| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318017
Identifier: 158318017
GI number: 158318017
Start: 7624747
End: 7625532
Strand: Direct
Name: 158318017
Synonym: Franean1_6277
Alternate gene names: NA
Gene position: 7624747-7625532 (Clockwise)
Preceding gene: 158318016
Following gene: 158318018
Centisome position: 84.89
GC content: 74.05
Gene sequence:
>786_bases TTGCTCGACGACTTCGAGGCGGCCACAGCTGGCCGCACCTTGCCGGCAGGCTACGTCCTGGACGCCGGCGTCCTCGGTGT AGATCTGGCCGCCGCACGCGCCAGGGTCGCCGCCTACGCTCAGACGCGGGAGTTGCTGCGAGCCCGCCTGGTGCTCGCTC TTAGCCCGGCCGAATTCCGCCGGCTGGACGTCCACCTGCGCCGGCTGCCGGTCCGTGGCGCGGTCGCGCTGATGGTCACC GTTGCCGGCACCGACGCAGCCGGCTTGGAGAGGCTTCGCGCCCAGCTGGCCCCGGCCCCGCCCGGCCGGTGGGGCGCCGC GGTCCACCTCGTCGATGCCGCCCGGCGGGCCGCACAGCCGCGGGACCACGTCGCCGTACCCGCCCACCTCTCCAGGCCCG TCAGGGTGCTGCTGGCGTTCGGCGCCGAGGCCCACAGCCGGGCCAGTGGGGGATCGGCCGTTCTTCCCGGCCTGCCCGCG CTCCTCGAAGAGCTGCGCACGGCCGGAGTTCGCCATGACCGCGGCCTGGCCGTCCCCCCGCCTCGGTTCCAAGTGGAAAC CGCCCCGTCAGGGCCCTCCATGATCGGAAGAGAGCCCACCGAGGGCACTCCGACCGAGTGGGTGTCCGCCTCCGACTACG CGCGGCGGGCCCGGATCACCCGGCAGGCGGCGACACGTCAGGCCAGGGAGGGCCGAGCACCGGCGCGGATGGTCGGAGGC CGGTGGTTGATCTTGACTGACTTGGAGCCTGATGCCCCCGCCCCCGATCCCGACCAGCACCGATGA
Upstream 100 bases:
>100_bases GGGCACTCGTCCTCGCGGAACAGGCGGGCCCACCGGTCACCGTCATCGTCGGCCGTCACCGCCGCACCTACCACGGGATT TGATCAGGAGTGAAACCGCG
Downstream 100 bases:
>100_bases CCTGGACGGCGCCCTCACCGCGCTCGACTCCGCTGCCAGCCCGGAGCAGGCCGCCGACGCCGAAGGGCTGATCGCACGCA TCCTGGCTCGCCGCGCCGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 261; Mature: 261
Protein sequence:
>261_residues MLDDFEAATAGRTLPAGYVLDAGVLGVDLAAARARVAAYAQTRELLRARLVLALSPAEFRRLDVHLRRLPVRGAVALMVT VAGTDAAGLERLRAQLAPAPPGRWGAAVHLVDAARRAAQPRDHVAVPAHLSRPVRVLLAFGAEAHSRASGGSAVLPGLPA LLEELRTAGVRHDRGLAVPPPRFQVETAPSGPSMIGREPTEGTPTEWVSASDYARRARITRQAATRQAREGRAPARMVGG RWLILTDLEPDAPAPDPDQHR
Sequences:
>Translated_261_residues MLDDFEAATAGRTLPAGYVLDAGVLGVDLAAARARVAAYAQTRELLRARLVLALSPAEFRRLDVHLRRLPVRGAVALMVT VAGTDAAGLERLRAQLAPAPPGRWGAAVHLVDAARRAAQPRDHVAVPAHLSRPVRVLLAFGAEAHSRASGGSAVLPGLPA LLEELRTAGVRHDRGLAVPPPRFQVETAPSGPSMIGREPTEGTPTEWVSASDYARRARITRQAATRQAREGRAPARMVGG RWLILTDLEPDAPAPDPDQHR >Mature_261_residues MLDDFEAATAGRTLPAGYVLDAGVLGVDLAAARARVAAYAQTRELLRARLVLALSPAEFRRLDVHLRRLPVRGAVALMVT VAGTDAAGLERLRAQLAPAPPGRWGAAVHLVDAARRAAQPRDHVAVPAHLSRPVRVLLAFGAEAHSRASGGSAVLPGLPA LLEELRTAGVRHDRGLAVPPPRFQVETAPSGPSMIGREPTEGTPTEWVSASDYARRARITRQAATRQAREGRAPARMVGG RWLILTDLEPDAPAPDPDQHR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27792; Mature: 27792
Theoretical pI: Translated: 11.62; Mature: 11.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDDFEAATAGRTLPAGYVLDAGVLGVDLAAARARVAAYAQTRELLRARLVLALSPAEFR CCCCCCHHHCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECHHHHH RLDVHLRRLPVRGAVALMVTVAGTDAAGLERLRAQLAPAPPGRWGAAVHLVDAARRAAQP HHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCC RDHVAVPAHLSRPVRVLLAFGAEAHSRASGGSAVLPGLPALLEELRTAGVRHDRGLAVPP CCCEECCHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC PRFQVETAPSGPSMIGREPTEGTPTEWVSASDYARRARITRQAATRQAREGRAPARMVGG CCEEEEECCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCC RWLILTDLEPDAPAPDPDQHR EEEEEEECCCCCCCCCCCCCC >Mature Secondary Structure MLDDFEAATAGRTLPAGYVLDAGVLGVDLAAARARVAAYAQTRELLRARLVLALSPAEFR CCCCCCHHHCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECHHHHH RLDVHLRRLPVRGAVALMVTVAGTDAAGLERLRAQLAPAPPGRWGAAVHLVDAARRAAQP HHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCC RDHVAVPAHLSRPVRVLLAFGAEAHSRASGGSAVLPGLPALLEELRTAGVRHDRGLAVPP CCCEECCHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC PRFQVETAPSGPSMIGREPTEGTPTEWVSASDYARRARITRQAATRQAREGRAPARMVGG CCEEEEECCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCC RWLILTDLEPDAPAPDPDQHR EEEEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA