ARIIVHGPSGDIVGYLDQPGLPPGRLQRLTTGLSRDARQVRIRAGGRVWWVRATHLFGVR CEEEEECCCCCEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEEECCEEEEEEEEEEEEEE VMRDSGVLVYATRGLHAEFEPVADSLDMSVVLLTLASIPSSAYAPILGF EEECCCEEEEEECCCCCCCHHHHHHCCHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA