| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is wcaA [C]
Identifier: 158318291
GI number: 158318291
Start: 7974311
End: 7975321
Strand: Reverse
Name: wcaA [C]
Synonym: Franean1_6556
Alternate gene names: 158318291
Gene position: 7975321-7974311 (Counterclockwise)
Preceding gene: 158318292
Following gene: 158318290
Centisome position: 88.79
GC content: 63.11
Gene sequence:
>1011_bases ATGAGAGTGGAAAGTGGCGCGCAGGCCGCTGCTGCCGAATACCAGGTTGCCGCCGAGACATCATCTCGACCGCGCCGCAC CCCGACGCCACCGCGAACAGGTTCGGTGCCGCTGGTGACGATTGGACTGCCCGTCCTCAACGGGGAGAACTTCCTGGAGC GGGCGCTCGAGTCGCTTGTCACCCAGGACTACCCAAACCTGCAGATCATCGTGGCGGACAATGGCAGCACGGACCGCACG GAAGAGATCTGCCGTGCTTTCACCCGTCGAGACGCGCGGATCGAGTACCATCGCAGCGCCGTGAACCGGGGTGCAGCTTG GAACTACAACCGGCTCGTCCGACTTGCCGCGGGTACGTACTTCAAATGGGCAGCCCATGACGACCTGTGCGCTCCCTCCT TGGTCAGCCGGTGTGTCGCGGGCCTGGAAGCCGGGCCCCGAGACGCCGTCCTGGCCTATCCGAAAACTGCTCTCATCGGC CTGGATGACGCGGTTATCGGTGACTTCGAGGACGAGATGGATCTTCGGGAGGAGCAGCCGCACGAGCGGCTAAAGCATTT TCTGTCGACCCGGACAGAATACCACCCGGTATTCGGAGTAATCCGGACAGAAGTGCTAGGGGGAACCAGTCTCATCGGCA GGTATGTCGGTTCCGATGTAGTCCTTCTGGCAGAGCTAGCATTGCGTGGAAAGTTCATCGAGGTGCCGGAGCGCCTGTTC CTCAGGCGTTTCCATGCGGGCACGTCCATGAATGCTAATCCGGGGGCCAGGGAGCGCGCTTCGTGGTTCGACCCGAAGAG GCGGGTGCCGGCGATGCCGATGACGGAGCGAACCGTGCGGATGGCCATCACCATCTGCTCCTGTGAACTACTTGGTCACG TCGAGCGTGTTCGCTGCCTGGCGGCTCTGGGACAACATTGGGCACGCCCCTATGCACGGCACATGGGGGGCGAAGTACGC GCGATAGCCGCGGACCGACTCGTACCCCGGCTCGGCTCGCTGCTCACCTAG
Upstream 100 bases:
>100_bases CGCAACTGGGAGTGCGCGCGGACGTCGTCCCTCTCGGCAGTCGGGGTCCTGTCCCTGCACAGCAGCTGGCCGACGCTCCG GAGAAGGATGGTGTGAAGTC
Downstream 100 bases:
>100_bases CGCCGATACGACTGGGACACGCGCGTCGGAACATGCATCGCCGCGGTTCCGGCCTATTACATTGGGCTGGGTGAGGCGAA TGTAGATCTTTGGAGTTGCG
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 336; Mature: 336
Protein sequence:
>336_residues MRVESGAQAAAAEYQVAAETSSRPRRTPTPPRTGSVPLVTIGLPVLNGENFLERALESLVTQDYPNLQIIVADNGSTDRT EEICRAFTRRDARIEYHRSAVNRGAAWNYNRLVRLAAGTYFKWAAHDDLCAPSLVSRCVAGLEAGPRDAVLAYPKTALIG LDDAVIGDFEDEMDLREEQPHERLKHFLSTRTEYHPVFGVIRTEVLGGTSLIGRYVGSDVVLLAELALRGKFIEVPERLF LRRFHAGTSMNANPGARERASWFDPKRRVPAMPMTERTVRMAITICSCELLGHVERVRCLAALGQHWARPYARHMGGEVR AIAADRLVPRLGSLLT
Sequences:
>Translated_336_residues MRVESGAQAAAAEYQVAAETSSRPRRTPTPPRTGSVPLVTIGLPVLNGENFLERALESLVTQDYPNLQIIVADNGSTDRT EEICRAFTRRDARIEYHRSAVNRGAAWNYNRLVRLAAGTYFKWAAHDDLCAPSLVSRCVAGLEAGPRDAVLAYPKTALIG LDDAVIGDFEDEMDLREEQPHERLKHFLSTRTEYHPVFGVIRTEVLGGTSLIGRYVGSDVVLLAELALRGKFIEVPERLF LRRFHAGTSMNANPGARERASWFDPKRRVPAMPMTERTVRMAITICSCELLGHVERVRCLAALGQHWARPYARHMGGEVR AIAADRLVPRLGSLLT >Mature_336_residues MRVESGAQAAAAEYQVAAETSSRPRRTPTPPRTGSVPLVTIGLPVLNGENFLERALESLVTQDYPNLQIIVADNGSTDRT EEICRAFTRRDARIEYHRSAVNRGAAWNYNRLVRLAAGTYFKWAAHDDLCAPSLVSRCVAGLEAGPRDAVLAYPKTALIG LDDAVIGDFEDEMDLREEQPHERLKHFLSTRTEYHPVFGVIRTEVLGGTSLIGRYVGSDVVLLAELALRGKFIEVPERLF LRRFHAGTSMNANPGARERASWFDPKRRVPAMPMTERTVRMAITICSCELLGHVERVRCLAALGQHWARPYARHMGGEVR AIAADRLVPRLGSLLT
Specific function: Slime polysaccharide colanic acid biosynthesis. [C]
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: NA
Molecular weight: Translated: 37326; Mature: 37326
Theoretical pI: Translated: 8.58; Mature: 8.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVESGAQAAAAEYQVAAETSSRPRRTPTPPRTGSVPLVTIGLPVLNGENFLERALESLV CCCCCCCHHHHHHHHEECCCCCCCCCCCCCCCCCCCCEEEECCEEECCHHHHHHHHHHHH TQDYPNLQIIVADNGSTDRTEEICRAFTRRDARIEYHRSAVNRGAAWNYNRLVRLAAGTY HCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCE FKWAAHDDLCAPSLVSRCVAGLEAGPRDAVLAYPKTALIGLDDAVIGDFEDEMDLREEQP EEECCCCCCCCHHHHHHHHHHCCCCCCCCEEECCCEEEEECCHHHHCCCHHHHHHHHCCH HERLKHFLSTRTEYHPVFGVIRTEVLGGTSLIGRYVGSDVVLLAELALRGKFIEVPERLF HHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHH LRRFHAGTSMNANPGARERASWFDPKRRVPAMPMTERTVRMAITICSCELLGHVERVRCL HHHHHCCCCCCCCCCCHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AALGQHWARPYARHMGGEVRAIAADRLVPRLGSLLT HHHHHHHCCHHHHHCCCCEEEHHHHHHHHHHHHHCC >Mature Secondary Structure MRVESGAQAAAAEYQVAAETSSRPRRTPTPPRTGSVPLVTIGLPVLNGENFLERALESLV CCCCCCCHHHHHHHHEECCCCCCCCCCCCCCCCCCCCEEEECCEEECCHHHHHHHHHHHH TQDYPNLQIIVADNGSTDRTEEICRAFTRRDARIEYHRSAVNRGAAWNYNRLVRLAAGTY HCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCE FKWAAHDDLCAPSLVSRCVAGLEAGPRDAVLAYPKTALIGLDDAVIGDFEDEMDLREEQP EEECCCCCCCCHHHHHHHHHHCCCCCCCCEEECCCEEEEECCHHHHCCCHHHHHHHHCCH HERLKHFLSTRTEYHPVFGVIRTEVLGGTSLIGRYVGSDVVLLAELALRGKFIEVPERLF HHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHH LRRFHAGTSMNANPGARERASWFDPKRRVPAMPMTERTVRMAITICSCELLGHVERVRCL HHHHHCCCCCCCCCCCHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AALGQHWARPYARHMGGEVRAIAADRLVPRLGSLLT HHHHHHHCCHHHHHCCCCEEEHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA