| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318264
Identifier: 158318264
GI number: 158318264
Start: 7940548
End: 7941216
Strand: Reverse
Name: 158318264
Synonym: Franean1_6529
Alternate gene names: NA
Gene position: 7941216-7940548 (Counterclockwise)
Preceding gene: 158318265
Following gene: 158318261
Centisome position: 88.41
GC content: 65.02
Gene sequence:
>669_bases GTGTGGTTCGGTTGGATCGTGGCGTCGAATCCCCTTGCCGGCTGGTGGGGCAAGAACAAGAGAAACGTGATCATCGCCGG GGTGGCACTTGTGGCCATCTGGTGGCTCGTCGCGGCCAATGGCCGTCCCAAGGTCGAACGGGTCACAATCCCGGATGGCT ATCCGTCAGCCGACCGGGAACTGCTCGTTCAGGCACCCTCCAAACCGAATGACCCGTTGCCCCTGGTAATCATCCTGCAC GATGACAATACGGATGCGAGTTCACTGGAACATGACAGTGACGCGTCGTCGCTGGCGAACCGCCGTGACTTCGCGCTCGC CTTCCCGGAGGCGGTCGCCGGTACCTGGCGACTCGACGACCCGAATGGAGCGGACCAGCAGTACCTGCGCGACGTCGTCC GCTACATGGACGAGGAACGCACCGACATCGACCTGAACCGGATATACGTCTGGGGTATCGGGGAGGGTGCGCGGCTCGCC CTGCTCGCCGCCTGCTCGCCCGGCCCCCCCGTCTACGCGGCGGTGGGCGTCGTGGGACAGTTCGAAGCGGAGCCCGGCCC CACCTGCGACAACGTCACCCAGCACGGGCGGGTTGCCGAGACGGACTGGGACAAAAAGGTCAGCAGCACGTTGTGGGACT TCTCCCGCGACCTTCGCCGGAAGGTCTGA
Upstream 100 bases:
>100_bases AGTGGGCGCCCCGCGGACGGCTGGGAAGTGCCACCCGACGTCGTCCCGCCCGGGTCCGCGTTGACGCGCTGGGCTGAATC CGGCGATTTCCGGGGGCCGG
Downstream 100 bases:
>100_bases TCCAGTTCGGTTCGGTGCGCTGACCAGACAGTTCGCGCTAGTAGCAAAGAACTAGTCATTTAACAGATTGGCCGGCCGCC GGCCCCGCCGGGGACGGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 222; Mature: 222
Protein sequence:
>222_residues MWFGWIVASNPLAGWWGKNKRNVIIAGVALVAIWWLVAANGRPKVERVTIPDGYPSADRELLVQAPSKPNDPLPLVIILH DDNTDASSLEHDSDASSLANRRDFALAFPEAVAGTWRLDDPNGADQQYLRDVVRYMDEERTDIDLNRIYVWGIGEGARLA LLAACSPGPPVYAAVGVVGQFEAEPGPTCDNVTQHGRVAETDWDKKVSSTLWDFSRDLRRKV
Sequences:
>Translated_222_residues MWFGWIVASNPLAGWWGKNKRNVIIAGVALVAIWWLVAANGRPKVERVTIPDGYPSADRELLVQAPSKPNDPLPLVIILH DDNTDASSLEHDSDASSLANRRDFALAFPEAVAGTWRLDDPNGADQQYLRDVVRYMDEERTDIDLNRIYVWGIGEGARLA LLAACSPGPPVYAAVGVVGQFEAEPGPTCDNVTQHGRVAETDWDKKVSSTLWDFSRDLRRKV >Mature_222_residues MWFGWIVASNPLAGWWGKNKRNVIIAGVALVAIWWLVAANGRPKVERVTIPDGYPSADRELLVQAPSKPNDPLPLVIILH DDNTDASSLEHDSDASSLANRRDFALAFPEAVAGTWRLDDPNGADQQYLRDVVRYMDEERTDIDLNRIYVWGIGEGARLA LLAACSPGPPVYAAVGVVGQFEAEPGPTCDNVTQHGRVAETDWDKKVSSTLWDFSRDLRRKV
Specific function: Unknown
COG id: COG3509
COG function: function code Q; Poly(3-hydroxybutyrate) depolymerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24562; Mature: 24562
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWFGWIVASNPLAGWWGKNKRNVIIAGVALVAIWWLVAANGRPKVERVTIPDGYPSADRE CEEEEEEECCCCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCE LLVQAPSKPNDPLPLVIILHDDNTDASSLEHDSDASSLANRRDFALAFPEAVAGTWRLDD EEEECCCCCCCCCEEEEEEECCCCCHHCCCCCCCHHHHHCCCCEEEECHHHHCCEEECCC PNGADQQYLRDVVRYMDEERTDIDLNRIYVWGIGEGARLALLAACSPGPPVYAAVGVVGQ CCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCEEEEEEECCCCCCEEEEECEEEE FEAEPGPTCDNVTQHGRVAETDWDKKVSSTLWDFSRDLRRKV ECCCCCCCCCCHHHCCEECCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MWFGWIVASNPLAGWWGKNKRNVIIAGVALVAIWWLVAANGRPKVERVTIPDGYPSADRE CEEEEEEECCCCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCE LLVQAPSKPNDPLPLVIILHDDNTDASSLEHDSDASSLANRRDFALAFPEAVAGTWRLDD EEEECCCCCCCCCEEEEEEECCCCCHHCCCCCCCHHHHHCCCCEEEECHHHHCCEEECCC PNGADQQYLRDVVRYMDEERTDIDLNRIYVWGIGEGARLALLAACSPGPPVYAAVGVVGQ CCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCEEEEEEECCCCCCEEEEECEEEE FEAEPGPTCDNVTQHGRVAETDWDKKVSSTLWDFSRDLRRKV ECCCCCCCCCCHHHCCEECCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA