| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318166
Identifier: 158318166
GI number: 158318166
Start: 7811205
End: 7813370
Strand: Reverse
Name: 158318166
Synonym: Franean1_6431
Alternate gene names: NA
Gene position: 7813370-7811205 (Counterclockwise)
Preceding gene: 158318169
Following gene: 158318165
Centisome position: 86.99
GC content: 75.25
Gene sequence:
>2166_bases ATGGCTGATCCCGCGGGGACGGGCCGGCACCGGCTCGCCGAGCTGACGGCCGCCGCGACCGCGGCCGAGGTGCCGCCGGC CGGGCTCTGTCGTGATCTCGCGCTCGCCTACGAGAAGGCGGGCGATCCGGCCGCCGCCGTGCGCTGGGCACTGGCCACGA CCGACGCCGGAGGCGACCTGACCTGCTGGACGGTCGCCGCCGGCGTCCTGCGCCGCGTCTCGGCCGGGGCGGTCGCGTCA GCCGTGTCACCCGGGGCGGCTGCGTCGGTCGGAGCGGCTGTGCCAGCCCGGGCGGCCGTGGCCGCCGCTGCGGGAGGGGC GGTCATGCCGTCGCCCGTCGCGGGCCACACGGCGCGCTCGGCGCGGGTCGCCGTGCTCGGCAGCTACACGACCGCCCAGC TCGCGGCGCTCCTGCCGCTCGCAGCCGCGCGCGCCGGGGTGGCCGTCGAGGTCTACGAGTGCGGGTACGGCCAGTACCGG CAGGAGGTGCTCGACCCGGGCAGCGGCCTGTACCGCTTCGGGCCGGACGTCGTGATCCTCGCGGTCCACGAGGGCGAGGC CGCGCTTCCAGCCCTCGCCGAGGACCCCGAGCGCGCGGTCGCCGCCGAAGTCGGCCGCTGGACATCGCTGTGGGAGATCA TCATCTCCCGGTTGGATGCCCGCGTCATCCAGCACACCTTCGTCGTCCCGGAGACGGAGGCGCTCGGGCACCTGGCCCTG CGCATCCCCGGGTCGCGGTCGTCGATGCTCGCCGCGGTCAACGCGGCGCTCGGCCGCGCGGCGGCGGGCGGTCAGGTCGC CTTCGTCGACTGTGAGCGGCTGGCCGCCACGGTCGGCAAACGATCCTGGTTCGACCCGCGGTACTGGCACCGCGCGAAGC AGGCCGTCTCGCTCGCGCACGTGCCCGCGCTGGCCCGTCACACCGCGGCGGTGCTCGGCGCGCAGCTGGGCACCAGCCGT AAATGCCTGGTGCTCGACCTCGACAACACGCTGTGGGGCGGGGTGCTCGGGGAGGAGGGCCTCGCCGGCATCGCGCTCGG GGACGGGCCGGTCGGCGAGGCTTTCTCCGCGTTCCAGGAGTACATCGGCCGGCTCCGTGCCCGCGGCGTGATCCTCGCCG TCTGCTCGAAGAACAACGAGGCGGACGCGCGCGAGGCGTTCGAGCGGCACCCGGCGATGCGGCTGCGGCTGGACGACATC GCCATGTTCAGCGCCTCCTGGGAGGACAAGCCGACCCAGATCCGGCGCATCGCGAGCACCCTCGGGATCGGTCTGGACTC CCTGGTCTTCGTCGACGACAACCCGGCCGAGCGCGAGGTGGTCCGCCAACTCGTGCCCGAGGTGGACGTCATCGCCCTGC CGCGGGACCCGCACGGCTACGTGCGCGCGGTCGCCGACTACCCGTTCTTCGAACCGGCCGCCCTGACCACCGAGGACACC GCCCGCACGGAGCAGTACCGGGCGCGGGCCCGGGCGGCGGAGCTCGCCGCGTCCGCGACCTCGCTGGAGGAATTCCACCG CGGGCTGGAGATGGTCGCGACCGTCGTACCCCTCGACGAGCTGACGCTGCCCCGGGTCGTCCAGCTCATCGGGAAGACCA ACCAGTTCAACCTGACCACCCGGCGCCGCGGGGAGGCCGAGGTCGCCGAGCTGGCCGCGGACTCGTCCACCGCGGTGATC TGCGTTCGGCTGGCCGACCGGTTCGCCGACCACGGCCTCGTCGCGGTCGTCATCGCCCGGCGTGCCGCCGAGCCCGGCGG GGCCGTCCTCGACGTCGACACCTGGCTGATGAGCTGCCGGGTCATCGGCCGGACGCTGGAGGACGAGATCGCCGGGCTGA TCGTGGCGGAGGCCCGGCGGCTGGGTTGTTCCTCCGTGCGGGGGCACTACCTGCCGACCGCGAAGAACGCGCTGGTGGCC GACCTGTACCCGCGGCTGGGCTTCCGGCCGGACCCCGCGGCTCCCGCCGACGCCGGCCGCGTCGCCCCGGCCGGTGGCCC CGGTGTGGCTCCCGCCTATGGCACCGGCGCGGGGGCCACCCGCTGGGTGCTGCCGGTCGCGAGCGCCCTGAACCGGCCCG GGCTCATCCGGGTCGTCGACGCTCGCGCGGGCGGGGCCGCTGTCGCGAGCGCATCCGTGCGGACGATGGAGGAGGTGGCC GGCTGA
Upstream 100 bases:
>100_bases GCGCATATCCGAAGACCCTTACGTAAGGGTAGGGTTGAAGTGTGTGCATCTCGAGGACGGGGGCGTCCGGAGCGCGGCGC CTGGGGGAGGAGTTCGATCA
Downstream 100 bases:
>100_bases TGGTGCAGGAGCGCCTCGCCCAGGTCTTCCGGGAGATCTTCAGCGACGACGACCTGGTCGTCACGGACGCCACCACGGCG GCGGACGTGCCCGGCTGGGA
Product: FkbH like protein
Products: NA
Alternate protein names: FkbH Domain-Containing Protein; Modular Polyketide Synthase; FkbH-Like Protein; Amino Acid Adenylation Domain Protein; Phosphatase IIIC; FkbH Domain Protein; HAD Family Phosphatase FbkH; Non-Ribosomal Peptide Synthetase; Involved In Methoxymalonyl-ACP Biosynthesis; FkbH-Protein; Polyketide Synthase Protein; Polyketide Synthase Subunit; Methoxymalonate Biosynthesis Protein; Modular Polyketide Synthase Type I PKS; HAD-Superfamily Protein; FkbH Domain; Had-Superfamily Phosphatase Subfamily IIIcFkbh-Like Domain; HAD-Superfamily Phosphatase Subfamily IIIC; Fkbh Like Protein; Peptide Synthetase; HAD Family Phosphatase
Number of amino acids: Translated: 721; Mature: 720
Protein sequence:
>721_residues MADPAGTGRHRLAELTAAATAAEVPPAGLCRDLALAYEKAGDPAAAVRWALATTDAGGDLTCWTVAAGVLRRVSAGAVAS AVSPGAAASVGAAVPARAAVAAAAGGAVMPSPVAGHTARSARVAVLGSYTTAQLAALLPLAAARAGVAVEVYECGYGQYR QEVLDPGSGLYRFGPDVVILAVHEGEAALPALAEDPERAVAAEVGRWTSLWEIIISRLDARVIQHTFVVPETEALGHLAL RIPGSRSSMLAAVNAALGRAAAGGQVAFVDCERLAATVGKRSWFDPRYWHRAKQAVSLAHVPALARHTAAVLGAQLGTSR KCLVLDLDNTLWGGVLGEEGLAGIALGDGPVGEAFSAFQEYIGRLRARGVILAVCSKNNEADAREAFERHPAMRLRLDDI AMFSASWEDKPTQIRRIASTLGIGLDSLVFVDDNPAEREVVRQLVPEVDVIALPRDPHGYVRAVADYPFFEPAALTTEDT ARTEQYRARARAAELAASATSLEEFHRGLEMVATVVPLDELTLPRVVQLIGKTNQFNLTTRRRGEAEVAELAADSSTAVI CVRLADRFADHGLVAVVIARRAAEPGGAVLDVDTWLMSCRVIGRTLEDEIAGLIVAEARRLGCSSVRGHYLPTAKNALVA DLYPRLGFRPDPAAPADAGRVAPAGGPGVAPAYGTGAGATRWVLPVASALNRPGLIRVVDARAGGAAVASASVRTMEEVA G
Sequences:
>Translated_721_residues MADPAGTGRHRLAELTAAATAAEVPPAGLCRDLALAYEKAGDPAAAVRWALATTDAGGDLTCWTVAAGVLRRVSAGAVAS AVSPGAAASVGAAVPARAAVAAAAGGAVMPSPVAGHTARSARVAVLGSYTTAQLAALLPLAAARAGVAVEVYECGYGQYR QEVLDPGSGLYRFGPDVVILAVHEGEAALPALAEDPERAVAAEVGRWTSLWEIIISRLDARVIQHTFVVPETEALGHLAL RIPGSRSSMLAAVNAALGRAAAGGQVAFVDCERLAATVGKRSWFDPRYWHRAKQAVSLAHVPALARHTAAVLGAQLGTSR KCLVLDLDNTLWGGVLGEEGLAGIALGDGPVGEAFSAFQEYIGRLRARGVILAVCSKNNEADAREAFERHPAMRLRLDDI AMFSASWEDKPTQIRRIASTLGIGLDSLVFVDDNPAEREVVRQLVPEVDVIALPRDPHGYVRAVADYPFFEPAALTTEDT ARTEQYRARARAAELAASATSLEEFHRGLEMVATVVPLDELTLPRVVQLIGKTNQFNLTTRRRGEAEVAELAADSSTAVI CVRLADRFADHGLVAVVIARRAAEPGGAVLDVDTWLMSCRVIGRTLEDEIAGLIVAEARRLGCSSVRGHYLPTAKNALVA DLYPRLGFRPDPAAPADAGRVAPAGGPGVAPAYGTGAGATRWVLPVASALNRPGLIRVVDARAGGAAVASASVRTMEEVA G >Mature_720_residues ADPAGTGRHRLAELTAAATAAEVPPAGLCRDLALAYEKAGDPAAAVRWALATTDAGGDLTCWTVAAGVLRRVSAGAVASA VSPGAAASVGAAVPARAAVAAAAGGAVMPSPVAGHTARSARVAVLGSYTTAQLAALLPLAAARAGVAVEVYECGYGQYRQ EVLDPGSGLYRFGPDVVILAVHEGEAALPALAEDPERAVAAEVGRWTSLWEIIISRLDARVIQHTFVVPETEALGHLALR IPGSRSSMLAAVNAALGRAAAGGQVAFVDCERLAATVGKRSWFDPRYWHRAKQAVSLAHVPALARHTAAVLGAQLGTSRK CLVLDLDNTLWGGVLGEEGLAGIALGDGPVGEAFSAFQEYIGRLRARGVILAVCSKNNEADAREAFERHPAMRLRLDDIA MFSASWEDKPTQIRRIASTLGIGLDSLVFVDDNPAEREVVRQLVPEVDVIALPRDPHGYVRAVADYPFFEPAALTTEDTA RTEQYRARARAAELAASATSLEEFHRGLEMVATVVPLDELTLPRVVQLIGKTNQFNLTTRRRGEAEVAELAADSSTAVIC VRLADRFADHGLVAVVIARRAAEPGGAVLDVDTWLMSCRVIGRTLEDEIAGLIVAEARRLGCSSVRGHYLPTAKNALVAD LYPRLGFRPDPAAPADAGRVAPAGGPGVAPAYGTGAGATRWVLPVASALNRPGLIRVVDARAGGAAVASASVRTMEEVAG
Specific function: Unknown
COG id: COG3882
COG function: function code Q; Predicted enzyme involved in methoxymalonyl-ACP biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 75163; Mature: 75032
Theoretical pI: Translated: 6.46; Mature: 6.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADPAGTGRHRLAELTAAATAAEVPPAGLCRDLALAYEKAGDPAAAVRWALATTDAGGDL CCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHEEEEEECCCCCCC TCWTVAAGVLRRVSAGAVASAVSPGAAASVGAAVPARAAVAAAAGGAVMPSPVAGHTARS HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCC ARVAVLGSYTTAQLAALLPLAAARAGVAVEVYECGYGQYRQEVLDPGSGLYRFGPDVVIL CEEEEEECCHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHCCCCCCCEEECCCEEEE AVHEGEAALPALAEDPERAVAAEVGRWTSLWEIIISRLDARVIQHTFVVPETEALGHLAL EEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHCEEEE RIPGSRSSMLAAVNAALGRAAAGGQVAFVDCERLAATVGKRSWFDPRYWHRAKQAVSLAH ECCCCCHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH VPALARHTAAVLGAQLGTSRKCLVLDLDNTLWGGVLGEEGLAGIALGDGPVGEAFSAFQE HHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHCCCCCCCCCEEEEECCCCCHHHHHHHHH YIGRLRARGVILAVCSKNNEADAREAFERHPAMRLRLDDIAMFSASWEDKPTQIRRIAST HHHHHHHCCEEEEEECCCCCHHHHHHHHHCCCEEEEEHHHHEEECCCCCCHHHHHHHHHH LGIGLDSLVFVDDNPAEREVVRQLVPEVDVIALPRDPHGYVRAVADYPFFEPAALTTEDT HCCCCCEEEEECCCCHHHHHHHHHCCCCCEEEECCCCCHHHEEECCCCCCCCCCCCCCHH ARTEQYRARARAAELAASATSLEEFHRGLEMVATVVPLDELTLPRVVQLIGKTNQFNLTT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHCCCCCEEEEE RRRGEAEVAELAADSSTAVICVRLADRFADHGLVAVVIARRAAEPGGAVLDVDTWLMSCR CCCCCHHHHHHHCCCCCEEEEEEHHHHHCCCCHHHHHHHHHCCCCCCCEEEHHHHHHHHH VIGRTLEDEIAGLIVAEARRLGCSSVRGHYLPTAKNALVADLYPRLGFRPDPAAPADAGR HHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCC VAPAGGPGVAPAYGTGAGATRWVLPVASALNRPGLIRVVDARAGGAAVASASVRTMEEVA CCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHC G C >Mature Secondary Structure ADPAGTGRHRLAELTAAATAAEVPPAGLCRDLALAYEKAGDPAAAVRWALATTDAGGDL CCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHEEEEEECCCCCCC TCWTVAAGVLRRVSAGAVASAVSPGAAASVGAAVPARAAVAAAAGGAVMPSPVAGHTARS HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCC ARVAVLGSYTTAQLAALLPLAAARAGVAVEVYECGYGQYRQEVLDPGSGLYRFGPDVVIL CEEEEEECCHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHCCCCCCCEEECCCEEEE AVHEGEAALPALAEDPERAVAAEVGRWTSLWEIIISRLDARVIQHTFVVPETEALGHLAL EEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHCEEEE RIPGSRSSMLAAVNAALGRAAAGGQVAFVDCERLAATVGKRSWFDPRYWHRAKQAVSLAH ECCCCCHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH VPALARHTAAVLGAQLGTSRKCLVLDLDNTLWGGVLGEEGLAGIALGDGPVGEAFSAFQE HHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHCCCCCCCCCEEEEECCCCCHHHHHHHHH YIGRLRARGVILAVCSKNNEADAREAFERHPAMRLRLDDIAMFSASWEDKPTQIRRIAST HHHHHHHCCEEEEEECCCCCHHHHHHHHHCCCEEEEEHHHHEEECCCCCCHHHHHHHHHH LGIGLDSLVFVDDNPAEREVVRQLVPEVDVIALPRDPHGYVRAVADYPFFEPAALTTEDT HCCCCCEEEEECCCCHHHHHHHHHCCCCCEEEECCCCCHHHEEECCCCCCCCCCCCCCHH ARTEQYRARARAAELAASATSLEEFHRGLEMVATVVPLDELTLPRVVQLIGKTNQFNLTT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHCCCCCEEEEE RRRGEAEVAELAADSSTAVICVRLADRFADHGLVAVVIARRAAEPGGAVLDVDTWLMSCR CCCCCHHHHHHHCCCCCEEEEEEHHHHHCCCCHHHHHHHHHCCCCCCCEEEHHHHHHHHH VIGRTLEDEIAGLIVAEARRLGCSSVRGHYLPTAKNALVADLYPRLGFRPDPAAPADAGR HHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCC VAPAGGPGVAPAYGTGAGATRWVLPVASALNRPGLIRVVDARAGGAAVASASVRTMEEVA CCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHC G C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA