Click here to switch to the map view.

The map label for this gene is 158317755

Identifier: 158317755

GI number: 158317755

Start: 7333986

End: 7334417

Strand: Reverse

Name: 158317755

Synonym: Franean1_6013

Alternate gene names: NA

Gene position: 7334417-7333986 (Counterclockwise)

Preceding gene: 158317757

Following gene: 158317754

Centisome position: 81.66

GC content: 72.92

Gene sequence:

>432_bases
ATGGAGGGCGTCAGCCTCGCTTTGCTCGGCCGGGTGGAGCAGCTGCGGATCCGGCCGACCAACGCGTCGGGAACCGTCGA
CGACGACGGGCACCAGCAGGTCCGGCTGGAGGCTGGCGACGATGGTCCCGGCTCCACGTGCACCTGCTCCGACAGCTCGG
GCGGGGTCTTCTGCCGCCATGCCGTGGCGGTGGCGCTGGTCGCCACGGGCTCGGCCGGGATGGCGGAGGACGACGACGAG
GAGGACGGCCACGCCGAGGACCTCTTCGCCGACGATCCCGTGCACGCGGCGATCAGGGTGTTCCTGAGCCGCGTCCCGCG
GGCGGAGCTGGTCGAGACGCTCCTCGACGCCGCCGACGAGAACGAGGTCGTGGCGGACGTGCTCTGGGAGGCCACGGTGG
CCTGGCACGGCCGCCAGCACGGAGCCGTCTGA

Upstream 100 bases:

>100_bases
GGCGTCGGAGGGCGACGGGCACGGTGAGGGGGCGGTCACCCCCCTCGAGGCCGCCTTCGAGGAGCGCGCGTGTGCCCAGC
GCGCGGGCACTGCCGTCTTC

Downstream 100 bases:

>100_bases
CCGACGGGCCGCCGCGGTACGCGCGGCGCGGGGCCGTCCGGCATCGCGCCGCGCCTGGGGTCGATCTGCGCGACCGGGGG
CACTCCCGGCGGGAGCATGA

Product: zinc finger SWIM domain-containing protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MEGVSLALLGRVEQLRIRPTNASGTVDDDGHQQVRLEAGDDGPGSTCTCSDSSGGVFCRHAVAVALVATGSAGMAEDDDE
EDGHAEDLFADDPVHAAIRVFLSRVPRAELVETLLDAADENEVVADVLWEATVAWHGRQHGAV

Sequences:

>Translated_143_residues
MEGVSLALLGRVEQLRIRPTNASGTVDDDGHQQVRLEAGDDGPGSTCTCSDSSGGVFCRHAVAVALVATGSAGMAEDDDE
EDGHAEDLFADDPVHAAIRVFLSRVPRAELVETLLDAADENEVVADVLWEATVAWHGRQHGAV
>Mature_143_residues
MEGVSLALLGRVEQLRIRPTNASGTVDDDGHQQVRLEAGDDGPGSTCTCSDSSGGVFCRHAVAVALVATGSAGMAEDDDE
EDGHAEDLFADDPVHAAIRVFLSRVPRAELVETLLDAADENEVVADVLWEATVAWHGRQHGAV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15047; Mature: 15047

Theoretical pI: Translated: 4.06; Mature: 4.06

Prosite motif: PS00022 EGF_1 ; PS50966 ZF_SWIM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEGVSLALLGRVEQLRIRPTNASGTVDDDGHQQVRLEAGDDGPGSTCTCSDSSGGVFCRH
CCCCHHHHHCCHHHEEEEECCCCCCCCCCCCEEEEEECCCCCCCCEEEECCCCCCCHHHH
AVAVALVATGSAGMAEDDDEEDGHAEDLFADDPVHAAIRVFLSRVPRAELVETLLDAADE
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCC
NEVVADVLWEATVAWHGRQHGAV
CHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MEGVSLALLGRVEQLRIRPTNASGTVDDDGHQQVRLEAGDDGPGSTCTCSDSSGGVFCRH
CCCCHHHHHCCHHHEEEEECCCCCCCCCCCCEEEEEECCCCCCCCEEEECCCCCCCHHHH
AVAVALVATGSAGMAEDDDEEDGHAEDLFADDPVHAAIRVFLSRVPRAELVETLLDAADE
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCC
NEVVADVLWEATVAWHGRQHGAV
CHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA