| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317719
Identifier: 158317719
GI number: 158317719
Start: 7283764
End: 7284393
Strand: Reverse
Name: 158317719
Synonym: Franean1_5977
Alternate gene names: NA
Gene position: 7284393-7283764 (Counterclockwise)
Preceding gene: 158317720
Following gene: 158317718
Centisome position: 81.1
GC content: 76.83
Gene sequence:
>630_bases GTGGCGCCACCCGCTGGCCGGTTCGCCGGCCGCCCGGTCACGTACGGGCTTGCGGCTGGTGGCGCGCTGGTCCTCATCTC CGGGTTCCGCCCCTGGTTCGCCCCGGCGGACGCTGCCTACGAGACGTCGTCCGCCGGCTGGGACGCCGGTCCGGCCGGGC GCCTCGCGCTGGTCCTCGGCCTGTTGCTGACCGCCGGCGTTCTCCTTCCCCTGATCATCCGACGTGTCCCGGTGTTGTCT CGTGTCGAGGATCGGATGCTCGGCTGGGCCCACCGCCGTCACCACGACGTACGCGGATGGGCCACGGCGCGACTCGCGCG CGCGCCGCGCGGTTCCGATGGCGCCGGCGGATTCGGCGGCCTCGCGGCCCGGGTGGCGCTGCGGGTCGCCGACACGCCGC CCGCCCGGCTGACCGCCGCCGTCGCCGTTGCCGTCGCCGGCGCGGCCGTGATGGCGATCCTGATCGGGTGGATGACGGCG CCGGCCATGGCCGATCCCGTCCTGCCGGCCGGCGGCCATCCGGCGATGCCCGGTGTGGCCCGGGACGGGCTGTTCGCCGG GCTCGCGGGCACAACGGTCGAACTCGTCGCCTGTGCGTGGGCGCTGCGCCGCGCGCGGGCCGAGGGGTAG
Upstream 100 bases:
>100_bases GGCGGGTACGGCCAGCCGCCGCAGGGCGGTTACGGCCAGCCGCCGTCGGATCGCTAGATCCCCTCACCGGACGACGTCCG GTGAGGGAGGGAGAGAGCCA
Downstream 100 bases:
>100_bases CGCTCAGGTGGGGGCGGCGGCGGTCCGGGATCGTACCGACGCGGCCGGCCGGAGCGGTGCGACCGGCGTGTCCTGTTACC GACCTGGGTCGTTCTCGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 209; Mature: 208
Protein sequence:
>209_residues MAPPAGRFAGRPVTYGLAAGGALVLISGFRPWFAPADAAYETSSAGWDAGPAGRLALVLGLLLTAGVLLPLIIRRVPVLS RVEDRMLGWAHRRHHDVRGWATARLARAPRGSDGAGGFGGLAARVALRVADTPPARLTAAVAVAVAGAAVMAILIGWMTA PAMADPVLPAGGHPAMPGVARDGLFAGLAGTTVELVACAWALRRARAEG
Sequences:
>Translated_209_residues MAPPAGRFAGRPVTYGLAAGGALVLISGFRPWFAPADAAYETSSAGWDAGPAGRLALVLGLLLTAGVLLPLIIRRVPVLS RVEDRMLGWAHRRHHDVRGWATARLARAPRGSDGAGGFGGLAARVALRVADTPPARLTAAVAVAVAGAAVMAILIGWMTA PAMADPVLPAGGHPAMPGVARDGLFAGLAGTTVELVACAWALRRARAEG >Mature_208_residues APPAGRFAGRPVTYGLAAGGALVLISGFRPWFAPADAAYETSSAGWDAGPAGRLALVLGLLLTAGVLLPLIIRRVPVLSR VEDRMLGWAHRRHHDVRGWATARLARAPRGSDGAGGFGGLAARVALRVADTPPARLTAAVAVAVAGAAVMAILIGWMTAP AMADPVLPAGGHPAMPGVARDGLFAGLAGTTVELVACAWALRRARAEG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21257; Mature: 21126
Theoretical pI: Translated: 12.00; Mature: 12.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPPAGRFAGRPVTYGLAAGGALVLISGFRPWFAPADAAYETSSAGWDAGPAGRLALVLG CCCCCCCCCCCCEEEHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH LLLTAGVLLPLIIRRVPVLSRVEDRMLGWAHRRHHDVRGWATARLARAPRGSDGAGGFGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH LAARVALRVADTPPARLTAAVAVAVAGAAVMAILIGWMTAPAMADPVLPAGGHPAMPGVA HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCH RDGLFAGLAGTTVELVACAWALRRARAEG HCCHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure APPAGRFAGRPVTYGLAAGGALVLISGFRPWFAPADAAYETSSAGWDAGPAGRLALVLG CCCCCCCCCCCEEEHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH LLLTAGVLLPLIIRRVPVLSRVEDRMLGWAHRRHHDVRGWATARLARAPRGSDGAGGFGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH LAARVALRVADTPPARLTAAVAVAVAGAAVMAILIGWMTAPAMADPVLPAGGHPAMPGVA HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCH RDGLFAGLAGTTVELVACAWALRRARAEG HCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA