Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is senX3 [H]

Identifier: 158317888

GI number: 158317888

Start: 7477811

End: 7479208

Strand: Reverse

Name: senX3 [H]

Synonym: Franean1_6146

Alternate gene names: 158317888

Gene position: 7479208-7477811 (Counterclockwise)

Preceding gene: 158317890

Following gene: 158317887

Centisome position: 83.27

GC content: 72.96

Gene sequence:

>1398_bases
ATGGCACGGCGGCCTGACTCGGCTGATCGGGGCGGTGCGACGGACGCCGGCCCCCGCGGCGCGGCGGCGGCCGCCACCGG
CCCGCACGCGCTGCCCGCCCACCTCGTCCGACAGGTGATCGCCGGCCTGCCCTCCGGGCTGGTGGTGGTGAACGCCGAGG
ACGTGGTCGTGCTGGTCAACTCCGCCGCCCGCCGGATGGGTGTCGTCGACGGTGACGAACTCAGCGTGGGCGAGGTGGCG
GATCTGGTGAAGGCCTGCCGGTCCGCCGCGGCCGAGCGCAACCGCCAGCTGGACCTGCCGCCGGTGCCCGAGCCACCGCT
GACCAGGGCCCGTCCGGACCAGACCGCGCTGGCCGTCTGGGCATACGCGCGCCCGCTCGGTGACAGCGGGTACGTCTCGG
TCCTGCTCGACGACATCACCGACTCGCGGCGGGTCGAGGCCGTCCGGCGCGATTTCGTCGCCAACGTCAGCCACGAGCTC
AAGACGCCCGTCGGGGCGCTGCACGTGCTCGCGGAGGCGGTCAGCGAGGCCAGCGAGGACCCGGTGGCCGTGCGCCGTTT
CGCGTCGCGGATGACGCACGAGTCCACCCGGCTGGCCCGGCTGGTCCAGGAGATCATCGACCTCTCCCGGCTGCAGGGCG
CCGAGCCGATGCCCGACCTGGCCCCGGTGCCGGTCTCGGTGGTGCTCGCGGAGGCCGTCGACCGGAACCGGTTCAGCGCG
CAGGCGCAGGAGATCTCGGTCGCCGTCATCGGCGCTGGCGGGCTGCGGGTCCGCGGCGACGAGAACCAGCTGGTCACCGC
CGTGGCGAACCTGCTGGACAACGCCATCAGCTACTCGCCGCGCGGCACACGGGTCGTGCTGGGAGTCCGCCAGGTCGGCG
GAACAATAGAGATATCAGTCGCGGACGAGGGAATCGGCATCGCCGAGAAGGACCTGGAACGGGTCTTCGAGCGTTTCTAC
CGCGCCGACCCGGCGCGTTCCCGGGCGACCGGGGGAACTGGTCTCGGCCTGGCTATCGTGAAGCACATCGCGACCAACCA
CGGCGGTTCGGTGAGCGTGTGGAGCGCGGAGGGTCGGGGCTCGACGTTCACGCTGCGCCTGCCCTCCGGTACCGACGATC
CCAAGGCGGCCGGGTCCGAAACAGGCCGCTCCGAAACAGGCCGTGCGGGGAAGTCCGGCGGCACGGTCGAGCCTGGTGGC
GCGGCGCCGTCGCGGCCGAGCGGTGTCGTTCCGTTGCGGCCGCCAGTCGATGCACCCGATCTCGCCGATTCCGCGTCGCG
GGGCCCGGTCCTGGCGGAAACTGTGCACGAATCAACTGGTCGCACCCGGCCGGCGGCGGCCGCTCCGGTCGCGTCCGAGA
ATTCCTCCGGAACCGGCCCCGGCGGCCCCGGAGCATGA

Upstream 100 bases:

>100_bases
ATGACAACCGGTCACGTCGCGTTTCGTCGGGGTTGGCCCTGCAGGGCCGGTACGGGTGCCCTCGACGGTCGGGTCGCGGC
ATCGTGGAGGGGACGCGGCG

Downstream 100 bases:

>100_bases
TCCGGAGCCGGTATTCCAACCGGCTTTTCAGCGGTGGCCCCTGTTCCCGGCACCGGCCGTAAAACGGTGTGACACCGCGC
GGTGAAACATTTCGTCCCCG

Product: histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 465; Mature: 464

Protein sequence:

>465_residues
MARRPDSADRGGATDAGPRGAAAAATGPHALPAHLVRQVIAGLPSGLVVVNAEDVVVLVNSAARRMGVVDGDELSVGEVA
DLVKACRSAAAERNRQLDLPPVPEPPLTRARPDQTALAVWAYARPLGDSGYVSVLLDDITDSRRVEAVRRDFVANVSHEL
KTPVGALHVLAEAVSEASEDPVAVRRFASRMTHESTRLARLVQEIIDLSRLQGAEPMPDLAPVPVSVVLAEAVDRNRFSA
QAQEISVAVIGAGGLRVRGDENQLVTAVANLLDNAISYSPRGTRVVLGVRQVGGTIEISVADEGIGIAEKDLERVFERFY
RADPARSRATGGTGLGLAIVKHIATNHGGSVSVWSAEGRGSTFTLRLPSGTDDPKAAGSETGRSETGRAGKSGGTVEPGG
AAPSRPSGVVPLRPPVDAPDLADSASRGPVLAETVHESTGRTRPAAAAPVASENSSGTGPGGPGA

Sequences:

>Translated_465_residues
MARRPDSADRGGATDAGPRGAAAAATGPHALPAHLVRQVIAGLPSGLVVVNAEDVVVLVNSAARRMGVVDGDELSVGEVA
DLVKACRSAAAERNRQLDLPPVPEPPLTRARPDQTALAVWAYARPLGDSGYVSVLLDDITDSRRVEAVRRDFVANVSHEL
KTPVGALHVLAEAVSEASEDPVAVRRFASRMTHESTRLARLVQEIIDLSRLQGAEPMPDLAPVPVSVVLAEAVDRNRFSA
QAQEISVAVIGAGGLRVRGDENQLVTAVANLLDNAISYSPRGTRVVLGVRQVGGTIEISVADEGIGIAEKDLERVFERFY
RADPARSRATGGTGLGLAIVKHIATNHGGSVSVWSAEGRGSTFTLRLPSGTDDPKAAGSETGRSETGRAGKSGGTVEPGG
AAPSRPSGVVPLRPPVDAPDLADSASRGPVLAETVHESTGRTRPAAAAPVASENSSGTGPGGPGA
>Mature_464_residues
ARRPDSADRGGATDAGPRGAAAAATGPHALPAHLVRQVIAGLPSGLVVVNAEDVVVLVNSAARRMGVVDGDELSVGEVAD
LVKACRSAAAERNRQLDLPPVPEPPLTRARPDQTALAVWAYARPLGDSGYVSVLLDDITDSRRVEAVRRDFVANVSHELK
TPVGALHVLAEAVSEASEDPVAVRRFASRMTHESTRLARLVQEIIDLSRLQGAEPMPDLAPVPVSVVLAEAVDRNRFSAQ
AQEISVAVIGAGGLRVRGDENQLVTAVANLLDNAISYSPRGTRVVLGVRQVGGTIEISVADEGIGIAEKDLERVFERFYR
ADPARSRATGGTGLGLAIVKHIATNHGGSVSVWSAEGRGSTFTLRLPSGTDDPKAAGSETGRSETGRAGKSGGTVEPGGA
APSRPSGVVPLRPPVDAPDLADSASRGPVLAETVHESTGRTRPAAAAPVASENSSGTGPGGPGA

Specific function: Part of the two-component regulatory system senX3/regX3. Phosphorylates regX3 under conditions of phosphate limitation. Probably does not itself sense phosphate concentrations, which may be relayed to senX3 by the pstSCAB phosphate transporter system [H]

COG id: COG0642

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI1786600, Length=233, Percent_Identity=35.6223175965665, Blast_Score=149, Evalue=3e-37,
Organism=Escherichia coli, GI1786783, Length=230, Percent_Identity=31.7391304347826, Blast_Score=113, Evalue=2e-26,
Organism=Escherichia coli, GI1789149, Length=273, Percent_Identity=30.03663003663, Blast_Score=111, Evalue=8e-26,
Organism=Escherichia coli, GI1788393, Length=233, Percent_Identity=30.9012875536481, Blast_Score=110, Evalue=2e-25,
Organism=Escherichia coli, GI145693157, Length=244, Percent_Identity=31.9672131147541, Blast_Score=105, Evalue=9e-24,
Organism=Escherichia coli, GI48994928, Length=238, Percent_Identity=28.1512605042017, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI1790436, Length=264, Percent_Identity=28.030303030303, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI1790346, Length=215, Percent_Identity=30.2325581395349, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI1789403, Length=212, Percent_Identity=34.9056603773585, Blast_Score=93, Evalue=3e-20,
Organism=Escherichia coli, GI1788279, Length=218, Percent_Identity=27.0642201834862, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI1790861, Length=217, Percent_Identity=28.5714285714286, Blast_Score=79, Evalue=8e-16,
Organism=Escherichia coli, GI1787894, Length=238, Percent_Identity=31.5126050420168, Blast_Score=78, Evalue=1e-15,
Organism=Escherichia coli, GI87082128, Length=234, Percent_Identity=24.3589743589744, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI1788713, Length=233, Percent_Identity=25.3218884120172, Blast_Score=72, Evalue=8e-14,
Organism=Escherichia coli, GI1789808, Length=222, Percent_Identity=30.1801801801802, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1788549, Length=247, Percent_Identity=25.5060728744939, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1790551, Length=208, Percent_Identity=29.8076923076923, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI87081816, Length=231, Percent_Identity=27.7056277056277, Blast_Score=63, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 47902; Mature: 47771

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARRPDSADRGGATDAGPRGAAAAATGPHALPAHLVRQVIAGLPSGLVVVNAEDVVVLVN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCEEEEEC
SAARRMGVVDGDELSVGEVADLVKACRSAAAERNRQLDLPPVPEPPLTRARPDQTALAVW
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHEEHH
AYARPLGDSGYVSVLLDDITDSRRVEAVRRDFVANVSHELKTPVGALHVLAEAVSEASED
HHHCCCCCCCEEEEEEHHCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCC
PVAVRRFASRMTHESTRLARLVQEIIDLSRLQGAEPMPDLAPVPVSVVLAEAVDRNRFSA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
QAQEISVAVIGAGGLRVRGDENQLVTAVANLLDNAISYSPRGTRVVLGVRQVGGTIEISV
HHHHEEEEEEECCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEE
ADEGIGIAEKDLERVFERFYRADPARSRATGGTGLGLAIVKHIATNHGGSVSVWSAEGRG
CCCCCCCCHHHHHHHHHHHHCCCCCHHCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCC
STFTLRLPSGTDDPKAAGSETGRSETGRAGKSGGTVEPGGAAPSRPSGVVPLRPPVDAPD
CEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCC
LADSASRGPVLAETVHESTGRTRPAAAAPVASENSSGTGPGGPGA
CCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ARRPDSADRGGATDAGPRGAAAAATGPHALPAHLVRQVIAGLPSGLVVVNAEDVVVLVN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCEEEEEC
SAARRMGVVDGDELSVGEVADLVKACRSAAAERNRQLDLPPVPEPPLTRARPDQTALAVW
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHEEHH
AYARPLGDSGYVSVLLDDITDSRRVEAVRRDFVANVSHELKTPVGALHVLAEAVSEASED
HHHCCCCCCCEEEEEEHHCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCC
PVAVRRFASRMTHESTRLARLVQEIIDLSRLQGAEPMPDLAPVPVSVVLAEAVDRNRFSA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
QAQEISVAVIGAGGLRVRGDENQLVTAVANLLDNAISYSPRGTRVVLGVRQVGGTIEISV
HHHHEEEEEEECCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEE
ADEGIGIAEKDLERVFERFYRADPARSRATGGTGLGLAIVKHIATNHGGSVSVWSAEGRG
CCCCCCCCHHHHHHHHHHHHCCCCCHHCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCC
STFTLRLPSGTDDPKAAGSETGRSETGRAGKSGGTVEPGGAAPSRPSGVVPLRPPVDAPD
CEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCC
LADSASRGPVLAETVHESTGRTRPAAAAPVASENSSGTGPGGPGA
CCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA