Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158318012

Identifier: 158318012

GI number: 158318012

Start: 7617980

End: 7620157

Strand: Direct

Name: 158318012

Synonym: Franean1_6272

Alternate gene names: NA

Gene position: 7617980-7620157 (Clockwise)

Preceding gene: 158318011

Following gene: 158318013

Centisome position: 84.81

GC content: 69.15

Gene sequence:

>2178_bases
GTGACTACGCCGCCGCTGGAGCGGTTCTCCAACGCCTACACAGCCGCCACCGGATGGGGTATCGACCCCACCCGCGCTCA
GCAGGACGTCCGCTGCCCTGCTCATGAGGACGGGTCGCCGTCGCTGTCGGTCGGTGCCGGCCACGACGGGCGGGTGCTGC
TGACCTGCCAGGCCGGGTGCGATCTGGACGCGATCCTGGCCGCCGTCGAGCTGGCCACCGCCGACCTGTTCCCGCCCCGC
GGCGAGCAGGCGAAGCCGCAGATCGTCGCGTCGTATCCGTACACCGACGAGCAGGGAACCCGACTGTTCACGGTCCACCG
CAAGGAGCCGGGCCGGGACGGGAGCCGGAAGGAGTTCGTCCAGCAGGCCGCGGACGGGTCCTGGAAGACCCGGGGTATCC
GCAAGCCGCTGTACCGGCTGCCCGAGGTTGTCGAGGCCGTGAAGAACGGTGCCGTCGTCTGGGTTGTCGAGGGCGAGAAG
GATGCTGACCGGCTCGCCAGCCTCAGCCTGACGGCCACGACCTGCCCGCAGGGCGCGAGGAAGTGGAAAGCGGAGCACAC
CGACAGCCTGTCCGGCGCCGCCGACGTGCGGGTCATCGCGGACAACGACGATCCGGGCCGGGCGCACGCCGCCCAGGTAG
AGGCCGTTCTGCGGCCGGTCGTGACCTCGGTGTCGGTGTGGCTGCCAGCCGCAGGTAAGGACGTCTCCGACCATCTGAAC
GCCGGTCACGGCCTGGACGATCTGCGTCCGCTCGCCGTCGACGAAGGGCCGGCGCCCGGTGCTGCGTCGACGGCTGCAGC
CTCGACCGTTGACGCGGCAGAGCTTGAGACCGACGACGCGAACGCGCTGCGCCTGGTAGCGGAGTACGGGAACACGATCC
GCCGCGTGTCGGACATGGGGTCGTGGTGGCGCTGGACTGGAAAGCGATGGGAGCGGGATCACGACGACGCCCACGTACGC
GAAGCCGCGAAGATCCTCGCCCGGAAGCTCCCGGCGGAAACACTTGAGCAGCGGAAGTACAAGCGCGCGAGCCTGAGCAG
CACGGGCCTGTCGGGAGCTACGCGGGTCGCCCAGTCCGACCCGCGGGTCACCGTGCTCGCCCGCGATCTCGACGCCCACC
CGCACCTGCTGAACACACAGTCCGGTGTGGTCGACCTCGTGACCGGAGCTGTAAAGCCGCACGACCCATGGCTGATGCTG
ACCCGGATAACCCCCCTCGACGTCGACACCGAGGCCACACACCCGATGTGGTCCGAGTTCCTCGCCGAGACCTTCGGCGG
GGACACCGAGCTGGTCGCCTACGTACAGAGCCTGTGCGGACTCGCTCTGCTGGGCGACGTCCGGGAGCACGTCCTGCCCC
TCATGTACGGGGCTGGGGCCAATGGGAAAGGCGTGATCCTGCTGGTCCTGCAGGGTCTCCTGGGCATCGCCGACACCGGC
GGCTACTCAGTCTCCGCCCCGGACGGCTTCCTGATGGCCGGGAACGGCACCGCACACCCAACCGAGATCGCCCGGCTCCG
CGGCGCACGCCTCGTGGTGTGTTCGGAGCAGACCTCCGGCCGACGCTTCGACGAAGCCAAGGTCAAGAGGCTCACCGGCG
GAGACCTCCTCACCGGGCGGTTCATGCGCGGCGACTTCTTCGATTTTGAGCCGTCTCACCTGACCGTCGTCGCCACGAAT
CATCTGCCCGAAGTCATCGAAGGCGGACCCTCGTTCTGGCGCCGGGCCCGGCTGATCCCGTTCGATCACGTGGTTCCGCC
CGAGCGGCGTGACACGGAGCTACACACCAAGCTCCTGAGCGCCGAAGGGCCGGCGATCTTGGGCTGGATGGTCCGCGGGG
CGATGATCGTCATCGGAAGCGGGCTGGTCGACCCGCCCCGCGTGCTCGCCGCCACCGACGACTACCGCATCAGCGAGGAC
AGCCTCGCGTCGTTCGTCCGCGACGACTGCATCGTCAACCCGCACGCCTGGTGCACGGTCCCGGACTTCCGCACGCGCTA
TGAGGCGCACTGCGCGGAGATGGGTGTGGACCCGTTGTCCGCGAAGGCGGTCACCACTCGGCTGACCAGGGAGTTTCCGG
TGCAGTCCGACCGTCTCTCCCGCCCTTCCCGTCGGATCTACCGCGGGATCGGGCTGGTCGATGCGGACGCAGAGTCCGAC
GAAGAAACCGGCCGGTGA

Upstream 100 bases:

>100_bases
CGTGCCCCCACGGCAGCAACTCCTCTTCCAGAATAGCATCAGCTGCCGACGGAATCGCCCGGCTCCGCGTGCGTCTCTGC
GTGCTGGCGGCTGGTGCTCG

Downstream 100 bases:

>100_bases
CGACGCGGCGATGACGGATGACGGATCGGGCCCCGAGGCCACATTTCCAGCGTTCGCGCGGGCGCCTGCGCGCACGCATA
TGCGCTACGCGGCAAATGCG

Product: P4 family phage/plasmid primase

Products: NA

Alternate protein names: Phage/Plasmid Primase P4 Family; DNA Primase/Helicase; Phage DNA Polymerase; Phage Primase; Primase; Phage-Like Protein; AAA ATPase; Nucleoside Triphosphatase D5 Family; DNA Primase Domain-Containing Protein; Phage-Associated Protein; Phage/Plasmid Primase; Phage/Plasmid DNA Primase; Phage/Plasmid Primase P4-Like; Bacteriophage-Related Protein; Phage/Plasmid Primase P4 C-Terminal Protein; Transcriptional Regulator; DNA-Polymerase Or DNA-Primase; Bacteriophage Related Protein; Prophage; Regulatory Protein; Plasmid/Phage Primase; Prim; Bacteriophage Protein; Primase P4-Like Protein; D5 N-Terminal Domain Family Protein; Phage Associated DNA Primase; Zinc Finger CHC2-Family Protein; DNA Primase Phage/Plasmid; Phage/Plasmid Primase P4-Like Protein; DNA Primase; Telomere-Associated Protein

Number of amino acids: Translated: 725; Mature: 724

Protein sequence:

>725_residues
MTTPPLERFSNAYTAATGWGIDPTRAQQDVRCPAHEDGSPSLSVGAGHDGRVLLTCQAGCDLDAILAAVELATADLFPPR
GEQAKPQIVASYPYTDEQGTRLFTVHRKEPGRDGSRKEFVQQAADGSWKTRGIRKPLYRLPEVVEAVKNGAVVWVVEGEK
DADRLASLSLTATTCPQGARKWKAEHTDSLSGAADVRVIADNDDPGRAHAAQVEAVLRPVVTSVSVWLPAAGKDVSDHLN
AGHGLDDLRPLAVDEGPAPGAASTAAASTVDAAELETDDANALRLVAEYGNTIRRVSDMGSWWRWTGKRWERDHDDAHVR
EAAKILARKLPAETLEQRKYKRASLSSTGLSGATRVAQSDPRVTVLARDLDAHPHLLNTQSGVVDLVTGAVKPHDPWLML
TRITPLDVDTEATHPMWSEFLAETFGGDTELVAYVQSLCGLALLGDVREHVLPLMYGAGANGKGVILLVLQGLLGIADTG
GYSVSAPDGFLMAGNGTAHPTEIARLRGARLVVCSEQTSGRRFDEAKVKRLTGGDLLTGRFMRGDFFDFEPSHLTVVATN
HLPEVIEGGPSFWRRARLIPFDHVVPPERRDTELHTKLLSAEGPAILGWMVRGAMIVIGSGLVDPPRVLAATDDYRISED
SLASFVRDDCIVNPHAWCTVPDFRTRYEAHCAEMGVDPLSAKAVTTRLTREFPVQSDRLSRPSRRIYRGIGLVDADAESD
EETGR

Sequences:

>Translated_725_residues
MTTPPLERFSNAYTAATGWGIDPTRAQQDVRCPAHEDGSPSLSVGAGHDGRVLLTCQAGCDLDAILAAVELATADLFPPR
GEQAKPQIVASYPYTDEQGTRLFTVHRKEPGRDGSRKEFVQQAADGSWKTRGIRKPLYRLPEVVEAVKNGAVVWVVEGEK
DADRLASLSLTATTCPQGARKWKAEHTDSLSGAADVRVIADNDDPGRAHAAQVEAVLRPVVTSVSVWLPAAGKDVSDHLN
AGHGLDDLRPLAVDEGPAPGAASTAAASTVDAAELETDDANALRLVAEYGNTIRRVSDMGSWWRWTGKRWERDHDDAHVR
EAAKILARKLPAETLEQRKYKRASLSSTGLSGATRVAQSDPRVTVLARDLDAHPHLLNTQSGVVDLVTGAVKPHDPWLML
TRITPLDVDTEATHPMWSEFLAETFGGDTELVAYVQSLCGLALLGDVREHVLPLMYGAGANGKGVILLVLQGLLGIADTG
GYSVSAPDGFLMAGNGTAHPTEIARLRGARLVVCSEQTSGRRFDEAKVKRLTGGDLLTGRFMRGDFFDFEPSHLTVVATN
HLPEVIEGGPSFWRRARLIPFDHVVPPERRDTELHTKLLSAEGPAILGWMVRGAMIVIGSGLVDPPRVLAATDDYRISED
SLASFVRDDCIVNPHAWCTVPDFRTRYEAHCAEMGVDPLSAKAVTTRLTREFPVQSDRLSRPSRRIYRGIGLVDADAESD
EETGR
>Mature_724_residues
TTPPLERFSNAYTAATGWGIDPTRAQQDVRCPAHEDGSPSLSVGAGHDGRVLLTCQAGCDLDAILAAVELATADLFPPRG
EQAKPQIVASYPYTDEQGTRLFTVHRKEPGRDGSRKEFVQQAADGSWKTRGIRKPLYRLPEVVEAVKNGAVVWVVEGEKD
ADRLASLSLTATTCPQGARKWKAEHTDSLSGAADVRVIADNDDPGRAHAAQVEAVLRPVVTSVSVWLPAAGKDVSDHLNA
GHGLDDLRPLAVDEGPAPGAASTAAASTVDAAELETDDANALRLVAEYGNTIRRVSDMGSWWRWTGKRWERDHDDAHVRE
AAKILARKLPAETLEQRKYKRASLSSTGLSGATRVAQSDPRVTVLARDLDAHPHLLNTQSGVVDLVTGAVKPHDPWLMLT
RITPLDVDTEATHPMWSEFLAETFGGDTELVAYVQSLCGLALLGDVREHVLPLMYGAGANGKGVILLVLQGLLGIADTGG
YSVSAPDGFLMAGNGTAHPTEIARLRGARLVVCSEQTSGRRFDEAKVKRLTGGDLLTGRFMRGDFFDFEPSHLTVVATNH
LPEVIEGGPSFWRRARLIPFDHVVPPERRDTELHTKLLSAEGPAILGWMVRGAMIVIGSGLVDPPRVLAATDDYRISEDS
LASFVRDDCIVNPHAWCTVPDFRTRYEAHCAEMGVDPLSAKAVTTRLTREFPVQSDRLSRPSRRIYRGIGLVDADAESDE
ETGR

Specific function: Unknown

COG id: COG3378

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 78527; Mature: 78396

Theoretical pI: Translated: 5.80; Mature: 5.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTPPLERFSNAYTAATGWGIDPTRAQQDVRCPAHEDGSPSLSVGAGHDGRVLLTCQAGC
CCCCCHHHHCCCEEECCCCCCCHHHCCCCCCCCCCCCCCCCEEECCCCCCCEEEEECCCC
DLDAILAAVELATADLFPPRGEQAKPQIVASYPYTDEQGTRLFTVHRKEPGRDGSRKEFV
CHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCEEEEEECCCCCCCCHHHHHH
QQAADGSWKTRGIRKPLYRLPEVVEAVKNGAVVWVVEGEKDADRLASLSLTATTCPQGAR
HHHCCCCCHHCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHEEEEEECCCCCHHH
KWKAEHTDSLSGAADVRVIADNDDPGRAHAAQVEAVLRPVVTSVSVWLPAAGKDVSDHLN
HHCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHCC
AGHGLDDLRPLAVDEGPAPGAASTAAASTVDAAELETDDANALRLVAEYGNTIRRVSDMG
CCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHCC
SWWRWTGKRWERDHDDAHVREAAKILARKLPAETLEQRKYKRASLSSTGLSGATRVAQSD
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHCCC
PRVTVLARDLDAHPHLLNTQSGVVDLVTGAVKPHDPWLMLTRITPLDVDTEATHPMWSEF
CCEEEEEECCCCCCCEECCCCCHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHH
LAETFGGDTELVAYVQSLCGLALLGDVREHVLPLMYGAGANGKGVILLVLQGLLGIADTG
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCC
GYSVSAPDGFLMAGNGTAHPTEIARLRGARLVVCSEQTSGRRFDEAKVKRLTGGDLLTGR
CEEEECCCCEEEECCCCCCHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHCCCCCEEECE
FMRGDFFDFEPSHLTVVATNHLPEVIEGGPSFWRRARLIPFDHVVPPERRDTELHTKLLS
ECCCCCCCCCCCCEEEEECCCCCHHHHCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH
AEGPAILGWMVRGAMIVIGSGLVDPPRVLAATDDYRISEDSLASFVRDDCIVNPHAWCTV
CCCCHHHHHHHHCEEEEEECCCCCCCCEEEECCCCCCCHHHHHHHHHHHCEECCCCEEEC
PDFRTRYEAHCAEMGVDPLSAKAVTTRLTREFPVQSDRLSRPSRRIYRGIGLVDADAESD
CHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHCCCHHHHHHHHCCCEECCCCCC
EETGR
CCCCC
>Mature Secondary Structure 
TTPPLERFSNAYTAATGWGIDPTRAQQDVRCPAHEDGSPSLSVGAGHDGRVLLTCQAGC
CCCCHHHHCCCEEECCCCCCCHHHCCCCCCCCCCCCCCCCEEECCCCCCCEEEEECCCC
DLDAILAAVELATADLFPPRGEQAKPQIVASYPYTDEQGTRLFTVHRKEPGRDGSRKEFV
CHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCEEEEEECCCCCCCCHHHHHH
QQAADGSWKTRGIRKPLYRLPEVVEAVKNGAVVWVVEGEKDADRLASLSLTATTCPQGAR
HHHCCCCCHHCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHEEEEEECCCCCHHH
KWKAEHTDSLSGAADVRVIADNDDPGRAHAAQVEAVLRPVVTSVSVWLPAAGKDVSDHLN
HHCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHCC
AGHGLDDLRPLAVDEGPAPGAASTAAASTVDAAELETDDANALRLVAEYGNTIRRVSDMG
CCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHCC
SWWRWTGKRWERDHDDAHVREAAKILARKLPAETLEQRKYKRASLSSTGLSGATRVAQSD
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHCCC
PRVTVLARDLDAHPHLLNTQSGVVDLVTGAVKPHDPWLMLTRITPLDVDTEATHPMWSEF
CCEEEEEECCCCCCCEECCCCCHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHH
LAETFGGDTELVAYVQSLCGLALLGDVREHVLPLMYGAGANGKGVILLVLQGLLGIADTG
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCC
GYSVSAPDGFLMAGNGTAHPTEIARLRGARLVVCSEQTSGRRFDEAKVKRLTGGDLLTGR
CEEEECCCCEEEECCCCCCHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHCCCCCEEECE
FMRGDFFDFEPSHLTVVATNHLPEVIEGGPSFWRRARLIPFDHVVPPERRDTELHTKLLS
ECCCCCCCCCCCCEEEEECCCCCHHHHCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH
AEGPAILGWMVRGAMIVIGSGLVDPPRVLAATDDYRISEDSLASFVRDDCIVNPHAWCTV
CCCCHHHHHHHHCEEEEEECCCCCCCCEEEECCCCCCCHHHHHHHHHHHCEECCCCEEEC
PDFRTRYEAHCAEMGVDPLSAKAVTTRLTREFPVQSDRLSRPSRRIYRGIGLVDADAESD
CHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHCCCHHHHHHHHCCCEECCCCCC
EETGR
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA