Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158318072

Identifier: 158318072

GI number: 158318072

Start: 7692045

End: 7693166

Strand: Direct

Name: 158318072

Synonym: Franean1_6333

Alternate gene names: NA

Gene position: 7692045-7693166 (Clockwise)

Preceding gene: 158318070

Following gene: 158318073

Centisome position: 85.64

GC content: 70.14

Gene sequence:

>1122_bases
GTGAGAGCGGGCAGGATCAGCGCCGCGGCCTCGGTTCCCGGCACGACGGGGTCCGCCGGGCTGCGCGGACGATCGCAGTC
CTCTCCGACGACCACACCCGCTCGGTCTACGGCCAGGCCGAATGGCAGGCCGCCTGGACTGCGGATCCCTCCGGGGCGGC
ACACGCTCCTCGTGATGCGGGTAGCTGACTGCGACCGGCCCGGCCTGCTCGCCCAACTGGTATCCACCGACCTGTTCGCA
CACCCGGAACGGCAGGCACGGGTGGAACTGCTCCGCGCGGCGACGCTCGCTCGCTCCGGTGGCCGGGCGAAACCGCAGCA
CGCTCCACCGTTCCCACCTGATCGGCGGGCGATGCCCGTGCGGCCGTCGTTCCCTGGCGGCCGGCCGGACGTGTGGAACG
TCCCGCCACGGCCGGCTCACTTCGTCGGCCGTACCGATCTTCTCGATCAGGTTCACCAGCAGCTCGGCGACGCGGGCGCG
GTCGCGGTCTGCGCCCTGCACGGCCTCGGCGGGATCGGGAAAACCGCCCTCGCGATCGAGTACGCCCACCGCCACCCGCA
CAGCTACGACCTGATCTGGTGGATAGCTGCCGAAGACCCACAGCTGATCCCGGGGCATGTGTCCACCCTCGGCCGGGAAC
TCGGCCTGCCCGACGGCGCGGACTGGCCCGCCGTCCTCAACGTACTGCGACGCGAACGGCTGCGTTGGCTGCTCATCCTC
GACAACATCGAAGACCGGAACGTCATCAGCCCGTTCCGGCCGACGGATCACCTCGGCCGGCTACTCGTCACCTCACGACG
CACCGGCCTCGACGCTTTCGGTCCACAGCTCGCCGTACCCGAACTTCCCCGACGAGACGCGGTCGACCTGCTCACCCGGC
GGGTACCCGCCATCGACACCGGGACGGCCGGGCAGATCGCGGAACTTCTCGGAGACCTGCCCCTAGCCGTGGAACAAGCC
GCCGGCTACCTCACCCAAACCGGCATGCCCTCCGACGACTACGTCGAGCTACTCCGCGGGCGGCTCGGGGAGATGCTGCA
CCGCGGGTGGGTCGCCGACCGGCCCGACATCACCACCGCCAACCTGTGGAACCTGTCCCTGACCCAATGCCGTGAAGCTT
AA

Upstream 100 bases:

>100_bases
AATGGAGGTCAGGACCAGGGGAAGAGGGTGGGATTCCAGGAGTTCCTCGATCCGGGTGGCGAGCAGGCCACGTTGGTCCA
GCACGGAGCGCAGCGAGCGG

Downstream 100 bases:

>100_bases
TTCGATCTTGAATGGTTGATGTTCGCTGTTCGTGGTTGGCGGGTTGGTACGGCGTGGCGGCGTGGCCTCGGTGCCGCTGG
GTGGTTTGGTCACGGTTCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NB-ARC Domain Protein; TPR Repeat-Containing Protein; TIR Protein; Tetratricopeptide Repeat Family; NTPase-Like Protein; SARP Family Transcriptional Regulator

Number of amino acids: Translated: 373; Mature: 373

Protein sequence:

>373_residues
MRAGRISAAASVPGTTGSAGLRGRSQSSPTTTPARSTARPNGRPPGLRIPPGRHTLLVMRVADCDRPGLLAQLVSTDLFA
HPERQARVELLRAATLARSGGRAKPQHAPPFPPDRRAMPVRPSFPGGRPDVWNVPPRPAHFVGRTDLLDQVHQQLGDAGA
VAVCALHGLGGIGKTALAIEYAHRHPHSYDLIWWIAAEDPQLIPGHVSTLGRELGLPDGADWPAVLNVLRRERLRWLLIL
DNIEDRNVISPFRPTDHLGRLLVTSRRTGLDAFGPQLAVPELPRRDAVDLLTRRVPAIDTGTAGQIAELLGDLPLAVEQA
AGYLTQTGMPSDDYVELLRGRLGEMLHRGWVADRPDITTANLWNLSLTQCREA

Sequences:

>Translated_373_residues
MRAGRISAAASVPGTTGSAGLRGRSQSSPTTTPARSTARPNGRPPGLRIPPGRHTLLVMRVADCDRPGLLAQLVSTDLFA
HPERQARVELLRAATLARSGGRAKPQHAPPFPPDRRAMPVRPSFPGGRPDVWNVPPRPAHFVGRTDLLDQVHQQLGDAGA
VAVCALHGLGGIGKTALAIEYAHRHPHSYDLIWWIAAEDPQLIPGHVSTLGRELGLPDGADWPAVLNVLRRERLRWLLIL
DNIEDRNVISPFRPTDHLGRLLVTSRRTGLDAFGPQLAVPELPRRDAVDLLTRRVPAIDTGTAGQIAELLGDLPLAVEQA
AGYLTQTGMPSDDYVELLRGRLGEMLHRGWVADRPDITTANLWNLSLTQCREA
>Mature_373_residues
MRAGRISAAASVPGTTGSAGLRGRSQSSPTTTPARSTARPNGRPPGLRIPPGRHTLLVMRVADCDRPGLLAQLVSTDLFA
HPERQARVELLRAATLARSGGRAKPQHAPPFPPDRRAMPVRPSFPGGRPDVWNVPPRPAHFVGRTDLLDQVHQQLGDAGA
VAVCALHGLGGIGKTALAIEYAHRHPHSYDLIWWIAAEDPQLIPGHVSTLGRELGLPDGADWPAVLNVLRRERLRWLLIL
DNIEDRNVISPFRPTDHLGRLLVTSRRTGLDAFGPQLAVPELPRRDAVDLLTRRVPAIDTGTAGQIAELLGDLPLAVEQA
AGYLTQTGMPSDDYVELLRGRLGEMLHRGWVADRPDITTANLWNLSLTQCREA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40499; Mature: 40499

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAGRISAAASVPGTTGSAGLRGRSQSSPTTTPARSTARPNGRPPGLRIPPGRHTLLVMR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEE
VADCDRPGLLAQLVSTDLFAHPERQARVELLRAATLARSGGRAKPQHAPPFPPDRRAMPV
ECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
RPSFPGGRPDVWNVPPRPAHFVGRTDLLDQVHQQLGDAGAVAVCALHGLGGIGKTALAIE
CCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHEEE
YAHRHPHSYDLIWWIAAEDPQLIPGHVSTLGRELGLPDGADWPAVLNVLRRERLRWLLIL
HHHCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCEEEEEE
DNIEDRNVISPFRPTDHLGRLLVTSRRTGLDAFGPQLAVPELPRRDAVDLLTRRVPAIDT
ECCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCHHHHHHHHHHCCCCCC
GTAGQIAELLGDLPLAVEQAAGYLTQTGMPSDDYVELLRGRLGEMLHRGWVADRPDITTA
CCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
NLWNLSLTQCREA
CCCCCHHHHHHCC
>Mature Secondary Structure
MRAGRISAAASVPGTTGSAGLRGRSQSSPTTTPARSTARPNGRPPGLRIPPGRHTLLVMR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEE
VADCDRPGLLAQLVSTDLFAHPERQARVELLRAATLARSGGRAKPQHAPPFPPDRRAMPV
ECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
RPSFPGGRPDVWNVPPRPAHFVGRTDLLDQVHQQLGDAGAVAVCALHGLGGIGKTALAIE
CCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHEEE
YAHRHPHSYDLIWWIAAEDPQLIPGHVSTLGRELGLPDGADWPAVLNVLRRERLRWLLIL
HHHCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCEEEEEE
DNIEDRNVISPFRPTDHLGRLLVTSRRTGLDAFGPQLAVPELPRRDAVDLLTRRVPAIDT
ECCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCHHHHHHHHHHCCCCCC
GTAGQIAELLGDLPLAVEQAAGYLTQTGMPSDDYVELLRGRLGEMLHRGWVADRPDITTA
CCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
NLWNLSLTQCREA
CCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA