Click here to switch to the map view.

The map label for this gene is 158318033

Identifier: 158318033

GI number: 158318033

Start: 7644204

End: 7645361

Strand: Reverse

Name: 158318033

Synonym: Franean1_6293

Alternate gene names: NA

Gene position: 7645361-7644204 (Counterclockwise)

Preceding gene: 158318037

Following gene: 158318032

Centisome position: 85.12

GC content: 68.48

Gene sequence:

>1158_bases
ATGGAACTCGAAAAGATCATCAACTTGGTGGAGCGGAAAGGCGTTGATCTCGCCACCGTCACCGCAGGCGAAGTTGACCT
GTCCACCGCCACGGGCCGGGCCGCTGCCCGCATCGTCGGCGCCATGGCCCGGCACGAGTCCGAGCAGAAGGCCGAGCGGC
TCCGCAGGCAGAAGCAGCAAGCCGCAGAGAAGGGCTTGGTGTCCGGCGGGGGGCACCGCGCGTTCGGCTACGAGCGGGAC
GGGCTGACGATCCGCGAGCCGGAGGCAGAGCTGATCCGTGAAGCCGCGGACCGTGTCCTCGCAGGCGAAACGATCGCCTC
CGTCTGCCGGGACTTCGAGGCACGCGACATCCGGACCACGGCCGGGAACTGGTGGAAGCCGCTCACCCTGCGGCAGATGC
TCTGCTCGGCCCGCATCTCCGGACGGCGGGAACACCGACCGGGAAAGTCGTCGACCGCCATCATCGGCGAGATCGTGGCC
GACGCGGTTTGGCCAGGCATCATCAGCACCGAGGACTCTGACGAGCTCCGCGCCCAGCTGGGTCGAACGGGAACTGGGCG
GATCACGGGGGCTACCGGCCGCGTCTACCTGCTGTCCGGGATCCTTCGCTGCGGCATCTGCACCGGCCGGATCTCCGGAC
ACAACACCGGCAGAGGGCGCCGCTACTACTGCCCCGGAGCGCCGGGCTCCACCTCCTGCGGCCGGCTGACCATGGGCATG
GACCGCACCGACATCCACATCCGTGACACCGTGCTCCTGGCCCTTGACAGCCCGGACTTCCGCGAACGGCTGCACCGGCG
GGCCAAGGTAGACCCGGCCATCCGGACATCGGTGAAGAACGACGAACGGCTGCTGAGCGAGCTCGACGAGGACCGCACCG
CAGGAAGGATCAGCCGCGCCCGCTGGCTTCAGATGTCGGACACGGTCAACGCCCGGCTGGAAACGAACCGGCGGAAGCTC
GCCGCAGTGCCCTCACTGAGAGCCCTGGAAGGGCTGGACGGCAGCTACGAGGAGATGCTGCCAGTGTGGGAGGCGCGGAA
CATTTCGCAGCGCAGGGCGATCGTCACCGCCTGCGTGTCCCACATCATCGTGAACCGAGCGGCCCGCCGCGGCCCCGTGT
TCGACCCCGACCGGTTCGACCCGCAATGGCTGGTGTAG

Upstream 100 bases:

>100_bases
CAAGCCGCGGCCCGCCTGGGAACGGCTCATCGGCGACATCGAAGCCGGTCACGTCGACGTTGTGGTCTGCTGGCACCCTG
ACCGGCTCACCCGGCAGCCC

Downstream 100 bases:

>100_bases
CCGCGGCGCCGAACCATCGAGGCCTCGGAGCCGACCACGCCCCAGCGGCGAGTAGCGCGGCCAGCTGCCTCTCCGGGGCG
GGGTCTACCGCTCCGTCCAC

Product: recombinase

Products: NA

Alternate protein names: Resolvase Domain Protein; Integrase/Recombinase; Resolvase Domain-Containing Protein; Site-Specific Recombinase DNA Invertase Pin; Integrase; Transposase; Ntegrase/Recombinase.; Site-Specific Recombinase; Site-Specific Integrase; PhiRv1 Phage Integrase

Number of amino acids: Translated: 385; Mature: 385

Protein sequence:

>385_residues
MELEKIINLVERKGVDLATVTAGEVDLSTATGRAAARIVGAMARHESEQKAERLRRQKQQAAEKGLVSGGGHRAFGYERD
GLTIREPEAELIREAADRVLAGETIASVCRDFEARDIRTTAGNWWKPLTLRQMLCSARISGRREHRPGKSSTAIIGEIVA
DAVWPGIISTEDSDELRAQLGRTGTGRITGATGRVYLLSGILRCGICTGRISGHNTGRGRRYYCPGAPGSTSCGRLTMGM
DRTDIHIRDTVLLALDSPDFRERLHRRAKVDPAIRTSVKNDERLLSELDEDRTAGRISRARWLQMSDTVNARLETNRRKL
AAVPSLRALEGLDGSYEEMLPVWEARNISQRRAIVTACVSHIIVNRAARRGPVFDPDRFDPQWLV

Sequences:

>Translated_385_residues
MELEKIINLVERKGVDLATVTAGEVDLSTATGRAAARIVGAMARHESEQKAERLRRQKQQAAEKGLVSGGGHRAFGYERD
GLTIREPEAELIREAADRVLAGETIASVCRDFEARDIRTTAGNWWKPLTLRQMLCSARISGRREHRPGKSSTAIIGEIVA
DAVWPGIISTEDSDELRAQLGRTGTGRITGATGRVYLLSGILRCGICTGRISGHNTGRGRRYYCPGAPGSTSCGRLTMGM
DRTDIHIRDTVLLALDSPDFRERLHRRAKVDPAIRTSVKNDERLLSELDEDRTAGRISRARWLQMSDTVNARLETNRRKL
AAVPSLRALEGLDGSYEEMLPVWEARNISQRRAIVTACVSHIIVNRAARRGPVFDPDRFDPQWLV
>Mature_385_residues
MELEKIINLVERKGVDLATVTAGEVDLSTATGRAAARIVGAMARHESEQKAERLRRQKQQAAEKGLVSGGGHRAFGYERD
GLTIREPEAELIREAADRVLAGETIASVCRDFEARDIRTTAGNWWKPLTLRQMLCSARISGRREHRPGKSSTAIIGEIVA
DAVWPGIISTEDSDELRAQLGRTGTGRITGATGRVYLLSGILRCGICTGRISGHNTGRGRRYYCPGAPGSTSCGRLTMGM
DRTDIHIRDTVLLALDSPDFRERLHRRAKVDPAIRTSVKNDERLLSELDEDRTAGRISRARWLQMSDTVNARLETNRRKL
AAVPSLRALEGLDGSYEEMLPVWEARNISQRRAIVTACVSHIIVNRAARRGPVFDPDRFDPQWLV

Specific function: Unknown

COG id: COG1961

COG function: function code L; Site-specific recombinases, DNA invertase Pin homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42654; Mature: 42654

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELEKIINLVERKGVDLATVTAGEVDLSTATGRAAARIVGAMARHESEQKAERLRRQKQQ
CCHHHHHHHHHHCCCCEEEEECCCEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHH
AAEKGLVSGGGHRAFGYERDGLTIREPEAELIREAADRVLAGETIASVCRDFEARDIRTT
HHHCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEC
AGNWWKPLTLRQMLCSARISGRREHRPGKSSTAIIGEIVADAVWPGIISTEDSDELRAQL
CCCCCCHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
GRTGTGRITGATGRVYLLSGILRCGICTGRISGHNTGRGRRYYCPGAPGSTSCGRLTMGM
CCCCCCEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEECC
DRTDIHIRDTVLLALDSPDFRERLHRRAKVDPAIRTSVKNDERLLSELDEDRTAGRISRA
CCCCEEEEEEEEEEECCCHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
RWLQMSDTVNARLETNRRKLAAVPSLRALEGLDGSYEEMLPVWEARNISQRRAIVTACVS
HHHHHCCCHHHHHHCCCHHHHHCCCHHHHHCCCCCHHHHCCHHHHCCHHHHHHHHHHHHH
HIIVNRAARRGPVFDPDRFDPQWLV
HHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MELEKIINLVERKGVDLATVTAGEVDLSTATGRAAARIVGAMARHESEQKAERLRRQKQQ
CCHHHHHHHHHHCCCCEEEEECCCEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHH
AAEKGLVSGGGHRAFGYERDGLTIREPEAELIREAADRVLAGETIASVCRDFEARDIRTT
HHHCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEC
AGNWWKPLTLRQMLCSARISGRREHRPGKSSTAIIGEIVADAVWPGIISTEDSDELRAQL
CCCCCCHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
GRTGTGRITGATGRVYLLSGILRCGICTGRISGHNTGRGRRYYCPGAPGSTSCGRLTMGM
CCCCCCEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEECC
DRTDIHIRDTVLLALDSPDFRERLHRRAKVDPAIRTSVKNDERLLSELDEDRTAGRISRA
CCCCEEEEEEEEEEECCCHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
RWLQMSDTVNARLETNRRKLAAVPSLRALEGLDGSYEEMLPVWEARNISQRRAIVTACVS
HHHHHCCCHHHHHHCCCHHHHHCCCHHHHHCCCCCHHHHCCHHHHCCHHHHHHHHHHHHH
HIIVNRAARRGPVFDPDRFDPQWLV
HHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA