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The map label for this gene is atoS [C]

Identifier: 158318173

GI number: 158318173

Start: 7826906

End: 7828912

Strand: Reverse

Name: atoS [C]

Synonym: Franean1_6438

Alternate gene names: 158318173

Gene position: 7828912-7826906 (Counterclockwise)

Preceding gene: 158318174

Following gene: 158318170

Centisome position: 87.16

GC content: 73.39

Gene sequence:

>2007_bases
TTGGCGGGCTATGCCGACGTGCCGCCCGGCAGTCTGCTGGACGCCGCGCCGGACGCGATCGTCGGCGTGCGCCCGGACGG
GCGGATCGCGCTGGTGAACGCGCAGGCCGAGCGGCTCTTCGGGTACGACCGGGACGAGCTCGTCGGGCAACCGATGGAGA
TCCTCGTCCCGGAGGCGTTGCGCGGGGCGCACCCGGCCCGCCGCGGCGCGTACCTCTCCGACCCGCGGCCGCGGCCGATG
GGCGCGGGCGTGGAGCTCGCCGCGCGCCGCCGGGACGGCACGGAGTTCCCCGCCGAGATCTCGCTGTCGGCCGTCCAGAC
CGTCGAGGGCATCTTCGTCACGGCCGCGATCCGGGACGTGACGAGCCGCAAGCGGGCCGAGGCCATGTTCCGCGGCCTGC
TGGAGGCGGCGCCGGACGCGATCGTCGGCGTGCGCCCGGACGGGCGGATCGCGCTGGTGAACGCGCAGGCCGAGCGGCTC
TTCGGGTACGACCGGGACGAGCTCGTCGGGCAACCGATGGAGATCCTCGTCCCCGAGTCGGCGCGGCACCTGCACCCGCG
GCACCGCACCCGCTACTTCGACGATCCGCGGCCGCGGCCGATGGGCGCGGGGATGCAGCTCGCCGCGCGCCGCCGGGACG
GCACGGAGTTCCCCGCCGAGATCTCCCTGTCCGCGCTGGAGACCGAGGACGGGCTGCTCGTCTCGGCCGCGATCCGGGAC
GTCACCGACCGGCTGGAGGCGCAGGCGGAGCGCGAGCGGCTGCGGGCCCAAGCGGAGCGGGAACGGCTCGAGGTACAGCT
GCACCAGTCGCAGCGGCTGGAGAGCCTCGGCCAGCTCGCCGGCGGCGTGGCACACGACTTCAACAATCTGCTCGCAGTGA
TCATCAACTACACGGCCTTCGTCGGTGAGGTCGTCGGAACCGCCGCCAGGGACCAGGGCGGCCGGTGGGAGTCCGCCCGC
CGCGACATCGAGCAGGTCCAGCGGGCGGCCGACCGGGCCGCCCAGCTCACCCACCAGCTGCTCGCCTTCGGCCGGCGCGA
GGTGGTCCAGCCGCGCCCGCTGGACCTCAACGGGGTCGTCCACGACATGGAGCAGTTGCTGCGCCGCACCCTCGGCGAGC
ATGTGGAGCTGCACACCTCCGCCCACCCGGGCCTGTGGACGGTGCTGGCCGACGTGGGCCAGATCGAGCAGGTGCTGGTG
AACCTCGCCGTCAACGCGCGGGACGCGATGCCCGGTGGCGGCACGCTCACCATCGACACCTCGAACGTGAGCGTCGACGA
CGAGACGGCGGCCGCCCACCCGGGGCTGTGCAGCGGGCGCTTCGTGCACCTGCGGGTCAGCGACAGCGGGACGGGCATGT
CGCCGGAGGTCGCCGCGCGCGCGTTCGAGCCGTTCTTCACGACCAAGACGAAGGGCGAGGGCTCCGGGCTCGGCCTGGCC
ACCGTCTACGGGATCATCACCCAGGCGGGCGGGCACGTGGAGATCCTGTCGACGGCCAACGTCGGCACCACCGTCAGCGC
GCTGCTGCCGGCCGTCGACGGCGCCGTCCCGGCGGCTGAGGAGCAGCTCGCCGACGGTGAGCTGTTCGGCGGCGAGACGA
TCATGGTGGTCGAGGACGAGCCGGCCATGCGCGAGCTCACCCGTCGCATCCTTGCCCGCAATGGCTACCAGGTGATCATC
GCGGCGAGCGGGCCCGAGGCGATCTCGCTGGCGTCGACGACGCGGGAGGAGATCCACCTGCTGCTGACCGACGTGGTCAT
GCCGCAGCTGCTCGGCAGCGAGGTCGCCGAGCGGATCCGCCAGCAGCGGCAGGACCTGCGCGTCCTCTACATGTCCGGGT
ACGCCCAGCCCGTGCTTGCCCGGAACGGGACGCTCGCCCCGGGGCTTGCCCTGCTGACCAAGCCGTTCTCCGAGCGGGTG
CTGCTGTCGAAGGTGCGGGAGGTTCTGGATTCCCTCAGCGGCCCTTTCTCCCCGCACGGCGCGCCGCCCTGGCCCCGCGA
CAGCTGA

Upstream 100 bases:

>100_bases
GCACGGTCCGACTGATACCCGTTCGCGGTCGAACGTCCCGTGCCCTCCGGGCTACCATGTGTCATTGCGTGACACGTCGT
TCACGATCTGGGGGTAGTCG

Downstream 100 bases:

>100_bases
CGGCGCCTACCCGCCCGCCTGGGACGGCGCCCGCGGCAGCCGCACCGCCGCGGACCACGCGCTGGTGACCGCGTCCGGGC
TCAGCCGGGCGCCGAGGACG

Product: PAS/PAC sensor hybrid histidine kinase

Products: NA

Alternate protein names: Blue-light-activated histidine kinase; Response regulator [H]

Number of amino acids: Translated: 668; Mature: 667

Protein sequence:

>668_residues
MAGYADVPPGSLLDAAPDAIVGVRPDGRIALVNAQAERLFGYDRDELVGQPMEILVPEALRGAHPARRGAYLSDPRPRPM
GAGVELAARRRDGTEFPAEISLSAVQTVEGIFVTAAIRDVTSRKRAEAMFRGLLEAAPDAIVGVRPDGRIALVNAQAERL
FGYDRDELVGQPMEILVPESARHLHPRHRTRYFDDPRPRPMGAGMQLAARRRDGTEFPAEISLSALETEDGLLVSAAIRD
VTDRLEAQAERERLRAQAERERLEVQLHQSQRLESLGQLAGGVAHDFNNLLAVIINYTAFVGEVVGTAARDQGGRWESAR
RDIEQVQRAADRAAQLTHQLLAFGRREVVQPRPLDLNGVVHDMEQLLRRTLGEHVELHTSAHPGLWTVLADVGQIEQVLV
NLAVNARDAMPGGGTLTIDTSNVSVDDETAAAHPGLCSGRFVHLRVSDSGTGMSPEVAARAFEPFFTTKTKGEGSGLGLA
TVYGIITQAGGHVEILSTANVGTTVSALLPAVDGAVPAAEEQLADGELFGGETIMVVEDEPAMRELTRRILARNGYQVII
AASGPEAISLASTTREEIHLLLTDVVMPQLLGSEVAERIRQQRQDLRVLYMSGYAQPVLARNGTLAPGLALLTKPFSERV
LLSKVREVLDSLSGPFSPHGAPPWPRDS

Sequences:

>Translated_668_residues
MAGYADVPPGSLLDAAPDAIVGVRPDGRIALVNAQAERLFGYDRDELVGQPMEILVPEALRGAHPARRGAYLSDPRPRPM
GAGVELAARRRDGTEFPAEISLSAVQTVEGIFVTAAIRDVTSRKRAEAMFRGLLEAAPDAIVGVRPDGRIALVNAQAERL
FGYDRDELVGQPMEILVPESARHLHPRHRTRYFDDPRPRPMGAGMQLAARRRDGTEFPAEISLSALETEDGLLVSAAIRD
VTDRLEAQAERERLRAQAERERLEVQLHQSQRLESLGQLAGGVAHDFNNLLAVIINYTAFVGEVVGTAARDQGGRWESAR
RDIEQVQRAADRAAQLTHQLLAFGRREVVQPRPLDLNGVVHDMEQLLRRTLGEHVELHTSAHPGLWTVLADVGQIEQVLV
NLAVNARDAMPGGGTLTIDTSNVSVDDETAAAHPGLCSGRFVHLRVSDSGTGMSPEVAARAFEPFFTTKTKGEGSGLGLA
TVYGIITQAGGHVEILSTANVGTTVSALLPAVDGAVPAAEEQLADGELFGGETIMVVEDEPAMRELTRRILARNGYQVII
AASGPEAISLASTTREEIHLLLTDVVMPQLLGSEVAERIRQQRQDLRVLYMSGYAQPVLARNGTLAPGLALLTKPFSERV
LLSKVREVLDSLSGPFSPHGAPPWPRDS
>Mature_667_residues
AGYADVPPGSLLDAAPDAIVGVRPDGRIALVNAQAERLFGYDRDELVGQPMEILVPEALRGAHPARRGAYLSDPRPRPMG
AGVELAARRRDGTEFPAEISLSAVQTVEGIFVTAAIRDVTSRKRAEAMFRGLLEAAPDAIVGVRPDGRIALVNAQAERLF
GYDRDELVGQPMEILVPESARHLHPRHRTRYFDDPRPRPMGAGMQLAARRRDGTEFPAEISLSALETEDGLLVSAAIRDV
TDRLEAQAERERLRAQAERERLEVQLHQSQRLESLGQLAGGVAHDFNNLLAVIINYTAFVGEVVGTAARDQGGRWESARR
DIEQVQRAADRAAQLTHQLLAFGRREVVQPRPLDLNGVVHDMEQLLRRTLGEHVELHTSAHPGLWTVLADVGQIEQVLVN
LAVNARDAMPGGGTLTIDTSNVSVDDETAAAHPGLCSGRFVHLRVSDSGTGMSPEVAARAFEPFFTTKTKGEGSGLGLAT
VYGIITQAGGHVEILSTANVGTTVSALLPAVDGAVPAAEEQLADGELFGGETIMVVEDEPAMRELTRRILARNGYQVIIA
ASGPEAISLASTTREEIHLLLTDVVMPQLLGSEVAERIRQQRQDLRVLYMSGYAQPVLARNGTLAPGLALLTKPFSERVL
LSKVREVLDSLSGPFSPHGAPPWPRDS

Specific function: Photosensitive kinase and response regulator that is involved in increased bacterial virulence upon exposure to light [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788549, Length=379, Percent_Identity=26.1213720316623, Blast_Score=104, Evalue=2e-23,
Organism=Escherichia coli, GI1790436, Length=261, Percent_Identity=29.5019157088123, Blast_Score=98, Evalue=2e-21,
Organism=Escherichia coli, GI1788713, Length=278, Percent_Identity=29.8561151079137, Blast_Score=81, Evalue=2e-16,
Organism=Escherichia coli, GI87081921, Length=164, Percent_Identity=27.4390243902439, Blast_Score=67, Evalue=5e-12,
Organism=Escherichia coli, GI87081816, Length=299, Percent_Identity=24.7491638795987, Blast_Score=64, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR011006
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082
- InterPro:   IPR001789 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS; PF00072 Response_reg [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 72183; Mature: 72052

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: PS50112 PAS ; PS50113 PAC ; PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGYADVPPGSLLDAAPDAIVGVRPDGRIALVNAQAERLFGYDRDELVGQPMEILVPEAL
CCCCCCCCCCCHHHCCCCCEEEECCCCCEEEEECCHHHHCCCCHHHHCCCCHHHHCCHHH
RGAHPARRGAYLSDPRPRPMGAGVELAARRRDGTEFPAEISLSAVQTVEGIFVTAAIRDV
CCCCCHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
TSRKRAEAMFRGLLEAAPDAIVGVRPDGRIALVNAQAERLFGYDRDELVGQPMEILVPES
HHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEECCHHHHCCCCHHHHCCCCCEEECCCC
ARHLHPRHRTRYFDDPRPRPMGAGMQLAARRRDGTEFPAEISLSALETEDGLLVSAAIRD
HHHCCCHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCEEEEEEECCCCEEHHHHHHH
VTDRLEAQAERERLRAQAERERLEVQLHQSQRLESLGQLAGGVAHDFNNLLAVIINYTAF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGEVVGTAARDQGGRWESARRDIEQVQRAADRAAQLTHQLLAFGRREVVQPRPLDLNGVV
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
HDMEQLLRRTLGEHVELHTSAHPGLWTVLADVGQIEQVLVNLAVNARDAMPGGGTLTIDT
HHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEC
SNVSVDDETAAAHPGLCSGRFVHLRVSDSGTGMSPEVAARAFEPFFTTKTKGEGSGLGLA
CCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHCCHHCCCCCCCCCCCHHH
TVYGIITQAGGHVEILSTANVGTTVSALLPAVDGAVPAAEEQLADGELFGGETIMVVEDE
HHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCHHHHHCCCCEECCCEEEEECCC
PAMRELTRRILARNGYQVIIAASGPEAISLASTTREEIHLLLTDVVMPQLLGSEVAERIR
HHHHHHHHHHHHCCCCEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQRQDLRVLYMSGYAQPVLARNGTLAPGLALLTKPFSERVLLSKVREVLDSLSGPFSPHG
HHHHHHEEEEECCCCCCHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCC
APPWPRDS
CCCCCCCC
>Mature Secondary Structure 
AGYADVPPGSLLDAAPDAIVGVRPDGRIALVNAQAERLFGYDRDELVGQPMEILVPEAL
CCCCCCCCCCHHHCCCCCEEEECCCCCEEEEECCHHHHCCCCHHHHCCCCHHHHCCHHH
RGAHPARRGAYLSDPRPRPMGAGVELAARRRDGTEFPAEISLSAVQTVEGIFVTAAIRDV
CCCCCHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
TSRKRAEAMFRGLLEAAPDAIVGVRPDGRIALVNAQAERLFGYDRDELVGQPMEILVPES
HHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEECCHHHHCCCCHHHHCCCCCEEECCCC
ARHLHPRHRTRYFDDPRPRPMGAGMQLAARRRDGTEFPAEISLSALETEDGLLVSAAIRD
HHHCCCHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCEEEEEEECCCCEEHHHHHHH
VTDRLEAQAERERLRAQAERERLEVQLHQSQRLESLGQLAGGVAHDFNNLLAVIINYTAF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGEVVGTAARDQGGRWESARRDIEQVQRAADRAAQLTHQLLAFGRREVVQPRPLDLNGVV
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
HDMEQLLRRTLGEHVELHTSAHPGLWTVLADVGQIEQVLVNLAVNARDAMPGGGTLTIDT
HHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEC
SNVSVDDETAAAHPGLCSGRFVHLRVSDSGTGMSPEVAARAFEPFFTTKTKGEGSGLGLA
CCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHCCHHCCCCCCCCCCCHHH
TVYGIITQAGGHVEILSTANVGTTVSALLPAVDGAVPAAEEQLADGELFGGETIMVVEDE
HHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCHHHHHCCCCEECCCEEEEECCC
PAMRELTRRILARNGYQVIIAASGPEAISLASTTREEIHLLLTDVVMPQLLGSEVAERIR
HHHHHHHHHHHHCCCCEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQRQDLRVLYMSGYAQPVLARNGTLAPGLALLTKPFSERVLLSKVREVLDSLSGPFSPHG
HHHHHHEEEEECCCCCCHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCC
APPWPRDS
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA