| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is senX3 [H]
Identifier: 158317888
GI number: 158317888
Start: 7477811
End: 7479208
Strand: Reverse
Name: senX3 [H]
Synonym: Franean1_6146
Alternate gene names: 158317888
Gene position: 7479208-7477811 (Counterclockwise)
Preceding gene: 158317890
Following gene: 158317887
Centisome position: 83.27
GC content: 72.96
Gene sequence:
>1398_bases ATGGCACGGCGGCCTGACTCGGCTGATCGGGGCGGTGCGACGGACGCCGGCCCCCGCGGCGCGGCGGCGGCCGCCACCGG CCCGCACGCGCTGCCCGCCCACCTCGTCCGACAGGTGATCGCCGGCCTGCCCTCCGGGCTGGTGGTGGTGAACGCCGAGG ACGTGGTCGTGCTGGTCAACTCCGCCGCCCGCCGGATGGGTGTCGTCGACGGTGACGAACTCAGCGTGGGCGAGGTGGCG GATCTGGTGAAGGCCTGCCGGTCCGCCGCGGCCGAGCGCAACCGCCAGCTGGACCTGCCGCCGGTGCCCGAGCCACCGCT GACCAGGGCCCGTCCGGACCAGACCGCGCTGGCCGTCTGGGCATACGCGCGCCCGCTCGGTGACAGCGGGTACGTCTCGG TCCTGCTCGACGACATCACCGACTCGCGGCGGGTCGAGGCCGTCCGGCGCGATTTCGTCGCCAACGTCAGCCACGAGCTC AAGACGCCCGTCGGGGCGCTGCACGTGCTCGCGGAGGCGGTCAGCGAGGCCAGCGAGGACCCGGTGGCCGTGCGCCGTTT CGCGTCGCGGATGACGCACGAGTCCACCCGGCTGGCCCGGCTGGTCCAGGAGATCATCGACCTCTCCCGGCTGCAGGGCG CCGAGCCGATGCCCGACCTGGCCCCGGTGCCGGTCTCGGTGGTGCTCGCGGAGGCCGTCGACCGGAACCGGTTCAGCGCG CAGGCGCAGGAGATCTCGGTCGCCGTCATCGGCGCTGGCGGGCTGCGGGTCCGCGGCGACGAGAACCAGCTGGTCACCGC CGTGGCGAACCTGCTGGACAACGCCATCAGCTACTCGCCGCGCGGCACACGGGTCGTGCTGGGAGTCCGCCAGGTCGGCG GAACAATAGAGATATCAGTCGCGGACGAGGGAATCGGCATCGCCGAGAAGGACCTGGAACGGGTCTTCGAGCGTTTCTAC CGCGCCGACCCGGCGCGTTCCCGGGCGACCGGGGGAACTGGTCTCGGCCTGGCTATCGTGAAGCACATCGCGACCAACCA CGGCGGTTCGGTGAGCGTGTGGAGCGCGGAGGGTCGGGGCTCGACGTTCACGCTGCGCCTGCCCTCCGGTACCGACGATC CCAAGGCGGCCGGGTCCGAAACAGGCCGCTCCGAAACAGGCCGTGCGGGGAAGTCCGGCGGCACGGTCGAGCCTGGTGGC GCGGCGCCGTCGCGGCCGAGCGGTGTCGTTCCGTTGCGGCCGCCAGTCGATGCACCCGATCTCGCCGATTCCGCGTCGCG GGGCCCGGTCCTGGCGGAAACTGTGCACGAATCAACTGGTCGCACCCGGCCGGCGGCGGCCGCTCCGGTCGCGTCCGAGA ATTCCTCCGGAACCGGCCCCGGCGGCCCCGGAGCATGA
Upstream 100 bases:
>100_bases ATGACAACCGGTCACGTCGCGTTTCGTCGGGGTTGGCCCTGCAGGGCCGGTACGGGTGCCCTCGACGGTCGGGTCGCGGC ATCGTGGAGGGGACGCGGCG
Downstream 100 bases:
>100_bases TCCGGAGCCGGTATTCCAACCGGCTTTTCAGCGGTGGCCCCTGTTCCCGGCACCGGCCGTAAAACGGTGTGACACCGCGC GGTGAAACATTTCGTCCCCG
Product: histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 465; Mature: 464
Protein sequence:
>465_residues MARRPDSADRGGATDAGPRGAAAAATGPHALPAHLVRQVIAGLPSGLVVVNAEDVVVLVNSAARRMGVVDGDELSVGEVA DLVKACRSAAAERNRQLDLPPVPEPPLTRARPDQTALAVWAYARPLGDSGYVSVLLDDITDSRRVEAVRRDFVANVSHEL KTPVGALHVLAEAVSEASEDPVAVRRFASRMTHESTRLARLVQEIIDLSRLQGAEPMPDLAPVPVSVVLAEAVDRNRFSA QAQEISVAVIGAGGLRVRGDENQLVTAVANLLDNAISYSPRGTRVVLGVRQVGGTIEISVADEGIGIAEKDLERVFERFY RADPARSRATGGTGLGLAIVKHIATNHGGSVSVWSAEGRGSTFTLRLPSGTDDPKAAGSETGRSETGRAGKSGGTVEPGG AAPSRPSGVVPLRPPVDAPDLADSASRGPVLAETVHESTGRTRPAAAAPVASENSSGTGPGGPGA
Sequences:
>Translated_465_residues MARRPDSADRGGATDAGPRGAAAAATGPHALPAHLVRQVIAGLPSGLVVVNAEDVVVLVNSAARRMGVVDGDELSVGEVA DLVKACRSAAAERNRQLDLPPVPEPPLTRARPDQTALAVWAYARPLGDSGYVSVLLDDITDSRRVEAVRRDFVANVSHEL KTPVGALHVLAEAVSEASEDPVAVRRFASRMTHESTRLARLVQEIIDLSRLQGAEPMPDLAPVPVSVVLAEAVDRNRFSA QAQEISVAVIGAGGLRVRGDENQLVTAVANLLDNAISYSPRGTRVVLGVRQVGGTIEISVADEGIGIAEKDLERVFERFY RADPARSRATGGTGLGLAIVKHIATNHGGSVSVWSAEGRGSTFTLRLPSGTDDPKAAGSETGRSETGRAGKSGGTVEPGG AAPSRPSGVVPLRPPVDAPDLADSASRGPVLAETVHESTGRTRPAAAAPVASENSSGTGPGGPGA >Mature_464_residues ARRPDSADRGGATDAGPRGAAAAATGPHALPAHLVRQVIAGLPSGLVVVNAEDVVVLVNSAARRMGVVDGDELSVGEVAD LVKACRSAAAERNRQLDLPPVPEPPLTRARPDQTALAVWAYARPLGDSGYVSVLLDDITDSRRVEAVRRDFVANVSHELK TPVGALHVLAEAVSEASEDPVAVRRFASRMTHESTRLARLVQEIIDLSRLQGAEPMPDLAPVPVSVVLAEAVDRNRFSAQ AQEISVAVIGAGGLRVRGDENQLVTAVANLLDNAISYSPRGTRVVLGVRQVGGTIEISVADEGIGIAEKDLERVFERFYR ADPARSRATGGTGLGLAIVKHIATNHGGSVSVWSAEGRGSTFTLRLPSGTDDPKAAGSETGRSETGRAGKSGGTVEPGGA APSRPSGVVPLRPPVDAPDLADSASRGPVLAETVHESTGRTRPAAAAPVASENSSGTGPGGPGA
Specific function: Part of the two-component regulatory system senX3/regX3. Phosphorylates regX3 under conditions of phosphate limitation. Probably does not itself sense phosphate concentrations, which may be relayed to senX3 by the pstSCAB phosphate transporter system [H]
COG id: COG0642
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1786600, Length=233, Percent_Identity=35.6223175965665, Blast_Score=149, Evalue=3e-37, Organism=Escherichia coli, GI1786783, Length=230, Percent_Identity=31.7391304347826, Blast_Score=113, Evalue=2e-26, Organism=Escherichia coli, GI1789149, Length=273, Percent_Identity=30.03663003663, Blast_Score=111, Evalue=8e-26, Organism=Escherichia coli, GI1788393, Length=233, Percent_Identity=30.9012875536481, Blast_Score=110, Evalue=2e-25, Organism=Escherichia coli, GI145693157, Length=244, Percent_Identity=31.9672131147541, Blast_Score=105, Evalue=9e-24, Organism=Escherichia coli, GI48994928, Length=238, Percent_Identity=28.1512605042017, Blast_Score=97, Evalue=2e-21, Organism=Escherichia coli, GI1790436, Length=264, Percent_Identity=28.030303030303, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI1790346, Length=215, Percent_Identity=30.2325581395349, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI1789403, Length=212, Percent_Identity=34.9056603773585, Blast_Score=93, Evalue=3e-20, Organism=Escherichia coli, GI1788279, Length=218, Percent_Identity=27.0642201834862, Blast_Score=81, Evalue=1e-16, Organism=Escherichia coli, GI1790861, Length=217, Percent_Identity=28.5714285714286, Blast_Score=79, Evalue=8e-16, Organism=Escherichia coli, GI1787894, Length=238, Percent_Identity=31.5126050420168, Blast_Score=78, Evalue=1e-15, Organism=Escherichia coli, GI87082128, Length=234, Percent_Identity=24.3589743589744, Blast_Score=72, Evalue=5e-14, Organism=Escherichia coli, GI1788713, Length=233, Percent_Identity=25.3218884120172, Blast_Score=72, Evalue=8e-14, Organism=Escherichia coli, GI1789808, Length=222, Percent_Identity=30.1801801801802, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI1788549, Length=247, Percent_Identity=25.5060728744939, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1790551, Length=208, Percent_Identity=29.8076923076923, Blast_Score=65, Evalue=1e-11, Organism=Escherichia coli, GI87081816, Length=231, Percent_Identity=27.7056277056277, Blast_Score=63, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 47902; Mature: 47771
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARRPDSADRGGATDAGPRGAAAAATGPHALPAHLVRQVIAGLPSGLVVVNAEDVVVLVN CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCEEEEEC SAARRMGVVDGDELSVGEVADLVKACRSAAAERNRQLDLPPVPEPPLTRARPDQTALAVW HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHEEHH AYARPLGDSGYVSVLLDDITDSRRVEAVRRDFVANVSHELKTPVGALHVLAEAVSEASED HHHCCCCCCCEEEEEEHHCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCC PVAVRRFASRMTHESTRLARLVQEIIDLSRLQGAEPMPDLAPVPVSVVLAEAVDRNRFSA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH QAQEISVAVIGAGGLRVRGDENQLVTAVANLLDNAISYSPRGTRVVLGVRQVGGTIEISV HHHHEEEEEEECCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEE ADEGIGIAEKDLERVFERFYRADPARSRATGGTGLGLAIVKHIATNHGGSVSVWSAEGRG CCCCCCCCHHHHHHHHHHHHCCCCCHHCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCC STFTLRLPSGTDDPKAAGSETGRSETGRAGKSGGTVEPGGAAPSRPSGVVPLRPPVDAPD CEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCC LADSASRGPVLAETVHESTGRTRPAAAAPVASENSSGTGPGGPGA CCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure ARRPDSADRGGATDAGPRGAAAAATGPHALPAHLVRQVIAGLPSGLVVVNAEDVVVLVN CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCEEEEEC SAARRMGVVDGDELSVGEVADLVKACRSAAAERNRQLDLPPVPEPPLTRARPDQTALAVW HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHEEHH AYARPLGDSGYVSVLLDDITDSRRVEAVRRDFVANVSHELKTPVGALHVLAEAVSEASED HHHCCCCCCCEEEEEEHHCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCC PVAVRRFASRMTHESTRLARLVQEIIDLSRLQGAEPMPDLAPVPVSVVLAEAVDRNRFSA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH QAQEISVAVIGAGGLRVRGDENQLVTAVANLLDNAISYSPRGTRVVLGVRQVGGTIEISV HHHHEEEEEEECCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEE ADEGIGIAEKDLERVFERFYRADPARSRATGGTGLGLAIVKHIATNHGGSVSVWSAEGRG CCCCCCCCHHHHHHHHHHHHCCCCCHHCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCC STFTLRLPSGTDDPKAAGSETGRSETGRAGKSGGTVEPGGAAPSRPSGVVPLRPPVDAPD CEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCC LADSASRGPVLAETVHESTGRTRPAAAAPVASENSSGTGPGGPGA CCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA