| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317937
Identifier: 158317937
GI number: 158317937
Start: 7527390
End: 7528361
Strand: Reverse
Name: 158317937
Synonym: Franean1_6195
Alternate gene names: NA
Gene position: 7528361-7527390 (Counterclockwise)
Preceding gene: 158317938
Following gene: 158317935
Centisome position: 83.82
GC content: 69.75
Gene sequence:
>972_bases GTGCTGTTCGCCTTACGCTTCGACTTCCGTAATCCGGATCTCGCCGGTACGACCATGGCCGACCGTTACGCGGCGGCCCT CGACATGGCCGAGTGGGCTGACCAGCTGGGCTGCGTGACCATCGCGGTCTCGGAGCACCACGGCTCGCCGGACGGCTACC TTCCCAGCCCGATCCCGATGCTCGCGGCGATGGCCGCCCGCACCACCAAGGTGCGTTTCCGTATCGCGGCGCTCATCGCA CCGTTTCACGACCCGCTGCGCCTCGCCGAGGACCTGATCTTCCTCGACAACATCAGCAAGGGTCGCGTCGACCTGATCGT CGCGGGCGGGTACGTCCGCGAGGAGTTCGCCATGTTCGACATCCCGATGTCCGAACGCGGGCGTCGGGTGACCGAGACCG TGACGACCCTCAAGGCCGCGTTCTCCGGCGAGCCGTTCGAATACCGCGGCCGGACGGTCCACCTCACCCCCGGTCCCTTC CGCCCCGGCGGCCCGCAGATCTCGCTCGGTGGCAGCAGCGCGCCGGCCGCCCGTCGCGCGGCACGCATCGCCGACGGCTT CGTCCCCTCGGTGCCGGAGGTCTGGGAGTTCTACCGCGACGAGGTCCAGAAGCTCGGCCGGCCCGATCCCGGACCGAGCC CGATCGGCCCTAACCAGGTCATCGCGCTCGCGGAGGACGCCGACGAGGGCTGGAAGCGAATGTCGCCGTTCTTCCTCCAC GAGACGAACGCCTACGGCGTCTGGCAGGCCCAGAACAACGCGGCCTCTCCGTACCGCACGGCTGCCGATGCCGACCATCT GCGCACGACCGGGCAGTACCGGGTGCTGACGCCCGAGCAGCTCGTGGCCGAGCAGAAGGCCGCGTCATTCGCGTTCACCC AGCTCCACCCGCTGTGCGGGGGAATGCCGCCCGAGTCGGCGTGGGACAGCCTGCGCCTGTTCGAGCGCGAGGTTCTGCCG GCCTTCCGCTGA
Upstream 100 bases:
>100_bases GTAACCCATCCGCTTCGTTCGGTGACGTTCGGGCGTCGGCCCATGACGGCTGAACGTCGAGTGCCGATCGCACGGATCTG ATTCCTGTTACTCTCCGGCC
Downstream 100 bases:
>100_bases TCCGTCGCCCCGTCTGATCCGTACCCGTCGGCGGTCGACGCCGCTTCTGGTCGCTGGCGGACCGTACTGATCCCTGGTTC CCGAAATGCTGATGCCCGAA
Product: luciferase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 323; Mature: 323
Protein sequence:
>323_residues MLFALRFDFRNPDLAGTTMADRYAAALDMAEWADQLGCVTIAVSEHHGSPDGYLPSPIPMLAAMAARTTKVRFRIAALIA PFHDPLRLAEDLIFLDNISKGRVDLIVAGGYVREEFAMFDIPMSERGRRVTETVTTLKAAFSGEPFEYRGRTVHLTPGPF RPGGPQISLGGSSAPAARRAARIADGFVPSVPEVWEFYRDEVQKLGRPDPGPSPIGPNQVIALAEDADEGWKRMSPFFLH ETNAYGVWQAQNNAASPYRTAADADHLRTTGQYRVLTPEQLVAEQKAASFAFTQLHPLCGGMPPESAWDSLRLFEREVLP AFR
Sequences:
>Translated_323_residues MLFALRFDFRNPDLAGTTMADRYAAALDMAEWADQLGCVTIAVSEHHGSPDGYLPSPIPMLAAMAARTTKVRFRIAALIA PFHDPLRLAEDLIFLDNISKGRVDLIVAGGYVREEFAMFDIPMSERGRRVTETVTTLKAAFSGEPFEYRGRTVHLTPGPF RPGGPQISLGGSSAPAARRAARIADGFVPSVPEVWEFYRDEVQKLGRPDPGPSPIGPNQVIALAEDADEGWKRMSPFFLH ETNAYGVWQAQNNAASPYRTAADADHLRTTGQYRVLTPEQLVAEQKAASFAFTQLHPLCGGMPPESAWDSLRLFEREVLP AFR >Mature_323_residues MLFALRFDFRNPDLAGTTMADRYAAALDMAEWADQLGCVTIAVSEHHGSPDGYLPSPIPMLAAMAARTTKVRFRIAALIA PFHDPLRLAEDLIFLDNISKGRVDLIVAGGYVREEFAMFDIPMSERGRRVTETVTTLKAAFSGEPFEYRGRTVHLTPGPF RPGGPQISLGGSSAPAARRAARIADGFVPSVPEVWEFYRDEVQKLGRPDPGPSPIGPNQVIALAEDADEGWKRMSPFFLH ETNAYGVWQAQNNAASPYRTAADADHLRTTGQYRVLTPEQLVAEQKAASFAFTQLHPLCGGMPPESAWDSLRLFEREVLP AFR
Specific function: Unknown
COG id: COG2141
COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial luciferase oxidoreductase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011251 - InterPro: IPR016048 [H]
Pfam domain/function: PF00296 Bac_luciferase [H]
EC number: NA
Molecular weight: Translated: 35574; Mature: 35574
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFALRFDFRNPDLAGTTMADRYAAALDMAEWADQLGCVTIAVSEHHGSPDGYLPSPIPM CEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCHHH LAAMAARTTKVRFRIAALIAPFHDPLRLAEDLIFLDNISKGRVDLIVAGGYVREEFAMFD HHHHHHHHHHHHHEEEHHHHCCCCHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHEEEE IPMSERGRRVTETVTTLKAAFSGEPFEYRGRTVHLTPGPFRPGGPQISLGGSSAPAARRA CCHHHCCCHHHHHHHHHHHHHCCCCCEECCCEEEECCCCCCCCCCEEEECCCCCHHHHHH ARIADGFVPSVPEVWEFYRDEVQKLGRPDPGPSPIGPNQVIALAEDADEGWKRMSPFFLH HHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCHHHHHHCCCEEEE ETNAYGVWQAQNNAASPYRTAADADHLRTTGQYRVLTPEQLVAEQKAASFAFTQLHPLCG ECCCCEEEEECCCCCCCCCCCCCHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHC GMPPESAWDSLRLFEREVLPAFR CCCCHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MLFALRFDFRNPDLAGTTMADRYAAALDMAEWADQLGCVTIAVSEHHGSPDGYLPSPIPM CEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCHHH LAAMAARTTKVRFRIAALIAPFHDPLRLAEDLIFLDNISKGRVDLIVAGGYVREEFAMFD HHHHHHHHHHHHHEEEHHHHCCCCHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHEEEE IPMSERGRRVTETVTTLKAAFSGEPFEYRGRTVHLTPGPFRPGGPQISLGGSSAPAARRA CCHHHCCCHHHHHHHHHHHHHCCCCCEECCCEEEECCCCCCCCCCEEEECCCCCHHHHHH ARIADGFVPSVPEVWEFYRDEVQKLGRPDPGPSPIGPNQVIALAEDADEGWKRMSPFFLH HHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCHHHHHHCCCEEEE ETNAYGVWQAQNNAASPYRTAADADHLRTTGQYRVLTPEQLVAEQKAASFAFTQLHPLCG ECCCCEEEEECCCCCCCCCCCCCHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHC GMPPESAWDSLRLFEREVLPAFR CCCCHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]