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The map label for this gene is infB [H]

Identifier: 158318290

GI number: 158318290

Start: 7972968

End: 7974209

Strand: Reverse

Name: infB [H]

Synonym: Franean1_6555

Alternate gene names: 158318290

Gene position: 7974209-7972968 (Counterclockwise)

Preceding gene: 158318291

Following gene: 158318289

Centisome position: 88.78

GC content: 68.6

Gene sequence:

>1242_bases
ATGACAGAGCCTTTCGATCCTGGCCTGGTAAAAGGCTCATCCGTGGCGCTCGCGGCTTACCAGGGGGAGTCGGAAATGGA
CGTAGTGACGGTTTGTCGAACGGTTTTTCGCCGGTGGTACGTGGTTGTTCCGGTCCTGGTTGCCACCGTGGTCGTGCTCT
GGGTCACAACGTCCAAGGCAGAACCGGTCTACCAGGCCGAGGCCCAGGCCATCGTCGTCGGACCGTCGGTGGAACAGAAC
GGTGAAATCGTACAGCCAGTCAACCCGCTGTCCTATTTCAACGACTCTCTCAAACTGCTCACACTGACCATATCGAGGAT
CATCAACGGCGAGCAGGCGCGGGACGGGATCAGGGCGGCGGGCTTCCGCGCGGATTACACGGTGACGGCGCCACCGGAAA
CGACATTCCTAGAGATCACCGCGACCGATCCCGATCCCGCCGAGGCCACTCGCACAGCGGCGCAGGTACTGGACCAGATC
ACCGCCAACACGAACGAACTACAGATGTCGGTGCCGGCGGGTCTGCGTTATGAGGTTCAGCGACTGTTCCAACCGGTGCG
CACGAGCAACGAGCCTGGGCGCAGCCTCCAGTTGCTGGCGACCATCGCGGTCCTGGGAGCGCTGGCCGCGTTGGGGCTGG
CACTGTCCGTCGACGCCGCGGCCAGGCGACGGGCCCGATCGCGCCGGGAGCGACCCCGGTCACACCGCGGCGCCTGGTCG
CGCCGGGATCCAAAGCGGACCGGCGGACGTCGACACCTGGCCGGGTCGCCGAAGGCGGTGTGGCCTGAGCCGGCGGTGTG
GCCTGAGCCGGCGGTGCAGTCTGAGCCGGCGGTGCAGTCTGAGCCGGCGGTGCAGTCTGAGCCGGCGGTGTGGCCTGAGC
CGGCGGTGCAGTCTGAGCCGGCGGTGCAGTCTGAGCCGGCGGTGCAGTCTGAGCCGGCGGTGCAGTCTGAGCCGGCGGTG
CAGTCTGAGCCGGCAAAGGCACCGCCGGTACCCGCCCAGGCCGCACCGGTGCCGGCCGGGCAGCCCGCGGCCACGCCGAT
GCCGTCCAAGGCCCCGAAGACGGCCGCGCCGTCGGTGCCCGCCCAGATGGCACGGGAAGAAGCCGGTGAGCGGTCCTGGT
CCCGCGAAGGGGCCGGCGGATGGTCCTTCGCCGTAGCGTCCTTCGACGGAGCGTCCGACGACGGAACTGGCGGGTGGTCC
TTCGACGGAGTCGGCAAGAGGCGGCCGGGGGCAGGCCTGTGA

Upstream 100 bases:

>100_bases
GCCGATACGACTGGGACACGCGCGTCGGAACATGCATCGCCGCGGTTCCGGCCTATTACATTGGGCTGGGTGAGGCGAAT
GTAGATCTTTGGAGTTGCGA

Downstream 100 bases:

>100_bases
CCGTGGCGCTCGACGGTGGCATGACCGCCGATTGCCTCGCCGATCCGGTCACCCCGGGTACCCGGCCGTGGGGCGGCGAG
GCGCCCCGTTCTCGCCGCGG

Product: lipopolysaccharide biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 413; Mature: 412

Protein sequence:

>413_residues
MTEPFDPGLVKGSSVALAAYQGESEMDVVTVCRTVFRRWYVVVPVLVATVVVLWVTTSKAEPVYQAEAQAIVVGPSVEQN
GEIVQPVNPLSYFNDSLKLLTLTISRIINGEQARDGIRAAGFRADYTVTAPPETTFLEITATDPDPAEATRTAAQVLDQI
TANTNELQMSVPAGLRYEVQRLFQPVRTSNEPGRSLQLLATIAVLGALAALGLALSVDAAARRRARSRRERPRSHRGAWS
RRDPKRTGGRRHLAGSPKAVWPEPAVWPEPAVQSEPAVQSEPAVQSEPAVWPEPAVQSEPAVQSEPAVQSEPAVQSEPAV
QSEPAKAPPVPAQAAPVPAGQPAATPMPSKAPKTAAPSVPAQMAREEAGERSWSREGAGGWSFAVASFDGASDDGTGGWS
FDGVGKRRPGAGL

Sequences:

>Translated_413_residues
MTEPFDPGLVKGSSVALAAYQGESEMDVVTVCRTVFRRWYVVVPVLVATVVVLWVTTSKAEPVYQAEAQAIVVGPSVEQN
GEIVQPVNPLSYFNDSLKLLTLTISRIINGEQARDGIRAAGFRADYTVTAPPETTFLEITATDPDPAEATRTAAQVLDQI
TANTNELQMSVPAGLRYEVQRLFQPVRTSNEPGRSLQLLATIAVLGALAALGLALSVDAAARRRARSRRERPRSHRGAWS
RRDPKRTGGRRHLAGSPKAVWPEPAVWPEPAVQSEPAVQSEPAVQSEPAVWPEPAVQSEPAVQSEPAVQSEPAVQSEPAV
QSEPAKAPPVPAQAAPVPAGQPAATPMPSKAPKTAAPSVPAQMAREEAGERSWSREGAGGWSFAVASFDGASDDGTGGWS
FDGVGKRRPGAGL
>Mature_412_residues
TEPFDPGLVKGSSVALAAYQGESEMDVVTVCRTVFRRWYVVVPVLVATVVVLWVTTSKAEPVYQAEAQAIVVGPSVEQNG
EIVQPVNPLSYFNDSLKLLTLTISRIINGEQARDGIRAAGFRADYTVTAPPETTFLEITATDPDPAEATRTAAQVLDQIT
ANTNELQMSVPAGLRYEVQRLFQPVRTSNEPGRSLQLLATIAVLGALAALGLALSVDAAARRRARSRRERPRSHRGAWSR
RDPKRTGGRRHLAGSPKAVWPEPAVWPEPAVQSEPAVQSEPAVQSEPAVWPEPAVQSEPAVQSEPAVQSEPAVQSEPAVQ
SEPAKAPPVPAQAAPVPAGQPAATPMPSKAPKTAAPSVPAQMAREEAGERSWSREGAGGWSFAVASFDGASDDGTGGWSF
DGVGKRRPGAGL

Specific function: One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 7

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the IF-2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006847
- InterPro:   IPR000795
- InterPro:   IPR005225
- InterPro:   IPR000178
- InterPro:   IPR015760
- InterPro:   IPR023115
- InterPro:   IPR004161
- InterPro:   IPR009000 [H]

Pfam domain/function: PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2; PF11987 IF-2; PF04760 IF2_N [H]

EC number: NA

Molecular weight: Translated: 43804; Mature: 43672

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEPFDPGLVKGSSVALAAYQGESEMDVVTVCRTVFRRWYVVVPVLVATVVVLWVTTSKA
CCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
EPVYQAEAQAIVVGPSVEQNGEIVQPVNPLSYFNDSLKLLTLTISRIINGEQARDGIRAA
CCCCCCCCCEEEECCCCCCCCCEECCCCHHHHHCCCHHHHHHHHHHHHCCHHHHCCHHHC
GFRADYTVTAPPETTFLEITATDPDPAEATRTAAQVLDQITANTNELQMSVPAGLRYEVQ
CCCCCEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHH
RLFQPVRTSNEPGRSLQLLATIAVLGALAALGLALSVDAAARRRARSRRERPRSHRGAWS
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCC
RRDPKRTGGRRHLAGSPKAVWPEPAVWPEPAVQSEPAVQSEPAVQSEPAVWPEPAVQSEP
CCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AVQSEPAVQSEPAVQSEPAVQSEPAKAPPVPAQAAPVPAGQPAATPMPSKAPKTAAPSVP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
AQMAREEAGERSWSREGAGGWSFAVASFDGASDDGTGGWSFDGVGKRRPGAGL
HHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TEPFDPGLVKGSSVALAAYQGESEMDVVTVCRTVFRRWYVVVPVLVATVVVLWVTTSKA
CCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
EPVYQAEAQAIVVGPSVEQNGEIVQPVNPLSYFNDSLKLLTLTISRIINGEQARDGIRAA
CCCCCCCCCEEEECCCCCCCCCEECCCCHHHHHCCCHHHHHHHHHHHHCCHHHHCCHHHC
GFRADYTVTAPPETTFLEITATDPDPAEATRTAAQVLDQITANTNELQMSVPAGLRYEVQ
CCCCCEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHH
RLFQPVRTSNEPGRSLQLLATIAVLGALAALGLALSVDAAARRRARSRRERPRSHRGAWS
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCC
RRDPKRTGGRRHLAGSPKAVWPEPAVWPEPAVQSEPAVQSEPAVQSEPAVWPEPAVQSEP
CCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AVQSEPAVQSEPAVQSEPAVQSEPAKAPPVPAQAAPVPAGQPAATPMPSKAPKTAAPSVP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
AQMAREEAGERSWSREGAGGWSFAVASFDGASDDGTGGWSFDGVGKRRPGAGL
HHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA