| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318046
Identifier: 158318046
GI number: 158318046
Start: 7661221
End: 7661415
Strand: Reverse
Name: 158318046
Synonym: Franean1_6306
Alternate gene names: NA
Gene position: 7661415-7661221 (Counterclockwise)
Preceding gene: 158318047
Following gene: 158318045
Centisome position: 85.3
GC content: 68.21
Gene sequence:
>195_bases GTGACCAAGCTTCTCCTGACACCGGCTGAGGCGGCCGAACTCCTCGGCGTCGGCCGGACAACGATCTACGAACTCATGAA CAGCGGAGACATCCCGTCCGTGCGGATCGGACGGGCGCGCCGCATCCCGTCGGTTGACCTGGTCGCCTTCGTCGACCGGC TGCGCGGCGTCGTCCGGGATGGGGAGGCCGCATGA
Upstream 100 bases:
>100_bases ACGGCCCGGCGCACCGCACCCGACGAACTTCCGGCAATCGGCCCACCGGGCGGGGCACAAGCCGCCTGATCGTCCGCCCC GATCCCGTGGGAGAGAACCC
Downstream 100 bases:
>100_bases CCAGGAGGTGCCGAGCACCACCCACCCGACCAAACCCGACCCGAACGCAAGGCGGTCCCGGCGAGTGCGTCAACACCCGA CCGGGACCTGAGACCTCACC
Product: DNA binding domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 64; Mature: 63
Protein sequence:
>64_residues MTKLLLTPAEAAELLGVGRTTIYELMNSGDIPSVRIGRARRIPSVDLVAFVDRLRGVVRDGEAA
Sequences:
>Translated_64_residues MTKLLLTPAEAAELLGVGRTTIYELMNSGDIPSVRIGRARRIPSVDLVAFVDRLRGVVRDGEAA >Mature_63_residues TKLLLTPAEAAELLGVGRTTIYELMNSGDIPSVRIGRARRIPSVDLVAFVDRLRGVVRDGEAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6908; Mature: 6777
Theoretical pI: Translated: 9.28; Mature: 9.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKLLLTPAEAAELLGVGRTTIYELMNSGDIPSVRIGRARRIPSVDLVAFVDRLRGVVRD CCCEECCHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC GEAA CCCC >Mature Secondary Structure TKLLLTPAEAAELLGVGRTTIYELMNSGDIPSVRIGRARRIPSVDLVAFVDRLRGVVRD CCEECCHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC GEAA CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA