| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318293
Identifier: 158318293
GI number: 158318293
Start: 7976592
End: 7977968
Strand: Reverse
Name: 158318293
Synonym: Franean1_6558
Alternate gene names: NA
Gene position: 7977968-7976592 (Counterclockwise)
Preceding gene: 158318302
Following gene: 158318292
Centisome position: 88.82
GC content: 63.33
Gene sequence:
>1377_bases GTGCGAAAGAAACGTGACATAAGTACTGCACTGATAGTGCGGCGGAATCGCGAGGAGATGCCTACTTCGGCAGCCGTCGG TACGGGCCGGTCCGGTCCCATCGACATGGGACGAAGACGGCGAGTCCTAATTGTCGTCCAGAATCTTCCCGTCCGAATCG ATCGGAGGGTATGGCAGGAATGCGTGGCTCTCATCGCCTGCGGTTACCAGGTCTCGGTCATCTGCCCACGCGGTGACGGG GAGCGGCGCCATCAAATCATTGAAGGTGTCAGCGTGTGGACATACCGGGCCGCACCCGCGGCCAGCGGAGTGCTGAGCTA CATTTTCGAGTTCGTCTACTGCTGGTTTCGCACCTTCATCCTGACCCTGGCCGTGGTCCGTAAGGAGGGCTTCGATGTAA TTCAGGCATGCAACCCTCCCGACACGTACTGGTTGCTGGCGGTGCTTTATAAGCCGTTTGGTAGGAAGTTCGTCTTCGAC CATCACGATCTATGTCCGGAGCTGTACCGCTCGCGGTTCGACCGGGATTCCCCGATTTTGCTCCGCGCGCTGCTGCTGCT CGAACGGGCAAACCAGGCCATGGCCGACCATGTGATAGTCACGAATGACTCCTACCGACAGCTCGCCATGACCAGGGGTC GAAAGCGACCGGACCGGGTGACCGTGGTCCGCAGCGGACCGGACCCTGACCTCATGAAGCCAGCGTCGCAGCGCCCGGAG CTACGGCGTGGCCGCCGACACCTCGCCTGCTACCTGGGTGTCATGGGCCCGCAGGATGGCGTCGACCAGTTGCTCGACGC CATCGAGCACTATGTCCACGGTCTGCGCCGTACCGACTGCTTCTTCGCGTTGCTCGGCTTCGGTGACTGCCTGGATGAGT TGCGGGTGAGATCCAGCAGGCTCGCCCTCGATGACTGGGTCGAGTTCACCGGATTGGCCGACGACGTGATGATCCGCGAC TATCTCTCCACTGCAGCCGTCGGTTTGTCTCCCGACCCGCGCAGTCCCCTGAACGAGATCTCGACCATGAACAAGACCCT GGAATACATGGCCTATGGGCTACCGGTCGTGGCCTACGACCTGGTGGAGACGCGGGTCAGTGCGGCCGACGCGGCGGTCT ACGCGGCCTCGGACACAGCGGAGGACTTCGCCCGCACGCTCGCCGGCCTGCTGGACGACCCGGAAGGTTGCCGCGTCCTC GGAGCTCGCGGCAGGGAGCGGATCGTCAACGAGCTGTCCTGGCAGCATTCCGCGCGCAGATATGTGGAGATCTACGATCA CCTCCTCGGTGCCGGCGCCCGGCCCGTCATTCCGGTACCCCGACAGAGCGAAGCGCCGGTGGGGCAGGACCGGAACGATC AGCGGGCCGTCCGGTGA
Upstream 100 bases:
>100_bases CCAACCGATCCGCCGTCCGGCAGCTTGACCGGTAGCTATCTTGGCCGCAGCAGAAAGCCGGAGGGCGTTCAGAATCTTAC GTCGGCTACTTGGGGACAGA
Downstream 100 bases:
>100_bases GCGCCGCCCGTCCCCCCTGCTGTCCGGCATGCCACGGCACCGCCCTGGAGCCCCTGGCGACTATCGAGCGGTCGCCGGTG ATGACGGGGGTCCTCTGGCC
Product: group 1 glycosyl transferase
Products: NA
Alternate protein names: Glycosyl Transferase; Group 1 Glycosyl Transferase; Glycosyl Transferase Group 1 Family Protein; Glycosyl Transferase Family Protein
Number of amino acids: Translated: 458; Mature: 458
Protein sequence:
>458_residues MRKKRDISTALIVRRNREEMPTSAAVGTGRSGPIDMGRRRRVLIVVQNLPVRIDRRVWQECVALIACGYQVSVICPRGDG ERRHQIIEGVSVWTYRAAPAASGVLSYIFEFVYCWFRTFILTLAVVRKEGFDVIQACNPPDTYWLLAVLYKPFGRKFVFD HHDLCPELYRSRFDRDSPILLRALLLLERANQAMADHVIVTNDSYRQLAMTRGRKRPDRVTVVRSGPDPDLMKPASQRPE LRRGRRHLACYLGVMGPQDGVDQLLDAIEHYVHGLRRTDCFFALLGFGDCLDELRVRSSRLALDDWVEFTGLADDVMIRD YLSTAAVGLSPDPRSPLNEISTMNKTLEYMAYGLPVVAYDLVETRVSAADAAVYAASDTAEDFARTLAGLLDDPEGCRVL GARGRERIVNELSWQHSARRYVEIYDHLLGAGARPVIPVPRQSEAPVGQDRNDQRAVR
Sequences:
>Translated_458_residues MRKKRDISTALIVRRNREEMPTSAAVGTGRSGPIDMGRRRRVLIVVQNLPVRIDRRVWQECVALIACGYQVSVICPRGDG ERRHQIIEGVSVWTYRAAPAASGVLSYIFEFVYCWFRTFILTLAVVRKEGFDVIQACNPPDTYWLLAVLYKPFGRKFVFD HHDLCPELYRSRFDRDSPILLRALLLLERANQAMADHVIVTNDSYRQLAMTRGRKRPDRVTVVRSGPDPDLMKPASQRPE LRRGRRHLACYLGVMGPQDGVDQLLDAIEHYVHGLRRTDCFFALLGFGDCLDELRVRSSRLALDDWVEFTGLADDVMIRD YLSTAAVGLSPDPRSPLNEISTMNKTLEYMAYGLPVVAYDLVETRVSAADAAVYAASDTAEDFARTLAGLLDDPEGCRVL GARGRERIVNELSWQHSARRYVEIYDHLLGAGARPVIPVPRQSEAPVGQDRNDQRAVR >Mature_458_residues MRKKRDISTALIVRRNREEMPTSAAVGTGRSGPIDMGRRRRVLIVVQNLPVRIDRRVWQECVALIACGYQVSVICPRGDG ERRHQIIEGVSVWTYRAAPAASGVLSYIFEFVYCWFRTFILTLAVVRKEGFDVIQACNPPDTYWLLAVLYKPFGRKFVFD HHDLCPELYRSRFDRDSPILLRALLLLERANQAMADHVIVTNDSYRQLAMTRGRKRPDRVTVVRSGPDPDLMKPASQRPE LRRGRRHLACYLGVMGPQDGVDQLLDAIEHYVHGLRRTDCFFALLGFGDCLDELRVRSSRLALDDWVEFTGLADDVMIRD YLSTAAVGLSPDPRSPLNEISTMNKTLEYMAYGLPVVAYDLVETRVSAADAAVYAASDTAEDFARTLAGLLDDPEGCRVL GARGRERIVNELSWQHSARRYVEIYDHLLGAGARPVIPVPRQSEAPVGQDRNDQRAVR
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51803; Mature: 51803
Theoretical pI: Translated: 8.53; Mature: 8.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKKRDISTALIVRRNREEMPTSAAVGTGRSGPIDMGRRRRVLIVVQNLPVRIDRRVWQE CCCCHHHHHHHHEECCHHHCCCHHHCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHH CVALIACGYQVSVICPRGDGERRHQIIEGVSVWTYRAAPAASGVLSYIFEFVYCWFRTFI HHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHH LTLAVVRKEGFDVIQACNPPDTYWLLAVLYKPFGRKFVFDHHDLCPELYRSRFDRDSPIL HHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCHHCCHHHHHHHCCCCCHHH LRALLLLERANQAMADHVIVTNDSYRQLAMTRGRKRPDRVTVVRSGPDPDLMKPASQRPE HHHHHHHHHHHHHHHCCEEEECCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCH LRRGRRHLACYLGVMGPQDGVDQLLDAIEHYVHGLRRTDCFFALLGFGDCLDELRVRSSR HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LALDDWVEFTGLADDVMIRDYLSTAAVGLSPDPRSPLNEISTMNKTLEYMAYGLPVVAYD HHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHH LVETRVSAADAAVYAASDTAEDFARTLAGLLDDPEGCRVLGARGRERIVNELSWQHSARR HHHHHHHHHHHHEEECCCCHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHHHH YVEIYDHLLGAGARPVIPVPRQSEAPVGQDRNDQRAVR HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRKKRDISTALIVRRNREEMPTSAAVGTGRSGPIDMGRRRRVLIVVQNLPVRIDRRVWQE CCCCHHHHHHHHEECCHHHCCCHHHCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHH CVALIACGYQVSVICPRGDGERRHQIIEGVSVWTYRAAPAASGVLSYIFEFVYCWFRTFI HHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHH LTLAVVRKEGFDVIQACNPPDTYWLLAVLYKPFGRKFVFDHHDLCPELYRSRFDRDSPIL HHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCHHCCHHHHHHHCCCCCHHH LRALLLLERANQAMADHVIVTNDSYRQLAMTRGRKRPDRVTVVRSGPDPDLMKPASQRPE HHHHHHHHHHHHHHHCCEEEECCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCH LRRGRRHLACYLGVMGPQDGVDQLLDAIEHYVHGLRRTDCFFALLGFGDCLDELRVRSSR HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LALDDWVEFTGLADDVMIRDYLSTAAVGLSPDPRSPLNEISTMNKTLEYMAYGLPVVAYD HHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHH LVETRVSAADAAVYAASDTAEDFARTLAGLLDDPEGCRVLGARGRERIVNELSWQHSARR HHHHHHHHHHHHEEECCCCHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHHHH YVEIYDHLLGAGARPVIPVPRQSEAPVGQDRNDQRAVR HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA