| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317725
Identifier: 158317725
GI number: 158317725
Start: 7291658
End: 7292599
Strand: Direct
Name: 158317725
Synonym: Franean1_5983
Alternate gene names: NA
Gene position: 7291658-7292599 (Clockwise)
Preceding gene: 158317724
Following gene: 158317726
Centisome position: 81.18
GC content: 72.4
Gene sequence:
>942_bases GTGGCTTTCTGTAACGTCGTTGACCCAACCTGCCACGGGAGACAGGTCGTCACGAAGGGGACGGTCATCGACACTCGGCT GTTCACCTGGATCGGCGGCGCCCAGCTCGACGGCGTGAAGGGCCTCGTGGTCGAGGCCGCCTGCCTGGCCACCCACGCCG CGCTCTACCCGGCCGCGGCACTGCCGCGCCGGCGCCGCGACGACGACGGACTCGCCGACCGCTACCGGCTCGCCGGCCTG ACACCATTGCAACGCGGCCTGCTCATCGGCGATCCGATGGCGGCCGGGACGCCGATCCTGCTGGTGCACGGCCTCGTCGA CAACCGGTCCGTGTTCGCCCGGCTGGAACGCTCCCTGCGCCGCCGCGGCTTCACGACTGTGACCTCGGTGGACATCCCGC TGTTCGCGACGAGCGTCCAGGCGGCCGCGGCGCAGCTCGCCGAGACCGTCGAGCAGGTCGCCGGCCGCCACGGCGACACC GGCGTGCACATCGTCGCCCACTCGCTCGGCGGCCTGGTGGCCCGCTACTACGTGCAGCGGCTCGGCGGCGGCGACCACGT GCAGACCCTGGTCACGCTGGCGACGCCACACAACGGCACCCGGCTGGCGTGCCTGGTTCCGAAGGCCGTCTCCTACCGGC TCGTCAGCCAGCTCCGCCCCGGTTCACCGCTGCTGAGGGAGCTCGTCGAGCCGGCTCCCGGCGTCCGGACCCGCTTCATC GCCGTCGCCGGCGGCCTCGACACGGTGGTCCGCCCGGGCGAGGCGGCGCTCACCCATCCCGACCTGGTGACCGAGAACGT GGTCGTCGAGGGGGCGGGGCACCACGGCCTGCCGTTCAGCAGCGGGGTGGCGCACATGATCGCCCGCAGGCTGGCCACGG ACTCCGCCGGCGGTCGCCAACCGTCACAGACCACCACGAAAGTGCCACATCTTTGTGGCTAG
Upstream 100 bases:
>100_bases GGCCTGGCACACCGGGTGACCGAGGTGCTGACCGAGCTGACGATGCGCGACAGTGATGTCCGCCTTCGCCAACGAAGGGC AAAATGGTCGACAGGATTGG
Downstream 100 bases:
>100_bases CTAGGGGTATCTGTCCGAATCGCACGGTGTAGCCTCCTCATCGGTTTAGAGGTCCCCCTCCCCGACCGGTTTGTCCGGCG GATGCCTTGCGACCATGGGA
Product: PGAP1 family protein
Products: NA
Alternate protein names: Secreted Lipase; PGAP1 Family Protein; Alpha/Beta Hydrolase Fold Protein; Alpha/Beta Hydrolase Fold-Like Protein; Alpha/Beta Hydrolase Fold Acetyltransferase; Lipase Superfamily; PGAP1-Like Protein
Number of amino acids: Translated: 313; Mature: 312
Protein sequence:
>313_residues MAFCNVVDPTCHGRQVVTKGTVIDTRLFTWIGGAQLDGVKGLVVEAACLATHAALYPAAALPRRRRDDDGLADRYRLAGL TPLQRGLLIGDPMAAGTPILLVHGLVDNRSVFARLERSLRRRGFTTVTSVDIPLFATSVQAAAAQLAETVEQVAGRHGDT GVHIVAHSLGGLVARYYVQRLGGGDHVQTLVTLATPHNGTRLACLVPKAVSYRLVSQLRPGSPLLRELVEPAPGVRTRFI AVAGGLDTVVRPGEAALTHPDLVTENVVVEGAGHHGLPFSSGVAHMIARRLATDSAGGRQPSQTTTKVPHLCG
Sequences:
>Translated_313_residues MAFCNVVDPTCHGRQVVTKGTVIDTRLFTWIGGAQLDGVKGLVVEAACLATHAALYPAAALPRRRRDDDGLADRYRLAGL TPLQRGLLIGDPMAAGTPILLVHGLVDNRSVFARLERSLRRRGFTTVTSVDIPLFATSVQAAAAQLAETVEQVAGRHGDT GVHIVAHSLGGLVARYYVQRLGGGDHVQTLVTLATPHNGTRLACLVPKAVSYRLVSQLRPGSPLLRELVEPAPGVRTRFI AVAGGLDTVVRPGEAALTHPDLVTENVVVEGAGHHGLPFSSGVAHMIARRLATDSAGGRQPSQTTTKVPHLCG >Mature_312_residues AFCNVVDPTCHGRQVVTKGTVIDTRLFTWIGGAQLDGVKGLVVEAACLATHAALYPAAALPRRRRDDDGLADRYRLAGLT PLQRGLLIGDPMAAGTPILLVHGLVDNRSVFARLERSLRRRGFTTVTSVDIPLFATSVQAAAAQLAETVEQVAGRHGDTG VHIVAHSLGGLVARYYVQRLGGGDHVQTLVTLATPHNGTRLACLVPKAVSYRLVSQLRPGSPLLRELVEPAPGVRTRFIA VAGGLDTVVRPGEAALTHPDLVTENVVVEGAGHHGLPFSSGVAHMIARRLATDSAGGRQPSQTTTKVPHLCG
Specific function: Unknown
COG id: COG1075
COG function: function code R; Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33036; Mature: 32904
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFCNVVDPTCHGRQVVTKGTVIDTRLFTWIGGAQLDGVKGLVVEAACLATHAALYPAAA CCCCCCCCCCCCCCEEEECCCEEHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH LPRRRRDDDGLADRYRLAGLTPLQRGLLIGDPMAAGTPILLVHGLVDNRSVFARLERSLR CCCCCCCCCCHHHHHHHCCCCHHHCCEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHHH RRGFTTVTSVDIPLFATSVQAAAAQLAETVEQVAGRHGDTGVHIVAHSLGGLVARYYVQR HCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH LGGGDHVQTLVTLATPHNGTRLACLVPKAVSYRLVSQLRPGSPLLRELVEPAPGVRTRFI CCCCHHHEEEEEEECCCCCCEEEEECCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCEEEE AVAGGLDTVVRPGEAALTHPDLVTENVVVEGAGHHGLPFSSGVAHMIARRLATDSAGGRQ EEECCHHHHCCCCCCCCCCCCHHCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCC PSQTTTKVPHLCG CCCCHHCCCCCCC >Mature Secondary Structure AFCNVVDPTCHGRQVVTKGTVIDTRLFTWIGGAQLDGVKGLVVEAACLATHAALYPAAA CCCCCCCCCCCCCEEEECCCEEHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH LPRRRRDDDGLADRYRLAGLTPLQRGLLIGDPMAAGTPILLVHGLVDNRSVFARLERSLR CCCCCCCCCCHHHHHHHCCCCHHHCCEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHHH RRGFTTVTSVDIPLFATSVQAAAAQLAETVEQVAGRHGDTGVHIVAHSLGGLVARYYVQR HCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH LGGGDHVQTLVTLATPHNGTRLACLVPKAVSYRLVSQLRPGSPLLRELVEPAPGVRTRFI CCCCHHHEEEEEEECCCCCCEEEEECCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCEEEE AVAGGLDTVVRPGEAALTHPDLVTENVVVEGAGHHGLPFSSGVAHMIARRLATDSAGGRQ EEECCHHHHCCCCCCCCCCCCHHCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCC PSQTTTKVPHLCG CCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA