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The map label for this gene is 158318184

Identifier: 158318184

GI number: 158318184

Start: 7842908

End: 7843627

Strand: Direct

Name: 158318184

Synonym: Franean1_6449

Alternate gene names: NA

Gene position: 7842908-7843627 (Clockwise)

Preceding gene: 158318183

Following gene: 158318185

Centisome position: 87.32

GC content: 73.89

Gene sequence:

>720_bases
ATGTCGGTTACCTATCGCGAGTACCAGCCGCCGGCCGGTCTGAGGCCTGTGGTGGCCTGCACGTGGGAGCACGAGTCGGA
CGAGGGCCACACACAGCTGGTGGTGCCCGACGGTTGCATGGACCTGATCTGGTTGTCCGAGCGGGAGCTGGTGATCGTCG
GCGCCGACACGGGTCCTCGCGGGGTGAGCCTGCCGGGGCACGCCCGGTCGTCGGGCATCCGCCTGCGCTGCTCCGCGGCC
GGCGCGGTTGTGGGGGTGCCGGCGTCGGAGCTGCGCGACCGGCAGGTCGACGCGGCGTCCGTGTGGGGTGAGCAGGCTGT
GGGACTACAGCAGGCCCTCCCCGTCGCCGCACCCGCGCGGCGGCTGGAGCTGCTGGCCGACGCGGTCGGCCGACGCGACG
CACGACCGGACGTGCTGGTGGCCGCGGCCGCGCGCAGGCTCGCCGTGCCCGGGGCCCGCGTGGCGGATGTCGCCGCCGAA
CTCGGGGTCGGCGAGCGTCAGCTCCACCGCCGCACCCTCGCCGCTGTGGGCTACGGGCCCAAGATGCTCGCCCGGGTCGC
CCGTCTGCGCCGTCTGGTGGGGCTCCGCGACGATTCGCTGTCGTCCCGCGCGTTGAGGGCCGGCTACGCGAGCCAGGCGC
ACATGAACGACGAGGTGCGTCGGCTGACCGGCAGCACACCGGTCCGATTTCTGAAAGACGCCGCGCTGAGCGCTGCCTAG

Upstream 100 bases:

>100_bases
TCCATCGCCCCCTGTACGGTCCGCACCTATAAGCCGAACTCGGAATCCGGCCGGCCCGCGCGCGGCAGCCCGCCGGGCCT
TCGTTGGTACGGTGCTGGGG

Downstream 100 bases:

>100_bases
CGTGGCGGCCATGCCTGTTGACGTCGAGTCCGCCGAACGGTTCATGCTGGCCAACGCCCGCCTGCTGGATCGTCACCTGC
TGGCCGTGCTGCTGCACGAC

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 238

Protein sequence:

>239_residues
MSVTYREYQPPAGLRPVVACTWEHESDEGHTQLVVPDGCMDLIWLSERELVIVGADTGPRGVSLPGHARSSGIRLRCSAA
GAVVGVPASELRDRQVDAASVWGEQAVGLQQALPVAAPARRLELLADAVGRRDARPDVLVAAAARRLAVPGARVADVAAE
LGVGERQLHRRTLAAVGYGPKMLARVARLRRLVGLRDDSLSSRALRAGYASQAHMNDEVRRLTGSTPVRFLKDAALSAA

Sequences:

>Translated_239_residues
MSVTYREYQPPAGLRPVVACTWEHESDEGHTQLVVPDGCMDLIWLSERELVIVGADTGPRGVSLPGHARSSGIRLRCSAA
GAVVGVPASELRDRQVDAASVWGEQAVGLQQALPVAAPARRLELLADAVGRRDARPDVLVAAAARRLAVPGARVADVAAE
LGVGERQLHRRTLAAVGYGPKMLARVARLRRLVGLRDDSLSSRALRAGYASQAHMNDEVRRLTGSTPVRFLKDAALSAA
>Mature_238_residues
SVTYREYQPPAGLRPVVACTWEHESDEGHTQLVVPDGCMDLIWLSERELVIVGADTGPRGVSLPGHARSSGIRLRCSAAG
AVVGVPASELRDRQVDAASVWGEQAVGLQQALPVAAPARRLELLADAVGRRDARPDVLVAAAARRLAVPGARVADVAAEL
GVGERQLHRRTLAAVGYGPKMLARVARLRRLVGLRDDSLSSRALRAGYASQAHMNDEVRRLTGSTPVRFLKDAALSAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018062
- InterPro:   IPR018060 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25456; Mature: 25325

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVTYREYQPPAGLRPVVACTWEHESDEGHTQLVVPDGCMDLIWLSERELVIVGADTGPR
CCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCEEEEEECCCCEEEEECCCCCC
GVSLPGHARSSGIRLRCSAAGAVVGVPASELRDRQVDAASVWGEQAVGLQQALPVAAPAR
CCCCCCCCCCCCEEEEEECCCEEEECCHHHHHHCCCCHHHHHHHHHHCHHHHCCCCCHHH
RLELLADAVGRRDARPDVLVAAAARRLAVPGARVADVAAELGVGERQLHRRTLAAVGYGP
HHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCH
KMLARVARLRRLVGLRDDSLSSRALRAGYASQAHMNDEVRRLTGSTPVRFLKDAALSAA
HHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHCCHHHHHHCCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
SVTYREYQPPAGLRPVVACTWEHESDEGHTQLVVPDGCMDLIWLSERELVIVGADTGPR
CCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCEEEEEECCCCEEEEECCCCCC
GVSLPGHARSSGIRLRCSAAGAVVGVPASELRDRQVDAASVWGEQAVGLQQALPVAAPAR
CCCCCCCCCCCCEEEEEECCCEEEECCHHHHHHCCCCHHHHHHHHHHCHHHHCCCCCHHH
RLELLADAVGRRDARPDVLVAAAARRLAVPGARVADVAAELGVGERQLHRRTLAAVGYGP
HHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCH
KMLARVARLRRLVGLRDDSLSSRALRAGYASQAHMNDEVRRLTGSTPVRFLKDAALSAA
HHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHCCHHHHHHCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7517396 [H]