| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is 158318047
Identifier: 158318047
GI number: 158318047
Start: 7661447
End: 7663165
Strand: Reverse
Name: 158318047
Synonym: Franean1_6307
Alternate gene names: NA
Gene position: 7663165-7661447 (Counterclockwise)
Preceding gene: 158318048
Following gene: 158318046
Centisome position: 85.32
GC content: 72.95
Gene sequence:
>1719_bases GTGACCCTCCCGATCCCCGCCGGCCCTGCCCCGGCCGGCCCCCTCGACCCCACGGCCCGTGACGATCGTGACGATCGGCC CGGTTCGCGGATGGCCCGGATGCGGATGCCGCTCGCTCGCCAGGTGGTCGAAGCGGTCGCCGTGGAGAACGGGGTGTGCG TGCGGCCGATGGCGATGCGGCGGACGAACCTCGACACGGGCGAGACCGAGATCATCCCCGTGCCGTGTGGGGCCACCCTC GCCAGCAAGTGCCCGACCTGCGCGGAGAAAGCCCGGCGGCTACGGATGGCGCAGTGCAAAGCCGGGTGGCACCTCGACGA CGAACCGCTTCCCGACCCGGACCCGCCGACGGACGACGCGAAGGTGCTTGCCGGGTTCCGCGCGGATTTGGAACTCGCCC GGCGGGACGCGGAACGGGACAGTGACCCGGCCGGCGTCGCGGAGATCGACGCGCTTATCGGCCAGGTGGACGAGGAACTC AACGCCCTGGGCGTGCGCGGCAAGGCGGCTCCGGACAACCGGGACCGGGCTCGCCGTGCCCGCTCGACCCGCCGGCGGCA GGACGCACCCGACCTCCCCCGGCTGCCGGTGGAGAAGCGCACGGTCGGCCGGACCTACGAAGCGGCGGACGGGACGACCT GGCGTCCGTCGATGTTCCTGACGCTGACCTGCGACACCTACGGCCGGGTGACCTCGGACGGCACCCCGGTGGATCCGGGG TCGTACGACTACCGGCGGGCGGCCCGCGACGCGATCCACTTCCCGAAGCTGATCGACCGGTTCTGGCAGAACCTCCGCCG TGCGGTGGGCTGGGATGTGCAGTACTTCGCGGCGCTGGAACCGCAACGGCGGCTCGCCCCGCACCTGCACGCGGCCATCC GCGGCACCGTCCCCCGGGCCCTCCTGCGCCAGGTGGCGGCGGCGACCTACCACCAGGTGTGGTGGCCACCCTGCGACCAA CCGGTCTATCCGGACACGGGACTCCCGACCTGGGCGGACGACGCGGGCGGCTACGTCGATCCGGGCTCCGGCCGGCCGCT GCCGATGTGGGATGAGGCGCTCGACGCGATCGGGGACGAGGACGAGGCGTCCCACGTGGTGCGCTTCGGCCCGCAACTGC AAGCGGACGGATTCACCGCGAGCTCGGCGCACACCGGCCGCATGATCGGCTACCTGTGCAAGTACCTGACCAAGAGCCTC GACGCCTGCCACACCACCACGACCGACGCGCAACGTCGCCACGTCGACCGGCTCGCCGAAGCCCTGCGCTACGAACCCTG CGCACCCACCTGCGCCAACTGGCTCCGCTACGGCGTCCAGCCGAAGAACCCGAAACCGGGCCTCGTCCCGGGCCGCTGCC GAGGGAAGGCACACCGGCGGGAAACTCTCGGCTTCGGCGGCCGGCGGGTCCTGGTGAGCCGCAAGTGGTCCGGCAAGACC CTGACCGACCACAAGCACGACCGGGTGGCGTTCATCCGGGCGCAGCTCGAAGCCCTCGGCCACACCGCCACCGGCCCGGC CGCGCACGACACCGACCCGGCGCGCACCGTCTGGACGCTGCTCCGGCCTGGCGACCCGGCCGCACCACGCCGTGAACACC TGCTGTTGCAGGCCGTCGCCCAACGCCACGCCTGGCGCGCACAGCTCGACACGGCCCGGCGCACCGCACCCGACGAACTT CCGGCAATCGGCCCACCGGGCGGGGCACAAGCCGCCTGA
Upstream 100 bases:
>100_bases CCACTGGCACCCCCACCCGGTGTGGCTGCACCCGGTTCACCGAACCCACCCCCACCAACCCCGACCGCCCGCACCTCGAC GTCACGGAGGACCAACCCGC
Downstream 100 bases:
>100_bases TCGTCCGCCCCGATCCCGTGGGAGAGAACCCGTGACCAAGCTTCTCCTGACACCGGCTGAGGCGGCCGAACTCCTCGGCG TCGGCCGGACAACGATCTAC
Product: replication initiator protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 572; Mature: 571
Protein sequence:
>572_residues MTLPIPAGPAPAGPLDPTARDDRDDRPGSRMARMRMPLARQVVEAVAVENGVCVRPMAMRRTNLDTGETEIIPVPCGATL ASKCPTCAEKARRLRMAQCKAGWHLDDEPLPDPDPPTDDAKVLAGFRADLELARRDAERDSDPAGVAEIDALIGQVDEEL NALGVRGKAAPDNRDRARRARSTRRRQDAPDLPRLPVEKRTVGRTYEAADGTTWRPSMFLTLTCDTYGRVTSDGTPVDPG SYDYRRAARDAIHFPKLIDRFWQNLRRAVGWDVQYFAALEPQRRLAPHLHAAIRGTVPRALLRQVAAATYHQVWWPPCDQ PVYPDTGLPTWADDAGGYVDPGSGRPLPMWDEALDAIGDEDEASHVVRFGPQLQADGFTASSAHTGRMIGYLCKYLTKSL DACHTTTTDAQRRHVDRLAEALRYEPCAPTCANWLRYGVQPKNPKPGLVPGRCRGKAHRRETLGFGGRRVLVSRKWSGKT LTDHKHDRVAFIRAQLEALGHTATGPAAHDTDPARTVWTLLRPGDPAAPRREHLLLQAVAQRHAWRAQLDTARRTAPDEL PAIGPPGGAQAA
Sequences:
>Translated_572_residues MTLPIPAGPAPAGPLDPTARDDRDDRPGSRMARMRMPLARQVVEAVAVENGVCVRPMAMRRTNLDTGETEIIPVPCGATL ASKCPTCAEKARRLRMAQCKAGWHLDDEPLPDPDPPTDDAKVLAGFRADLELARRDAERDSDPAGVAEIDALIGQVDEEL NALGVRGKAAPDNRDRARRARSTRRRQDAPDLPRLPVEKRTVGRTYEAADGTTWRPSMFLTLTCDTYGRVTSDGTPVDPG SYDYRRAARDAIHFPKLIDRFWQNLRRAVGWDVQYFAALEPQRRLAPHLHAAIRGTVPRALLRQVAAATYHQVWWPPCDQ PVYPDTGLPTWADDAGGYVDPGSGRPLPMWDEALDAIGDEDEASHVVRFGPQLQADGFTASSAHTGRMIGYLCKYLTKSL DACHTTTTDAQRRHVDRLAEALRYEPCAPTCANWLRYGVQPKNPKPGLVPGRCRGKAHRRETLGFGGRRVLVSRKWSGKT LTDHKHDRVAFIRAQLEALGHTATGPAAHDTDPARTVWTLLRPGDPAAPRREHLLLQAVAQRHAWRAQLDTARRTAPDEL PAIGPPGGAQAA >Mature_571_residues TLPIPAGPAPAGPLDPTARDDRDDRPGSRMARMRMPLARQVVEAVAVENGVCVRPMAMRRTNLDTGETEIIPVPCGATLA SKCPTCAEKARRLRMAQCKAGWHLDDEPLPDPDPPTDDAKVLAGFRADLELARRDAERDSDPAGVAEIDALIGQVDEELN ALGVRGKAAPDNRDRARRARSTRRRQDAPDLPRLPVEKRTVGRTYEAADGTTWRPSMFLTLTCDTYGRVTSDGTPVDPGS YDYRRAARDAIHFPKLIDRFWQNLRRAVGWDVQYFAALEPQRRLAPHLHAAIRGTVPRALLRQVAAATYHQVWWPPCDQP VYPDTGLPTWADDAGGYVDPGSGRPLPMWDEALDAIGDEDEASHVVRFGPQLQADGFTASSAHTGRMIGYLCKYLTKSLD ACHTTTTDAQRRHVDRLAEALRYEPCAPTCANWLRYGVQPKNPKPGLVPGRCRGKAHRRETLGFGGRRVLVSRKWSGKTL TDHKHDRVAFIRAQLEALGHTATGPAAHDTDPARTVWTLLRPGDPAAPRREHLLLQAVAQRHAWRAQLDTARRTAPDELP AIGPPGGAQAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62994; Mature: 62863
Theoretical pI: Translated: 8.77; Mature: 8.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLPIPAGPAPAGPLDPTARDDRDDRPGSRMARMRMPLARQVVEAVAVENGVCVRPMAMR CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCHHHH RTNLDTGETEIIPVPCGATLASKCPTCAEKARRLRMAQCKAGWHLDDEPLPDPDPPTDDA HCCCCCCCCEEEEECCCCHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHH KVLAGFRADLELARRDAERDSDPAGVAEIDALIGQVDEELNALGVRGKAAPDNRDRARRA HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH RSTRRRQDAPDLPRLPVEKRTVGRTYEAADGTTWRPSMFLTLTCDTYGRVTSDGTPVDPG HHHHHHCCCCCCCCCCCCHHHCCCCEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCC SYDYRRAARDAIHFPKLIDRFWQNLRRAVGWDVQYFAALEPQRRLAPHLHAAIRGTVPRA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHH LLRQVAAATYHQVWWPPCDQPVYPDTGLPTWADDAGGYVDPGSGRPLPMWDEALDAIGDE HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCC DEASHVVRFGPQLQADGFTASSAHTGRMIGYLCKYLTKSLDACHTTTTDAQRRHVDRLAE CHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH ALRYEPCAPTCANWLRYGVQPKNPKPGLVPGRCRGKAHRRETLGFGGRRVLVSRKWSGKT HHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEECCCCCC LTDHKHDRVAFIRAQLEALGHTATGPAAHDTDPARTVWTLLRPGDPAAPRREHLLLQAVA CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHH QRHAWRAQLDTARRTAPDELPAIGPPGGAQAA HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TLPIPAGPAPAGPLDPTARDDRDDRPGSRMARMRMPLARQVVEAVAVENGVCVRPMAMR CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCHHHH RTNLDTGETEIIPVPCGATLASKCPTCAEKARRLRMAQCKAGWHLDDEPLPDPDPPTDDA HCCCCCCCCEEEEECCCCHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHH KVLAGFRADLELARRDAERDSDPAGVAEIDALIGQVDEELNALGVRGKAAPDNRDRARRA HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH RSTRRRQDAPDLPRLPVEKRTVGRTYEAADGTTWRPSMFLTLTCDTYGRVTSDGTPVDPG HHHHHHCCCCCCCCCCCCHHHCCCCEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCC SYDYRRAARDAIHFPKLIDRFWQNLRRAVGWDVQYFAALEPQRRLAPHLHAAIRGTVPRA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHH LLRQVAAATYHQVWWPPCDQPVYPDTGLPTWADDAGGYVDPGSGRPLPMWDEALDAIGDE HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCC DEASHVVRFGPQLQADGFTASSAHTGRMIGYLCKYLTKSLDACHTTTTDAQRRHVDRLAE CHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH ALRYEPCAPTCANWLRYGVQPKNPKPGLVPGRCRGKAHRRETLGFGGRRVLVSRKWSGKT HHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEECCCCCC LTDHKHDRVAFIRAQLEALGHTATGPAAHDTDPARTVWTLLRPGDPAAPRREHLLLQAVA CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHH QRHAWRAQLDTARRTAPDELPAIGPPGGAQAA HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA