| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317942
Identifier: 158317942
GI number: 158317942
Start: 7532533
End: 7532943
Strand: Direct
Name: 158317942
Synonym: Franean1_6200
Alternate gene names: NA
Gene position: 7532533-7532943 (Clockwise)
Preceding gene: 158317941
Following gene: 158317946
Centisome position: 83.86
GC content: 74.94
Gene sequence:
>411_bases ATGCTCGAGACCACCGCGGCGCGTTATGCGGGCACCCGGGTCCAGCGGGTGGAGGACGGGCGCCTGCTCACCGGGCACGG CACGACCGAGGACGTCGGCCCGATGATCAACCCGAACGTCGTCGAGGGACAGATCGCCGGCGGAACCGTGCAGGGCATCG GCGGCGCCCTGCTGGAGACCCCCGCGCCCGGCCCGGGAGGCTACAAGGGGGTCGGCGAGGGCGGCGCGATCGGCTCGGCC CCGGCGGTCGTCAACGCCGTAACGGAGGTGCGTGGCCCGGAGCCCGTCCCGGTGAACCTGCTCGGGACGATCGCCGTGCC CGTGGCGAAGCGGGTGGCGCCGGTCGCAGCGGTGCTCGTTGTCGCCCTGTGGGTGATCCGGCGCGGAGGACGGGCCCAGC GCTCCCGCTGA
Upstream 100 bases:
>100_bases GGACGGCTAGAGTCGTGCGCCGGCGGCATGTGTGACGTACGCGGCATCTGTGACGTACGCGGTATGCCGGCCGGCCGGCG CACGAACGGAGCAGGTGCTC
Downstream 100 bases:
>100_bases GCGGGCCCGCGTCCGGGCAGGCCCGGCGCCCCCCGTGCGGGCGCCGTCCACTGCCCGGCTCCACCCGTCCAGGCAGCCCC GCCCGTCCAGGCGGCGCTAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 136; Mature: 136
Protein sequence:
>136_residues MLETTAARYAGTRVQRVEDGRLLTGHGTTEDVGPMINPNVVEGQIAGGTVQGIGGALLETPAPGPGGYKGVGEGGAIGSA PAVVNAVTEVRGPEPVPVNLLGTIAVPVAKRVAPVAAVLVVALWVIRRGGRAQRSR
Sequences:
>Translated_136_residues MLETTAARYAGTRVQRVEDGRLLTGHGTTEDVGPMINPNVVEGQIAGGTVQGIGGALLETPAPGPGGYKGVGEGGAIGSA PAVVNAVTEVRGPEPVPVNLLGTIAVPVAKRVAPVAAVLVVALWVIRRGGRAQRSR >Mature_136_residues MLETTAARYAGTRVQRVEDGRLLTGHGTTEDVGPMINPNVVEGQIAGGTVQGIGGALLETPAPGPGGYKGVGEGGAIGSA PAVVNAVTEVRGPEPVPVNLLGTIAVPVAKRVAPVAAVLVVALWVIRRGGRAQRSR
Specific function: Unknown
COG id: COG1529
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13690; Mature: 13690
Theoretical pI: Translated: 10.41; Mature: 10.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLETTAARYAGTRVQRVEDGRLLTGHGTTEDVGPMINPNVVEGQIAGGTVQGIGGALLET CCCCCCHHHHCCCEEEECCCEEEECCCCCCCCCCCCCCCEEECEECCCEECCCCCCEECC PAPGPGGYKGVGEGGAIGSAPAVVNAVTEVRGPEPVPVNLLGTIAVPVAKRVAPVAAVLV CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH VALWVIRRGGRAQRSR HHHHHHHCCCCCCCCC >Mature Secondary Structure MLETTAARYAGTRVQRVEDGRLLTGHGTTEDVGPMINPNVVEGQIAGGTVQGIGGALLET CCCCCCHHHHCCCEEEECCCEEEECCCCCCCCCCCCCCCEEECEECCCEECCCCCCEECC PAPGPGGYKGVGEGGAIGSAPAVVNAVTEVRGPEPVPVNLLGTIAVPVAKRVAPVAAVLV CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH VALWVIRRGGRAQRSR HHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA