| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317975
Identifier: 158317975
GI number: 158317975
Start: 7572775
End: 7573389
Strand: Reverse
Name: 158317975
Synonym: Franean1_6235
Alternate gene names: NA
Gene position: 7573389-7572775 (Counterclockwise)
Preceding gene: 158317976
Following gene: 158317973
Centisome position: 84.32
GC content: 71.22
Gene sequence:
>615_bases ATGGGCTTCTACGACGATCAGGTGCTTCCCCGGTTCATCGACCTCGCCCTGGGCAGGCCCGTGGAGACCACCCGGGCCCG GGTGGTCTCCGGGCTGACCGGCGAGGTCCTGGAGATCGGGTTCGGCTCCGGGCGCAACCTGCCCCATCTCCCGCCGCAGG TCACCCGGCTGCTCGCCGTGGAACCCGCGGTGGTCGGTCGCAGGCTGGCCGCCGGTCGCCTCGCCGCCACCGCCGTCCCG GTCGAGTTCGTCGGCGACGACGGCCAGCGGCTCCCCGTCCCGGACACGTCGGTCGACCACGTACTGGTCACCTGGACGCT GTGCACCATCCCGGACGTCGAACGCGCGCTCGGTGAGGTGCGCAGGGTGCTGCGCCCCGGCGGGACGCTGCACTTCGTCG AACACGGCCGTTCGCCGAGACCCGGTGTCGCCCGGTGGCAGGACCGCCTCACTCCACTCTGGGGGCGGTGTTTCGGCGGC TGCCATCTGAACCGGCCGGTCGACAGGCTGATCGAGAACGCCGGGCTCACTCTCGACACCATCGAGACCTACCGGATGGG CGGGCCCGAGTTCTTCGGCTTCGCCTACGAGGGCATCGCGTCCAAAGCGGACTGA
Upstream 100 bases:
>100_bases ACCGCCGGCGCGGGAACAACGTGCCTTGATGGTCAGCCCGCGGCCGGGTACCAATGCCGGGACAGGGGGCCGGACACCCG TGTCGCGACAGGGAGAGACG
Downstream 100 bases:
>100_bases CAGCGGTGGTCGGCGCGGTCCCGGCATCGCGCCGCCTACTTCAGCCGGTCGTGCCGTCGGCGCAGAGGCGTGGGCGGGCG ACCTGGAACCCGGTGCCCGT
Product: type 11 methyltransferase
Products: NA
Alternate protein names: Methyltransferase; SAM-Dependent Methyltransferase; UbiE/COQ5 Family Methlytransferase; Methyltransferase UbiE/COQ5 Family; Ubiquinone/Menaquinone Biosynthesis Methyltransferase; Phosphatidylethanolamine N-Methyltransferase; Methyltransferase Domain Family; Phospholipid Methyltransferase; Sam Dependent Methyltransferase; Ubiquinone/Menaquinone Biosynthesis Methyltransferase UbiE; Methylase Involved In Ubiquinone/Menaquinone Biosynthesis; UbiE Ubiquinone/Menaquinone Biosynthesis Methyltransferase; Generic Methyltransferase; SAM-Dependent Methyltransferase UbiE/COQ5 Family; Ubiquinone/Menaquinone Biosynthesis Methyl Transferase; Methyltransferase Domain Family Protein; UbiE/COQ5 Methyltransferase; Response Regulator Receiver Protein
Number of amino acids: Translated: 204; Mature: 203
Protein sequence:
>204_residues MGFYDDQVLPRFIDLALGRPVETTRARVVSGLTGEVLEIGFGSGRNLPHLPPQVTRLLAVEPAVVGRRLAAGRLAATAVP VEFVGDDGQRLPVPDTSVDHVLVTWTLCTIPDVERALGEVRRVLRPGGTLHFVEHGRSPRPGVARWQDRLTPLWGRCFGG CHLNRPVDRLIENAGLTLDTIETYRMGGPEFFGFAYEGIASKAD
Sequences:
>Translated_204_residues MGFYDDQVLPRFIDLALGRPVETTRARVVSGLTGEVLEIGFGSGRNLPHLPPQVTRLLAVEPAVVGRRLAAGRLAATAVP VEFVGDDGQRLPVPDTSVDHVLVTWTLCTIPDVERALGEVRRVLRPGGTLHFVEHGRSPRPGVARWQDRLTPLWGRCFGG CHLNRPVDRLIENAGLTLDTIETYRMGGPEFFGFAYEGIASKAD >Mature_203_residues GFYDDQVLPRFIDLALGRPVETTRARVVSGLTGEVLEIGFGSGRNLPHLPPQVTRLLAVEPAVVGRRLAAGRLAATAVPV EFVGDDGQRLPVPDTSVDHVLVTWTLCTIPDVERALGEVRRVLRPGGTLHFVEHGRSPRPGVARWQDRLTPLWGRCFGGC HLNRPVDRLIENAGLTLDTIETYRMGGPEFFGFAYEGIASKAD
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI89145417, Length=170, Percent_Identity=33.5294117647059, Blast_Score=79, Evalue=2e-15, Organism=Homo sapiens, GI164663805, Length=179, Percent_Identity=32.9608938547486, Blast_Score=76, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22301; Mature: 22170
Theoretical pI: Translated: 7.05; Mature: 7.05
Prosite motif: PS01184 UBIE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFYDDQVLPRFIDLALGRPVETTRARVVSGLTGEVLEIGFGSGRNLPHLPPQVTRLLAV CCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHEEEECCCCCCCCCCCHHHHHHHHC EPAVVGRRLAAGRLAATAVPVEFVGDDGQRLPVPDTSVDHVLVTWTLCTIPDVERALGEV CHHHHHHHHHHCHHHHHHCCEEEECCCCCCCCCCCCCCCEEEEEEEEECCCHHHHHHHHH RRVLRPGGTLHFVEHGRSPRPGVARWQDRLTPLWGRCFGGCHLNRPVDRLIENAGLTLDT HHHHCCCCEEEEEECCCCCCCCHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHCCCEEEH IETYRMGGPEFFGFAYEGIASKAD HHHHHCCCCHHHHHHHHHHCCCCC >Mature Secondary Structure GFYDDQVLPRFIDLALGRPVETTRARVVSGLTGEVLEIGFGSGRNLPHLPPQVTRLLAV CCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHEEEECCCCCCCCCCCHHHHHHHHC EPAVVGRRLAAGRLAATAVPVEFVGDDGQRLPVPDTSVDHVLVTWTLCTIPDVERALGEV CHHHHHHHHHHCHHHHHHCCEEEECCCCCCCCCCCCCCCEEEEEEEEECCCHHHHHHHHH RRVLRPGGTLHFVEHGRSPRPGVARWQDRLTPLWGRCFGGCHLNRPVDRLIENAGLTLDT HHHHCCCCEEEEEECCCCCCCCHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHCCCEEEH IETYRMGGPEFFGFAYEGIASKAD HHHHHCCCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA