| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318024
Identifier: 158318024
GI number: 158318024
Start: 7631856
End: 7633001
Strand: Direct
Name: 158318024
Synonym: Franean1_6284
Alternate gene names: NA
Gene position: 7631856-7633001 (Clockwise)
Preceding gene: 158318021
Following gene: 158318027
Centisome position: 84.97
GC content: 70.51
Gene sequence:
>1146_bases ATGGCGGACAACGGGGGAGCACGCCGAGTCGGTCGGCGGTGGCTGTGGATCTGCGCTGGGATCGCCGCGGCCGGCGCCGT GGCCGCAGTCGTGGGAATCTGGCACCTGCCCGACCGGATGTACCAGGGCGAGGAGGCACGGGCGGCGCTGCAGGGCGGCC TGCTGACGGCGGCCGCCGCGCTGACCGCGGTGGCCGGTGGTCTGATCGCGTTGGACGAGACCCGGCAGGCTAACGCGGAG ACCCGGCGGGCGAACCGGGATACCCACGTGCGGGAGTTGTACGTGGAGGCGGCGAAGCTACTCAACGACCCGGACAACCT CGGGGTCCGCCTGGCCGGGATATACGCCCTGGAACGGATCGCGGTGGATTCCTCGGTGGATCAGCGCACGGTCGTGGAGG TGCTCTCCGCGTTCGTGCGAACCCGCAGCACCGACTCCGCGCTACGCCCACCATCACCCGCCGATAGTCAGGAATCACCA CTGGTGCGGCCGGCAGCGGACATCCGTGCCGCCGTCCAGGTCCTGGGTCGCCTCCCGGCCCTCGATGGTGTCCCACGCTG CGACCTGGACGGCGCGGACCTCACCGGTCCCGCCGGGCTCGGGGGCCTCGATCTTTCTGAGGCCAACCTTCTGGGCGCCC AGCTGGCTGGGGCGGAACTTACCTACGCCGTGCTGCACGGAGCGAATCTCACTGGCGCCCGGCTGGACGGTGCGGACCTC ACCTCCGCCGTGTTGATAGGAGCGCACCTCGCTGGCGTCAAGATGGACGGGGCGAACCTTAGCGATGTCCGGCTGGTGGG TGCGGACCTGACCTTCGCTCAGCTGGGCGGAGCAAACCTCACCAACGCCTTCCTCGCCATGGCCACCATGACCTATGCCG TGTTGGAGGGAGCGCACCTCGGCGGCGCCCTGCTGGCCGGAACGAATCTCACCGGCGCCCGGCTAGTTGGTGCAGATCTC ACCGGCGCCCAGCTGGTGAATGCGGATCTCACCGCTGCCCAGATGGAGGGGACGGATCTCACCGGCGCCCGGGGCCTGGC GGCGGAGCAGGTGGCAGCGGCGTCCGGGGATGCGCGGACGCGGTTGCCGGACGGAGTGGAACGGCCTGCGTCCTGGCCGC CGTACGAGCCGCCTCCGGAGCAGTAA
Upstream 100 bases:
>100_bases TCCTGCTCGCACTCCCGCCGCCATCCCTTGACCTTCGGCGCTTCCGGCTGCGCCAAGACCCCGCCGAGCGCGACCAGCGC GGTGGCGTACAACCTCCCCC
Downstream 100 bases:
>100_bases GGCGGTCTCCGGAGGCCCGCGGCTTCCCGCCGCAGACGATCAGCGAGTAGAGGCCCGACCCAGAGATGATCATTACGCTC TGCGGACCGCCAAGCCAGGC
Product: pentapeptide repeat-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 381; Mature: 380
Protein sequence:
>381_residues MADNGGARRVGRRWLWICAGIAAAGAVAAVVGIWHLPDRMYQGEEARAALQGGLLTAAAALTAVAGGLIALDETRQANAE TRRANRDTHVRELYVEAAKLLNDPDNLGVRLAGIYALERIAVDSSVDQRTVVEVLSAFVRTRSTDSALRPPSPADSQESP LVRPAADIRAAVQVLGRLPALDGVPRCDLDGADLTGPAGLGGLDLSEANLLGAQLAGAELTYAVLHGANLTGARLDGADL TSAVLIGAHLAGVKMDGANLSDVRLVGADLTFAQLGGANLTNAFLAMATMTYAVLEGAHLGGALLAGTNLTGARLVGADL TGAQLVNADLTAAQMEGTDLTGARGLAAEQVAAASGDARTRLPDGVERPASWPPYEPPPEQ
Sequences:
>Translated_381_residues MADNGGARRVGRRWLWICAGIAAAGAVAAVVGIWHLPDRMYQGEEARAALQGGLLTAAAALTAVAGGLIALDETRQANAE TRRANRDTHVRELYVEAAKLLNDPDNLGVRLAGIYALERIAVDSSVDQRTVVEVLSAFVRTRSTDSALRPPSPADSQESP LVRPAADIRAAVQVLGRLPALDGVPRCDLDGADLTGPAGLGGLDLSEANLLGAQLAGAELTYAVLHGANLTGARLDGADL TSAVLIGAHLAGVKMDGANLSDVRLVGADLTFAQLGGANLTNAFLAMATMTYAVLEGAHLGGALLAGTNLTGARLVGADL TGAQLVNADLTAAQMEGTDLTGARGLAAEQVAAASGDARTRLPDGVERPASWPPYEPPPEQ >Mature_380_residues ADNGGARRVGRRWLWICAGIAAAGAVAAVVGIWHLPDRMYQGEEARAALQGGLLTAAAALTAVAGGLIALDETRQANAET RRANRDTHVRELYVEAAKLLNDPDNLGVRLAGIYALERIAVDSSVDQRTVVEVLSAFVRTRSTDSALRPPSPADSQESPL VRPAADIRAAVQVLGRLPALDGVPRCDLDGADLTGPAGLGGLDLSEANLLGAQLAGAELTYAVLHGANLTGARLDGADLT SAVLIGAHLAGVKMDGANLSDVRLVGADLTFAQLGGANLTNAFLAMATMTYAVLEGAHLGGALLAGTNLTGARLVGADLT GAQLVNADLTAAQMEGTDLTGARGLAAEQVAAASGDARTRLPDGVERPASWPPYEPPPEQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 5 pentapeptide repeat domains [H]
Homologues:
Organism=Drosophila melanogaster, GI221377802, Length=191, Percent_Identity=34.5549738219895, Blast_Score=69, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001646 [H]
Pfam domain/function: PF00805 Pentapeptide [H]
EC number: NA
Molecular weight: Translated: 39016; Mature: 38884
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADNGGARRVGRRWLWICAGIAAAGAVAAVVGIWHLPDRMYQGEEARAALQGGLLTAAAA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHCCHHHHHHH LTAVAGGLIALDETRQANAETRRANRDTHVRELYVEAAKLLNDPDNLGVRLAGIYALERI HHHHHCCEEEECCCHHCCHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHH AVDSSVDQRTVVEVLSAFVRTRSTDSALRPPSPADSQESPLVRPAADIRAAVQVLGRLPA HHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC LDGVPRCDLDGADLTGPAGLGGLDLSEANLLGAQLAGAELTYAVLHGANLTGARLDGADL CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHH TSAVLIGAHLAGVKMDGANLSDVRLVGADLTFAQLGGANLTNAFLAMATMTYAVLEGAHL HHHHHHHHHHHCEEECCCCCCCEEEEECCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCC GGALLAGTNLTGARLVGADLTGAQLVNADLTAAQMEGTDLTGARGLAAEQVAAASGDART CCEEEECCCCCCCEEECCCCCCCEEECCCCHHHHCCCCCCCCCCCCHHHHHHHCCCCCCC RLPDGVERPASWPPYEPPPEQ CCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure ADNGGARRVGRRWLWICAGIAAAGAVAAVVGIWHLPDRMYQGEEARAALQGGLLTAAAA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHCCHHHHHHH LTAVAGGLIALDETRQANAETRRANRDTHVRELYVEAAKLLNDPDNLGVRLAGIYALERI HHHHHCCEEEECCCHHCCHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHH AVDSSVDQRTVVEVLSAFVRTRSTDSALRPPSPADSQESPLVRPAADIRAAVQVLGRLPA HHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC LDGVPRCDLDGADLTGPAGLGGLDLSEANLLGAQLAGAELTYAVLHGANLTGARLDGADL CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHH TSAVLIGAHLAGVKMDGANLSDVRLVGADLTFAQLGGANLTNAFLAMATMTYAVLEGAHL HHHHHHHHHHHCEEECCCCCCCEEEEECCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCC GGALLAGTNLTGARLVGADLTGAQLVNADLTAAQMEGTDLTGARGLAAEQVAAASGDART CCEEEECCCCCCCEEECCCCCCCEEECCCCHHHHCCCCCCCCCCCCHHHHHHHCCCCCCC RLPDGVERPASWPPYEPPPEQ CCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA