Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is 158317719

Identifier: 158317719

GI number: 158317719

Start: 7283764

End: 7284393

Strand: Reverse

Name: 158317719

Synonym: Franean1_5977

Alternate gene names: NA

Gene position: 7284393-7283764 (Counterclockwise)

Preceding gene: 158317720

Following gene: 158317718

Centisome position: 81.1

GC content: 76.83

Gene sequence:

>630_bases
GTGGCGCCACCCGCTGGCCGGTTCGCCGGCCGCCCGGTCACGTACGGGCTTGCGGCTGGTGGCGCGCTGGTCCTCATCTC
CGGGTTCCGCCCCTGGTTCGCCCCGGCGGACGCTGCCTACGAGACGTCGTCCGCCGGCTGGGACGCCGGTCCGGCCGGGC
GCCTCGCGCTGGTCCTCGGCCTGTTGCTGACCGCCGGCGTTCTCCTTCCCCTGATCATCCGACGTGTCCCGGTGTTGTCT
CGTGTCGAGGATCGGATGCTCGGCTGGGCCCACCGCCGTCACCACGACGTACGCGGATGGGCCACGGCGCGACTCGCGCG
CGCGCCGCGCGGTTCCGATGGCGCCGGCGGATTCGGCGGCCTCGCGGCCCGGGTGGCGCTGCGGGTCGCCGACACGCCGC
CCGCCCGGCTGACCGCCGCCGTCGCCGTTGCCGTCGCCGGCGCGGCCGTGATGGCGATCCTGATCGGGTGGATGACGGCG
CCGGCCATGGCCGATCCCGTCCTGCCGGCCGGCGGCCATCCGGCGATGCCCGGTGTGGCCCGGGACGGGCTGTTCGCCGG
GCTCGCGGGCACAACGGTCGAACTCGTCGCCTGTGCGTGGGCGCTGCGCCGCGCGCGGGCCGAGGGGTAG

Upstream 100 bases:

>100_bases
GGCGGGTACGGCCAGCCGCCGCAGGGCGGTTACGGCCAGCCGCCGTCGGATCGCTAGATCCCCTCACCGGACGACGTCCG
GTGAGGGAGGGAGAGAGCCA

Downstream 100 bases:

>100_bases
CGCTCAGGTGGGGGCGGCGGCGGTCCGGGATCGTACCGACGCGGCCGGCCGGAGCGGTGCGACCGGCGTGTCCTGTTACC
GACCTGGGTCGTTCTCGTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 208

Protein sequence:

>209_residues
MAPPAGRFAGRPVTYGLAAGGALVLISGFRPWFAPADAAYETSSAGWDAGPAGRLALVLGLLLTAGVLLPLIIRRVPVLS
RVEDRMLGWAHRRHHDVRGWATARLARAPRGSDGAGGFGGLAARVALRVADTPPARLTAAVAVAVAGAAVMAILIGWMTA
PAMADPVLPAGGHPAMPGVARDGLFAGLAGTTVELVACAWALRRARAEG

Sequences:

>Translated_209_residues
MAPPAGRFAGRPVTYGLAAGGALVLISGFRPWFAPADAAYETSSAGWDAGPAGRLALVLGLLLTAGVLLPLIIRRVPVLS
RVEDRMLGWAHRRHHDVRGWATARLARAPRGSDGAGGFGGLAARVALRVADTPPARLTAAVAVAVAGAAVMAILIGWMTA
PAMADPVLPAGGHPAMPGVARDGLFAGLAGTTVELVACAWALRRARAEG
>Mature_208_residues
APPAGRFAGRPVTYGLAAGGALVLISGFRPWFAPADAAYETSSAGWDAGPAGRLALVLGLLLTAGVLLPLIIRRVPVLSR
VEDRMLGWAHRRHHDVRGWATARLARAPRGSDGAGGFGGLAARVALRVADTPPARLTAAVAVAVAGAAVMAILIGWMTAP
AMADPVLPAGGHPAMPGVARDGLFAGLAGTTVELVACAWALRRARAEG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21257; Mature: 21126

Theoretical pI: Translated: 12.00; Mature: 12.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPPAGRFAGRPVTYGLAAGGALVLISGFRPWFAPADAAYETSSAGWDAGPAGRLALVLG
CCCCCCCCCCCCEEEHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
LLLTAGVLLPLIIRRVPVLSRVEDRMLGWAHRRHHDVRGWATARLARAPRGSDGAGGFGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
LAARVALRVADTPPARLTAAVAVAVAGAAVMAILIGWMTAPAMADPVLPAGGHPAMPGVA
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCH
RDGLFAGLAGTTVELVACAWALRRARAEG
HCCHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
APPAGRFAGRPVTYGLAAGGALVLISGFRPWFAPADAAYETSSAGWDAGPAGRLALVLG
CCCCCCCCCCCEEEHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
LLLTAGVLLPLIIRRVPVLSRVEDRMLGWAHRRHHDVRGWATARLARAPRGSDGAGGFGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
LAARVALRVADTPPARLTAAVAVAVAGAAVMAILIGWMTAPAMADPVLPAGGHPAMPGVA
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCH
RDGLFAGLAGTTVELVACAWALRRARAEG
HCCHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA