Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is pstS1 [H]

Identifier: 158317988

GI number: 158317988

Start: 7585258

End: 7586790

Strand: Reverse

Name: pstS1 [H]

Synonym: Franean1_6248

Alternate gene names: 158317988

Gene position: 7586790-7585258 (Counterclockwise)

Preceding gene: 158317990

Following gene: 158317985

Centisome position: 84.47

GC content: 66.73

Gene sequence:

>1533_bases
GTGAGTTGGCTGAGCGCCGAGAATGCCGTGGCCGTGCTTACCGCGGCGCTCGGCATAGTGGCGTCCTTCGCGGTGGTCTG
GTACGAGCGCCGGGTGCCGCGCCGCAGGCGCATTGGCTACCGCGTGCAGATGGACATGCCCATCGGCGGTGACAACCGTG
ACGGGCAGGGCCAGGAAAACATACGGCTGGGCTTGTTCAACGATCTCCCCGACATGTCGGACGCCACCCTCGTCCTGCTG
CGGGTCGAGAATGACGGCGCGCAGAGCGTCGCCGGCAACGACTACACCGGCGGCGACCTGCATGGTCTCACCGCCGTCTT
CACGGATCGCATCGTCAGGGGTGTGACCGTCACCCAGCCCAACGCCGACCATCTCATGGAGCACTTCGCGCCTTCGAGGG
GGATGCGGCACAGCGGCAACACGATCTACCTGCCTCGTGTCCCGCTCGACAGGGGTGAGCACTACAAGCTTCTGGTGCTC
CTGACCGGCGGTAGCGTCGGCTGCGCCGTCCGCGTTGCCGGCGGGATCCAGGAAGGGGCGGTGAAGCCCAACCGGAGCAC
GACAGTCGATGACAAGCCGCCCCTGTTCAGCCGGCCCGCTCGCCTGATCACCATTGTGCTCACCCTCTGCGTCATGGTGC
TGGCGAGCATCATCGTCGTGGGCGACGGCCCACCTCCGCCCATCGGCTGCGCCACGGGGCGGCTGACCGTCAACGGGTCC
ACGGCCTTCGCGCCGGTGGTGCAGGAAATCGCCAGCAGATACGAGTCGGACTGCCCCGACTCGGACATCACCGTGGAGGC
GCGCGGCAGCAACGAAGGGGCGCTGCGGCTGGTGGAGGCGGGCGAGTCCGAAAAGGGATCCCCGGCCATGATCGTCATCC
ATGACGGTGCCCGTTCGCAGCTCGACGCGCGGCTTCAGGGGGAGCGGGTGGCCATTTCCGCCTTCGCCGTCGTGGTGAAC
GAAAAAGTGTCGGTCAGGAGCCTGACGATCGAGCAGATACGCCGCATCTACCGGGGTGATGTCGTCAACTGGAACCAGGT
CGGCGGCCCCGATCTCCCGATCCTGCTGGTGAGCCGTGACGCCAACTCCGGTACCCGTGACCTGTTCCGGCGCCGCATCC
TCGCCGGCATGGGCGAACCCGCCTTCACCTCGCAGGACTGCGAGCACAAGAATTTCCCACAGGACAAGGTCATCCGCTGT
GAGCTCGACAGCACCGAGCGGGTACTGAGAAACGTGGCGAGGCTGCCGGGTGCGGTCGGGTACGGCGAACTGCGTACCGC
CGAGGCCGTCGAGGGCCTGCACACCGTGCGCATCGACGGGCAGGAACCGTCGATCGAGGCGATCGGGAAAAGTGCCTATC
CCTTCGCGGAGGTCGAATACGCGTACACCTTCGGGCAGCCGCCCGCCGGCTCCCTCACCTTGAGCTTCCTCGACTACCTG
ACGAGGGGCGGCGGGCAGAACGCCATCAAGGATCACGGTGACCTGCCGTGCTACAGCCCGGAAGGCTTCAGACGTTGCCA
GGAGGGGTCCTGA

Upstream 100 bases:

>100_bases
GCGACCGAGTAGACCGTGGCTCTCTCCGCCCGTGTCGAGGCCCATACGGTACTCAAATCGACACGTCGGGCCGGTGGGGC
ATTCGGGGGCGAGTTGAATC

Downstream 100 bases:

>100_bases
ACCTCCACCGGCGACGGTGGGCGGGATGCCGACCGGAGTGAGACCTGGCGGAGCCTGACCAGATCGTGATCCGCGCGGTC
AGGACGGCAAGGATCTCCGC

Product: putative phosphate binding ABC transporter

Products: NA

Alternate protein names: PBP 1 [H]

Number of amino acids: Translated: 510; Mature: 509

Protein sequence:

>510_residues
MSWLSAENAVAVLTAALGIVASFAVVWYERRVPRRRRIGYRVQMDMPIGGDNRDGQGQENIRLGLFNDLPDMSDATLVLL
RVENDGAQSVAGNDYTGGDLHGLTAVFTDRIVRGVTVTQPNADHLMEHFAPSRGMRHSGNTIYLPRVPLDRGEHYKLLVL
LTGGSVGCAVRVAGGIQEGAVKPNRSTTVDDKPPLFSRPARLITIVLTLCVMVLASIIVVGDGPPPPIGCATGRLTVNGS
TAFAPVVQEIASRYESDCPDSDITVEARGSNEGALRLVEAGESEKGSPAMIVIHDGARSQLDARLQGERVAISAFAVVVN
EKVSVRSLTIEQIRRIYRGDVVNWNQVGGPDLPILLVSRDANSGTRDLFRRRILAGMGEPAFTSQDCEHKNFPQDKVIRC
ELDSTERVLRNVARLPGAVGYGELRTAEAVEGLHTVRIDGQEPSIEAIGKSAYPFAEVEYAYTFGQPPAGSLTLSFLDYL
TRGGGQNAIKDHGDLPCYSPEGFRRCQEGS

Sequences:

>Translated_510_residues
MSWLSAENAVAVLTAALGIVASFAVVWYERRVPRRRRIGYRVQMDMPIGGDNRDGQGQENIRLGLFNDLPDMSDATLVLL
RVENDGAQSVAGNDYTGGDLHGLTAVFTDRIVRGVTVTQPNADHLMEHFAPSRGMRHSGNTIYLPRVPLDRGEHYKLLVL
LTGGSVGCAVRVAGGIQEGAVKPNRSTTVDDKPPLFSRPARLITIVLTLCVMVLASIIVVGDGPPPPIGCATGRLTVNGS
TAFAPVVQEIASRYESDCPDSDITVEARGSNEGALRLVEAGESEKGSPAMIVIHDGARSQLDARLQGERVAISAFAVVVN
EKVSVRSLTIEQIRRIYRGDVVNWNQVGGPDLPILLVSRDANSGTRDLFRRRILAGMGEPAFTSQDCEHKNFPQDKVIRC
ELDSTERVLRNVARLPGAVGYGELRTAEAVEGLHTVRIDGQEPSIEAIGKSAYPFAEVEYAYTFGQPPAGSLTLSFLDYL
TRGGGQNAIKDHGDLPCYSPEGFRRCQEGS
>Mature_509_residues
SWLSAENAVAVLTAALGIVASFAVVWYERRVPRRRRIGYRVQMDMPIGGDNRDGQGQENIRLGLFNDLPDMSDATLVLLR
VENDGAQSVAGNDYTGGDLHGLTAVFTDRIVRGVTVTQPNADHLMEHFAPSRGMRHSGNTIYLPRVPLDRGEHYKLLVLL
TGGSVGCAVRVAGGIQEGAVKPNRSTTVDDKPPLFSRPARLITIVLTLCVMVLASIIVVGDGPPPPIGCATGRLTVNGST
AFAPVVQEIASRYESDCPDSDITVEARGSNEGALRLVEAGESEKGSPAMIVIHDGARSQLDARLQGERVAISAFAVVVNE
KVSVRSLTIEQIRRIYRGDVVNWNQVGGPDLPILLVSRDANSGTRDLFRRRILAGMGEPAFTSQDCEHKNFPQDKVIRCE
LDSTERVLRNVARLPGAVGYGELRTAEAVEGLHTVRIDGQEPSIEAIGKSAYPFAEVEYAYTFGQPPAGSLTLSFLDYLT
RGGGQNAIKDHGDLPCYSPEGFRRCQEGS

Specific function: Part of the ABC transporter complex pstSACB involved in phosphate import [H]

COG id: COG0226

COG function: function code P; ABC-type phosphate transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pstS family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011862 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55129; Mature: 54998

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: PS01295 ISPD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWLSAENAVAVLTAALGIVASFAVVWYERRVPRRRRIGYRVQMDMPIGGDNRDGQGQEN
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCEEEEEECCCCCCCCCCCCCCC
IRLGLFNDLPDMSDATLVLLRVENDGAQSVAGNDYTGGDLHGLTAVFTDRIVRGVTVTQP
EEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEECC
NADHLMEHFAPSRGMRHSGNTIYLPRVPLDRGEHYKLLVLLTGGSVGCAVRVAGGIQEGA
CHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEECCCCCEEEEEECCCHHCC
VKPNRSTTVDDKPPLFSRPARLITIVLTLCVMVLASIIVVGDGPPPPIGCATGRLTVNGS
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCEEEECCC
TAFAPVVQEIASRYESDCPDSDITVEARGSNEGALRLVEAGESEKGSPAMIVIHDGARSQ
CHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEEEEECCCCCCCCCEEEEEECCCCHH
LDARLQGERVAISAFAVVVNEKVSVRSLTIEQIRRIYRGDVVNWNQVGGPDLPILLVSRD
HHHHHCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECC
ANSGTRDLFRRRILAGMGEPAFTSQDCEHKNFPQDKVIRCELDSTERVLRNVARLPGAVG
CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCC
YGELRTAEAVEGLHTVRIDGQEPSIEAIGKSAYPFAEVEYAYTFGQPPAGSLTLSFLDYL
CCHHHHHHHHCCEEEEEECCCCCCHHHCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHH
TRGGGQNAIKDHGDLPCYSPEGFRRCQEGS
HCCCCCCCCCCCCCCCCCCCHHHHHHCCCC
>Mature Secondary Structure 
SWLSAENAVAVLTAALGIVASFAVVWYERRVPRRRRIGYRVQMDMPIGGDNRDGQGQEN
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCEEEEEECCCCCCCCCCCCCCC
IRLGLFNDLPDMSDATLVLLRVENDGAQSVAGNDYTGGDLHGLTAVFTDRIVRGVTVTQP
EEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEECC
NADHLMEHFAPSRGMRHSGNTIYLPRVPLDRGEHYKLLVLLTGGSVGCAVRVAGGIQEGA
CHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEECCCCCEEEEEECCCHHCC
VKPNRSTTVDDKPPLFSRPARLITIVLTLCVMVLASIIVVGDGPPPPIGCATGRLTVNGS
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCEEEECCC
TAFAPVVQEIASRYESDCPDSDITVEARGSNEGALRLVEAGESEKGSPAMIVIHDGARSQ
CHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEEEEECCCCCCCCCEEEEEECCCCHH
LDARLQGERVAISAFAVVVNEKVSVRSLTIEQIRRIYRGDVVNWNQVGGPDLPILLVSRD
HHHHHCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECC
ANSGTRDLFRRRILAGMGEPAFTSQDCEHKNFPQDKVIRCELDSTERVLRNVARLPGAVG
CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCC
YGELRTAEAVEGLHTVRIDGQEPSIEAIGKSAYPFAEVEYAYTFGQPPAGSLTLSFLDYL
CCHHHHHHHHCCEEEEEECCCCCCHHHCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHH
TRGGGQNAIKDHGDLPCYSPEGFRRCQEGS
HCCCCCCCCCCCCCCCCCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11463916 [H]