| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317941
Identifier: 158317941
GI number: 158317941
Start: 7531687
End: 7532442
Strand: Direct
Name: 158317941
Synonym: Franean1_6199
Alternate gene names: NA
Gene position: 7531687-7532442 (Clockwise)
Preceding gene: 158317936
Following gene: 158317942
Centisome position: 83.85
GC content: 78.57
Gene sequence:
>756_bases ATGACCGGACACGCACCGGCCCGGATCGTCGCGGCCGTGCTCGCGGCGGGCGGCGGCAGCCGGATGGGCGCGCCGAAGGC CGAGCTCGTCGTGGGCGGGGCGCGGCTGGTGGACCGCGCGGTGGCCGCCGCGCGGGACGCCGGCTGCCACTGGATCATCA CGGTGGTCCGGGACGGCACGGCCGTTCCAGGCGCGGACGTCGTGGTGAACCCTGACCCCGGCCGCGGGCAGCGCAGCTCG CTCACACTCGCGCTGGACCGCGCCCGCGGCCCGGCGCCCACTGCCGATGCGGCGCCCACTGCCGATCTGGCACCGCCTGT CGGTCCCGCGGCCGGTCCGTTTGTGGACCCGGGTGCGGCCGCGGGCGCCGGTGCGGCGGGGGTGGACGCGGTCGCGGTGC TACTGGTCGACACCCCCGGGATCGGCGCGGACGCGGTGCGCGCCGTCCTGGCGTCCTGGCGGCCTGGCCGGGTCGCCGTC GGCCGCTACGGCGGCCGGCGCGGACATCCGATCGTCATGGCGCCGCGGCTGTGGCGTGAGGCGATCGCGCTCGCCGGTGC CGACGAGGGCGCGCGCCGCTTCCTCGCCGCGCACCCGGATCTGGTCGACGAGGTGCCGGTCCCGGGTGATCCCGCCGACC TCGACACCCCGGAGGATGTACGGCGCTGGCCCGGTTCCCGCTCGCCCGCGGCTGGCAGCGCGGCGGACACGTCCCTGCTG AGCGGACGCCCAGCACCGTCGGGCCCGGACGGCTAG
Upstream 100 bases:
>100_bases AAGTCACGTAACGGCATGACGGCGAGTATGACCACCGCCCCGGCCCGGTTCCCGCCACGCGGGCGGGACCAGACTGACCG ACGGGATCAGACTGGCCGGC
Downstream 100 bases:
>100_bases AGTCGTGCGCCGGCGGCATGTGTGACGTACGCGGCATCTGTGACGTACGCGGTATGCCGGCCGGCCGGCGCACGAACGGA GCAGGTGCTCATGCTCGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 251; Mature: 250
Protein sequence:
>251_residues MTGHAPARIVAAVLAAGGGSRMGAPKAELVVGGARLVDRAVAAARDAGCHWIITVVRDGTAVPGADVVVNPDPGRGQRSS LTLALDRARGPAPTADAAPTADLAPPVGPAAGPFVDPGAAAGAGAAGVDAVAVLLVDTPGIGADAVRAVLASWRPGRVAV GRYGGRRGHPIVMAPRLWREAIALAGADEGARRFLAAHPDLVDEVPVPGDPADLDTPEDVRRWPGSRSPAAGSAADTSLL SGRPAPSGPDG
Sequences:
>Translated_251_residues MTGHAPARIVAAVLAAGGGSRMGAPKAELVVGGARLVDRAVAAARDAGCHWIITVVRDGTAVPGADVVVNPDPGRGQRSS LTLALDRARGPAPTADAAPTADLAPPVGPAAGPFVDPGAAAGAGAAGVDAVAVLLVDTPGIGADAVRAVLASWRPGRVAV GRYGGRRGHPIVMAPRLWREAIALAGADEGARRFLAAHPDLVDEVPVPGDPADLDTPEDVRRWPGSRSPAAGSAADTSLL SGRPAPSGPDG >Mature_250_residues TGHAPARIVAAVLAAGGGSRMGAPKAELVVGGARLVDRAVAAARDAGCHWIITVVRDGTAVPGADVVVNPDPGRGQRSSL TLALDRARGPAPTADAAPTADLAPPVGPAAGPFVDPGAAAGAGAAGVDAVAVLLVDTPGIGADAVRAVLASWRPGRVAVG RYGGRRGHPIVMAPRLWREAIALAGADEGARRFLAAHPDLVDEVPVPGDPADLDTPEDVRRWPGSRSPAAGSAADTSLLS GRPAPSGPDG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24836; Mature: 24705
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGHAPARIVAAVLAAGGGSRMGAPKAELVVGGARLVDRAVAAARDAGCHWIITVVRDGT CCCCHHHHHHHHHHHCCCCCCCCCCCHHEEECHHHHHHHHHHHHHCCCCEEEEEEEECCC AVPGADVVVNPDPGRGQRSSLTLALDRARGPAPTADAAPTADLAPPVGPAAGPFVDPGAA CCCCCCEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AGAGAAGVDAVAVLLVDTPGIGADAVRAVLASWRPGRVAVGRYGGRRGHPIVMAPRLWRE CCCCCCCCCEEEEEEEECCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCEEECHHHHHH AIALAGADEGARRFLAAHPDLVDEVPVPGDPADLDTPEDVRRWPGSRSPAAGSAADTSLL HHHHCCCCHHHHHHHHCCCCHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHH SGRPAPSGPDG CCCCCCCCCCC >Mature Secondary Structure TGHAPARIVAAVLAAGGGSRMGAPKAELVVGGARLVDRAVAAARDAGCHWIITVVRDGT CCCHHHHHHHHHHHCCCCCCCCCCCHHEEECHHHHHHHHHHHHHCCCCEEEEEEEECCC AVPGADVVVNPDPGRGQRSSLTLALDRARGPAPTADAAPTADLAPPVGPAAGPFVDPGAA CCCCCCEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AGAGAAGVDAVAVLLVDTPGIGADAVRAVLASWRPGRVAVGRYGGRRGHPIVMAPRLWRE CCCCCCCCCEEEEEEEECCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCEEECHHHHHH AIALAGADEGARRFLAAHPDLVDEVPVPGDPADLDTPEDVRRWPGSRSPAAGSAADTSLL HHHHCCCCHHHHHHHHCCCCHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHH SGRPAPSGPDG CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA