| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318014
Identifier: 158318014
GI number: 158318014
Start: 7621294
End: 7621665
Strand: Direct
Name: 158318014
Synonym: Franean1_6274
Alternate gene names: NA
Gene position: 7621294-7621665 (Clockwise)
Preceding gene: 158318013
Following gene: 158318015
Centisome position: 84.85
GC content: 64.78
Gene sequence:
>372_bases ATGATCCCGGCCCAAGGCTGGATGGCCGAGTTCCACAACCGCACAAACGCAAGAGTGATCGCCTGGAACAACGACGGCCA GGCGCTCGTCGTCGACAAAGCCGCAGGTCGACTGGTGCCCGCCGCCCAGTTCGAAGGCTTCGAGGGCCTCGAAGTCGACG ACCACATCGTTGCCGCACTGCCCGGCGATGGATGGATGGGCGAGTTCCGTAGCGGCGGCTCCACCTTCCATGAGCCGGTC ATCGGCTGGCGCGTCCTTCACCTCGGCATCGGCGACCCGTTCTTCGGCGACGATCAGGGCTACTTCGAGCACGCTCCCAC CCCTGAGCTAGTCCTGTCTTCCGCACGTGCGTGCGGTGAGACAGCTGCTTGA
Upstream 100 bases:
>100_bases GCGGCCGGGCATCGTCCGGGGCTGACCTTCCGCCGGCCCCGGACGCATTCCGGGGCCGGCCCGCGCGCCCCACACCCGTC ATCACCCGATAGGGGACAAC
Downstream 100 bases:
>100_bases TGTCTTGTTCGGATCACGTCGGGATGGTCGCGATCGGTAGTGACGGGCCTGGGACTGTTCCTGGCTGTGTCGGTCGCGAT GGACTACGGGCCGCCGAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 123; Mature: 123
Protein sequence:
>123_residues MIPAQGWMAEFHNRTNARVIAWNNDGQALVVDKAAGRLVPAAQFEGFEGLEVDDHIVAALPGDGWMGEFRSGGSTFHEPV IGWRVLHLGIGDPFFGDDQGYFEHAPTPELVLSSARACGETAA
Sequences:
>Translated_123_residues MIPAQGWMAEFHNRTNARVIAWNNDGQALVVDKAAGRLVPAAQFEGFEGLEVDDHIVAALPGDGWMGEFRSGGSTFHEPV IGWRVLHLGIGDPFFGDDQGYFEHAPTPELVLSSARACGETAA >Mature_123_residues MIPAQGWMAEFHNRTNARVIAWNNDGQALVVDKAAGRLVPAAQFEGFEGLEVDDHIVAALPGDGWMGEFRSGGSTFHEPV IGWRVLHLGIGDPFFGDDQGYFEHAPTPELVLSSARACGETAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13249; Mature: 13249
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPAQGWMAEFHNRTNARVIAWNNDGQALVVDKAAGRLVPAAQFEGFEGLEVDDHIVAAL CCCCCCHHHHHCCCCCCEEEEECCCCCEEEEECCCCCEECCHHCCCCCCCCCCCEEEEEE PGDGWMGEFRSGGSTFHEPVIGWRVLHLGIGDPFFGDDQGYFEHAPTPELVLSSARACGE CCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCC TAA CCC >Mature Secondary Structure MIPAQGWMAEFHNRTNARVIAWNNDGQALVVDKAAGRLVPAAQFEGFEGLEVDDHIVAAL CCCCCCHHHHHCCCCCCEEEEECCCCCEEEEECCCCCEECCHHCCCCCCCCCCCEEEEEE PGDGWMGEFRSGGSTFHEPVIGWRVLHLGIGDPFFGDDQGYFEHAPTPELVLSSARACGE CCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCC TAA CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA