Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is 158318037

Identifier: 158318037

GI number: 158318037

Start: 7648754

End: 7649422

Strand: Reverse

Name: 158318037

Synonym: Franean1_6297

Alternate gene names: NA

Gene position: 7649422-7648754 (Counterclockwise)

Preceding gene: 158318039

Following gene: 158318033

Centisome position: 85.16

GC content: 71.45

Gene sequence:

>669_bases
GTGGTGGACGGCATGATCGATCAGCACGACGCGGGGCACCCGTCGATCAGCACGCGCACCGCACCCACCGAGGCGGTGCA
CGTGCTGGCCGCGCGTGAGCTGGTCCACGATGCCGCCTACGGCAGCCTGGTCATGTGGGATGGATGGGTCGTGCACGGCC
TCCGCTTCGCGACCGTCGCTGCCCCCACTGCGGCCGGCCCTGCTTCCGCCGGTCCCACTGCGACCGGTCCCACTCCGGCC
GGAACCGAGGCGACGGGACCCGCCGACGCCGTTCCGACCGGCTCCGAGTCGCTGGATCTGTTCGGAGCCGGTGGCGCGCC
CGCCCGCATCGTGCTGCTGGCGCCGGCATCGGTGGGACGTGTCCTGGGGGATCAGGACCAGGCCTGCCGGTTCCAGATGT
GCGGACCGGTGCGTTCGGACGGCTGCGACTGGGTGTCCGTCGTCTTCGGCGGATGGGTCGCGCCGGTAGCCGAGCGATCC
GTCCCCGACCTGGTGTTGCACCTCGCCGATCGGCATCCGACCGGGGACCTGTTCGAACTCGGCGGCTCCTGGATGTTGCT
GGACATCGAGCTCGCCGAGGCCACGATCCGGACCCGCGCCGGATGCGTGCAACTGGACACCGACGACGCCGTCAACCTGC
TCACGGAGCCCTCGGGGGCCGGTCTCTGA

Upstream 100 bases:

>100_bases
GCTCAGCTTGGCCACGGGCTTGTGGCGCACGGGCCTCCTCCTTTAGGTTAGGTAACCTTAAATAAAGCGAACCTAACCAT
AGTGGACGCTGGAGGAGCAC

Downstream 100 bases:

>100_bases
CGACCCCGCTCGGCAGCGCCCACCCAGCCAGGGCGGCGCCCGGTGACAACCTCGTCAGCCGGCCGCCTGGATGTCGGTCT
GGATCTCGGCGAGGCGGATG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MVDGMIDQHDAGHPSISTRTAPTEAVHVLAARELVHDAAYGSLVMWDGWVVHGLRFATVAAPTAAGPASAGPTATGPTPA
GTEATGPADAVPTGSESLDLFGAGGAPARIVLLAPASVGRVLGDQDQACRFQMCGPVRSDGCDWVSVVFGGWVAPVAERS
VPDLVLHLADRHPTGDLFELGGSWMLLDIELAEATIRTRAGCVQLDTDDAVNLLTEPSGAGL

Sequences:

>Translated_222_residues
MVDGMIDQHDAGHPSISTRTAPTEAVHVLAARELVHDAAYGSLVMWDGWVVHGLRFATVAAPTAAGPASAGPTATGPTPA
GTEATGPADAVPTGSESLDLFGAGGAPARIVLLAPASVGRVLGDQDQACRFQMCGPVRSDGCDWVSVVFGGWVAPVAERS
VPDLVLHLADRHPTGDLFELGGSWMLLDIELAEATIRTRAGCVQLDTDDAVNLLTEPSGAGL
>Mature_222_residues
MVDGMIDQHDAGHPSISTRTAPTEAVHVLAARELVHDAAYGSLVMWDGWVVHGLRFATVAAPTAAGPASAGPTATGPTPA
GTEATGPADAVPTGSESLDLFGAGGAPARIVLLAPASVGRVLGDQDQACRFQMCGPVRSDGCDWVSVVFGGWVAPVAERS
VPDLVLHLADRHPTGDLFELGGSWMLLDIELAEATIRTRAGCVQLDTDDAVNLLTEPSGAGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22752; Mature: 22752

Theoretical pI: Translated: 4.28; Mature: 4.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDGMIDQHDAGHPSISTRTAPTEAVHVLAARELVHDAAYGSLVMWDGWVVHGLRFATVA
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCHHHHCEEEEEEE
APTAAGPASAGPTATGPTPAGTEATGPADAVPTGSESLDLFGAGGAPARIVLLAPASVGR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCHHHH
VLGDQDQACRFQMCGPVRSDGCDWVSVVFGGWVAPVAERSVPDLVLHLADRHPTGDLFEL
HHCCCCCCEEEEECCCCCCCCCCHHHHHHCCHHHHHHHCCHHHHHHHHHCCCCCCCHHHC
GGSWMLLDIELAEATIRTRAGCVQLDTDDAVNLLTEPSGAGL
CCCEEEEEEEEHHHHHHHCCCEEEECCCCHHHEEECCCCCCC
>Mature Secondary Structure
MVDGMIDQHDAGHPSISTRTAPTEAVHVLAARELVHDAAYGSLVMWDGWVVHGLRFATVA
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCHHHHCEEEEEEE
APTAAGPASAGPTATGPTPAGTEATGPADAVPTGSESLDLFGAGGAPARIVLLAPASVGR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCHHHH
VLGDQDQACRFQMCGPVRSDGCDWVSVVFGGWVAPVAERSVPDLVLHLADRHPTGDLFEL
HHCCCCCCEEEEECCCCCCCCCCHHHHHHCCHHHHHHHCCHHHHHHHHHCCCCCCCHHHC
GGSWMLLDIELAEATIRTRAGCVQLDTDDAVNLLTEPSGAGL
CCCEEEEEEEEHHHHHHHCCCEEEECCCCHHHEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA