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The map label for this gene is secY [H]

Identifier: 158317771

GI number: 158317771

Start: 7350558

End: 7351850

Strand: Reverse

Name: secY [H]

Synonym: Franean1_6029

Alternate gene names: 158317771

Gene position: 7351850-7350558 (Counterclockwise)

Preceding gene: 158317772

Following gene: 158317770

Centisome position: 81.85

GC content: 63.88

Gene sequence:

>1293_bases
GTGCTCACCGCCTTCACGCGGGCCTTCCGCACGCCCGACCTGCGGAAGAAACTGCTCTTCACCCTCGGCGTCGTCGTCCT
GTTCCGGTTCGGCAGCGTCATGCCGTCGCCCGGCGTCTCCACGGCGGCGGTGAACGCGTGTCTGGACTCGGCCAGCGCCG
AAAGCAACAACGTGTACTCGCTGATCAACCTCTTCAGCGGTGGCGCTCTCCTTCAGCTCTCGGTGTTCGCGCTCGGCATC
ATGCCGTACATCACCTCCAGCATCATCATCCAGCTTCTGGTGGTGGTGATTCCGCGGCTCGAGCAGCTCAAGAAGGAAGG
CAGCTCGGGTGAGCAGAAGCTCACCCAGTACACCCGTTACCTGACGGTCGCCCTGGGCATCCTCCAGGCCACCGGCATCG
TGGCGCTCGCCCGCAGCGGCCGGCTCTTCCCTGGCTGCAGCGCCCAGATCATCCCGGACACGAGCCTCTTCCGCATCGTC
ACCATCGTGATCACTATGACCGCTGGAACCGCGGTCATCATGTGGATGGGTGAGCTGATCACCGCCCGCGGCGTGGGCAA
CGGCATGTCCCTGCTGATCTTCACCTCGATCGCGGCGGCCCTGCCCTCCCAGGGCGGACGGATCCTCCAGGTCGCCGGTG
GCGTCGTGTTCGGTCTCGTGATCCTGCTCGGTCTGGCCATCGTCGTGTTCGTAGTGTTCGTCGAACAGTCGCAGCGCCGC
ATCCCGGTGCAGTACGCGAAGCGGCTGATCGGGCGCCGGATGTATGGCGGAACGTCGACCTACCTCCCGATCAAGGTGAA
CCAGGCCGGCATCATCCCGGTCATCTTCGCCTCCTCGCTGCTCCAGCTCCCACAGCTCGTGGGCCAGGTGTGGAGCAACC
AGACCTTCCAGGACTTCGAGCAGCGCTACCTGTCGCGCGGGGACCACCCGCTCTACCTCGTGGCCTACGGTGCGCTGATC
ATCTTCTTCACGTACTTCTATGTCGCGATCACCTTCAACCCGACGGAGGTCGCCGACAACATGAGGAAGTACGGCGGGTT
CATCCCCGGGATCCGACCCGGCCGGCCCACGGCCGAATACCTGGATCACGTGCTGTCCCGCATCACCCTCCCTGGCTCGC
TGTTCCTGGGGGTCATCACGGTGTTGCCGTTGGCGCTTCTCAACCTGACGAAGGACCAGCCCTTCCCGTTTGCTGGTACC
TCGGTTCTGATCATGGTGGGAGTGGGGCTGGAGACCGTGAAACAGATTGAAAGCCAGCTCATGCTGCGCAACTACGAAGG
ATTCCTCCGGTAG

Upstream 100 bases:

>100_bases
AGAGTCGCCTCACCGCGTACGGTCGGCTTCGGCGGCCAGCGGCGATCCGTACCGGACATCGAGTCCGTCCCGTCAGCCGT
AAGGATCAGCAGGAGGAGTC

Downstream 100 bases:

>100_bases
TGCGCCTCGTACTGGTCGGACCGCCAGGCGCCGGCAAGGGGACGCAGGCTGCCTTCATCGCGCAGGCGAGATCCATTCCG
AAGATCTCGACCGGCGACAT

Product: preprotein translocase subunit SecY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 430; Mature: 430

Protein sequence:

>430_residues
MLTAFTRAFRTPDLRKKLLFTLGVVVLFRFGSVMPSPGVSTAAVNACLDSASAESNNVYSLINLFSGGALLQLSVFALGI
MPYITSSIIIQLLVVVIPRLEQLKKEGSSGEQKLTQYTRYLTVALGILQATGIVALARSGRLFPGCSAQIIPDTSLFRIV
TIVITMTAGTAVIMWMGELITARGVGNGMSLLIFTSIAAALPSQGGRILQVAGGVVFGLVILLGLAIVVFVVFVEQSQRR
IPVQYAKRLIGRRMYGGTSTYLPIKVNQAGIIPVIFASSLLQLPQLVGQVWSNQTFQDFEQRYLSRGDHPLYLVAYGALI
IFFTYFYVAITFNPTEVADNMRKYGGFIPGIRPGRPTAEYLDHVLSRITLPGSLFLGVITVLPLALLNLTKDQPFPFAGT
SVLIMVGVGLETVKQIESQLMLRNYEGFLR

Sequences:

>Translated_430_residues
MLTAFTRAFRTPDLRKKLLFTLGVVVLFRFGSVMPSPGVSTAAVNACLDSASAESNNVYSLINLFSGGALLQLSVFALGI
MPYITSSIIIQLLVVVIPRLEQLKKEGSSGEQKLTQYTRYLTVALGILQATGIVALARSGRLFPGCSAQIIPDTSLFRIV
TIVITMTAGTAVIMWMGELITARGVGNGMSLLIFTSIAAALPSQGGRILQVAGGVVFGLVILLGLAIVVFVVFVEQSQRR
IPVQYAKRLIGRRMYGGTSTYLPIKVNQAGIIPVIFASSLLQLPQLVGQVWSNQTFQDFEQRYLSRGDHPLYLVAYGALI
IFFTYFYVAITFNPTEVADNMRKYGGFIPGIRPGRPTAEYLDHVLSRITLPGSLFLGVITVLPLALLNLTKDQPFPFAGT
SVLIMVGVGLETVKQIESQLMLRNYEGFLR
>Mature_430_residues
MLTAFTRAFRTPDLRKKLLFTLGVVVLFRFGSVMPSPGVSTAAVNACLDSASAESNNVYSLINLFSGGALLQLSVFALGI
MPYITSSIIIQLLVVVIPRLEQLKKEGSSGEQKLTQYTRYLTVALGILQATGIVALARSGRLFPGCSAQIIPDTSLFRIV
TIVITMTAGTAVIMWMGELITARGVGNGMSLLIFTSIAAALPSQGGRILQVAGGVVFGLVILLGLAIVVFVVFVEQSQRR
IPVQYAKRLIGRRMYGGTSTYLPIKVNQAGIIPVIFASSLLQLPQLVGQVWSNQTFQDFEQRYLSRGDHPLYLVAYGALI
IFFTYFYVAITFNPTEVADNMRKYGGFIPGIRPGRPTAEYLDHVLSRITLPGSLFLGVITVLPLALLNLTKDQPFPFAGT
SVLIMVGVGLETVKQIESQLMLRNYEGFLR

Specific function: Involved in protein export. Interacts with secA and secE to allow the translocation of proteins across the plasma membrane, by forming part of a channel [H]

COG id: COG0201

COG function: function code U; Preprotein translocase subunit SecY

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secY/SEC61-alpha family [H]

Homologues:

Organism=Escherichia coli, GI1789696, Length=426, Percent_Identity=44.131455399061, Blast_Score=296, Evalue=1e-81,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002208
- InterPro:   IPR023201 [H]

Pfam domain/function: PF00344 SecY [H]

EC number: NA

Molecular weight: Translated: 46771; Mature: 46771

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: PS00755 SECY_1 ; PS00756 SECY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTAFTRAFRTPDLRKKLLFTLGVVVLFRFGSVMPSPGVSTAAVNACLDSASAESNNVYS
CCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCHHH
LINLFSGGALLQLSVFALGIMPYITSSIIIQLLVVVIPRLEQLKKEGSSGEQKLTQYTRY
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
LTVALGILQATGIVALARSGRLFPGCSAQIIPDTSLFRIVTIVITMTAGTAVIMWMGELI
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHH
TARGVGNGMSLLIFTSIAAALPSQGGRILQVAGGVVFGLVILLGLAIVVFVVFVEQSQRR
HHCCCCCCHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
IPVQYAKRLIGRRMYGGTSTYLPIKVNQAGIIPVIFASSLLQLPQLVGQVWSNQTFQDFE
CCHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
QRYLSRGDHPLYLVAYGALIIFFTYFYVAITFNPTEVADNMRKYGGFIPGIRPGRPTAEY
HHHHHCCCCCEEHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHCCCCCCCCCCCCHHHH
LDHVLSRITLPGSLFLGVITVLPLALLNLTKDQPFPFAGTSVLIMVGVGLETVKQIESQL
HHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHH
MLRNYEGFLR
HHHHHHHHCC
>Mature Secondary Structure
MLTAFTRAFRTPDLRKKLLFTLGVVVLFRFGSVMPSPGVSTAAVNACLDSASAESNNVYS
CCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCHHH
LINLFSGGALLQLSVFALGIMPYITSSIIIQLLVVVIPRLEQLKKEGSSGEQKLTQYTRY
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
LTVALGILQATGIVALARSGRLFPGCSAQIIPDTSLFRIVTIVITMTAGTAVIMWMGELI
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHH
TARGVGNGMSLLIFTSIAAALPSQGGRILQVAGGVVFGLVILLGLAIVVFVVFVEQSQRR
HHCCCCCCHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
IPVQYAKRLIGRRMYGGTSTYLPIKVNQAGIIPVIFASSLLQLPQLVGQVWSNQTFQDFE
CCHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
QRYLSRGDHPLYLVAYGALIIFFTYFYVAITFNPTEVADNMRKYGGFIPGIRPGRPTAEY
HHHHHCCCCCEEHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHCCCCCCCCCCCCHHHH
LDHVLSRITLPGSLFLGVITVLPLALLNLTKDQPFPFAGTSVLIMVGVGLETVKQIESQL
HHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHH
MLRNYEGFLR
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA