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The map label for this gene is yhfQ [H]

Identifier: 158317681

GI number: 158317681

Start: 7215934

End: 7216926

Strand: Reverse

Name: yhfQ [H]

Synonym: Franean1_5939

Alternate gene names: 158317681

Gene position: 7216926-7215934 (Counterclockwise)

Preceding gene: 158317682

Following gene: 158317677

Centisome position: 80.35

GC content: 66.97

Gene sequence:

>993_bases
GTGCGGGGTATAAGAAAATCGCTCGCGGCGATATGCGTCGCGGCGGCCGTCATGGTCGGAATCGTGGCTTGCGGCAGCGA
TGACGACGGGGGCGCGTCCCAGGAGGGGGGGACCGCGGCGGCGGCCGGGTTCCCGGTCACGATCAAGCATGCGTTCGGAT
CGACGACCATTCCCGCGGAGCCGAAGAAAATCATCGCGCTGAGCTACGAGGAGGACACGCTCGCGGCGCTCGGAATCACG
CCGATCGCCTACGGTCAGAACCCCGGCAAGCCGGACGGGGACTTCCCCTGGCTCGAGGGCAGGATCGACCTCGCGGACAG
CACGGCGCTCGACACCAGCGGCGACCTCAACCTCGAGCAGATCGCCGCACTCGATCCCGACCTGATCCTCGCGACGAACT
TCTACGGGCTGGCGGACTACTACGACCGCCTCAGCGAGATCGCGCCGACCGTCGCCTACGAGACCGACGCCGGTATCTCG
ACCTGGCAGGACGTGAGCACGGTGATCGGGAAGGCGGTTGGTCGTGAGGCCGACGTCGCGAAGGCGATCGAAGCCACCGA
GAAGATCGTCTCCGACGCGGCCGCGGAGCTGCCCGGGCTGGCGGGCAAGACGTTCAGCTACAGCTACTACTACGAGTCCA
ACGGGCTCGCCGTGATCGACGACCCGGAGACGATCTCCATCCAGCTCTACGGCCAGCTCGGGATGAAGCTGTCGCCGCGG
GTCACCGCGAGCGTCGTCGACCGCGCGCTGAGCATGGAGAAGATCGGTGAGCTCGACGCCGACTTCATGATGATCGGCTT
CGCGACCGACGAACTGCGCACCGAGATGAAGGCCAACGAGCTGTACACGAGGATCCCGGCGGTCATGGACGGCCGGGCGC
AGGAGGTCGACGCCTTCACGGCGGGTGCGGTCAACAACCCGACCATCCTGAACATCCCCTGGCAGCTCGAGCAGCTCAAG
CCCACCCTGGCCAAGGTCGCGGCGGCGGGCTGA

Upstream 100 bases:

>100_bases
CCGCATCGAATTTGCCGCAACGAATTTTTGGTTAATCCGACCAAAATCCAGTCAGGTAGCGATTTCGCTGCATAACTAGT
TACGGAAGGTTGATGTTGCG

Downstream 100 bases:

>100_bases
CCAGTCGGGATCACGTCCGGGCGAGCCGGGTGACGCGCGGCGTGCGCGCGTCACCCGACTCGTCGCCGATCGTCGTCGCC
GCCAGCGTCAGCAGTGGTGC

Product: periplasmic binding protein

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 330; Mature: 330

Protein sequence:

>330_residues
MRGIRKSLAAICVAAAVMVGIVACGSDDDGGASQEGGTAAAAGFPVTIKHAFGSTTIPAEPKKIIALSYEEDTLAALGIT
PIAYGQNPGKPDGDFPWLEGRIDLADSTALDTSGDLNLEQIAALDPDLILATNFYGLADYYDRLSEIAPTVAYETDAGIS
TWQDVSTVIGKAVGREADVAKAIEATEKIVSDAAAELPGLAGKTFSYSYYYESNGLAVIDDPETISIQLYGQLGMKLSPR
VTASVVDRALSMEKIGELDADFMMIGFATDELRTEMKANELYTRIPAVMDGRAQEVDAFTAGAVNNPTILNIPWQLEQLK
PTLAKVAAAG

Sequences:

>Translated_330_residues
MRGIRKSLAAICVAAAVMVGIVACGSDDDGGASQEGGTAAAAGFPVTIKHAFGSTTIPAEPKKIIALSYEEDTLAALGIT
PIAYGQNPGKPDGDFPWLEGRIDLADSTALDTSGDLNLEQIAALDPDLILATNFYGLADYYDRLSEIAPTVAYETDAGIS
TWQDVSTVIGKAVGREADVAKAIEATEKIVSDAAAELPGLAGKTFSYSYYYESNGLAVIDDPETISIQLYGQLGMKLSPR
VTASVVDRALSMEKIGELDADFMMIGFATDELRTEMKANELYTRIPAVMDGRAQEVDAFTAGAVNNPTILNIPWQLEQLK
PTLAKVAAAG
>Mature_330_residues
MRGIRKSLAAICVAAAVMVGIVACGSDDDGGASQEGGTAAAAGFPVTIKHAFGSTTIPAEPKKIIALSYEEDTLAALGIT
PIAYGQNPGKPDGDFPWLEGRIDLADSTALDTSGDLNLEQIAALDPDLILATNFYGLADYYDRLSEIAPTVAYETDAGIS
TWQDVSTVIGKAVGREADVAKAIEATEKIVSDAAAELPGLAGKTFSYSYYYESNGLAVIDDPETISIQLYGQLGMKLSPR
VTASVVDRALSMEKIGELDADFMMIGFATDELRTEMKANELYTRIPAVMDGRAQEVDAFTAGAVNNPTILNIPWQLEQLK
PTLAKVAAAG

Specific function: Binds Citrate-Dependent Iron(III); Part Of The Binding- Protein-Dependent Transport System For Uptake Of Citrate-Dependent Iron(III). [C]

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 34768; Mature: 34768

Theoretical pI: Translated: 4.06; Mature: 4.06

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGIRKSLAAICVAAAVMVGIVACGSDDDGGASQEGGTAAAAGFPVTIKHAFGSTTIPAE
CCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCEEECCCCEEEEECCCCCCCCCC
PKKIIALSYEEDTLAALGITPIAYGQNPGKPDGDFPWLEGRIDLADSTALDTSGDLNLEQ
CCEEEEEEECCCCEEEECCCEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHH
IAALDPDLILATNFYGLADYYDRLSEIAPTVAYETDAGISTWQDVSTVIGKAVGREADVA
HHHCCCCEEEEECCCHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHCCHHHHH
KAIEATEKIVSDAAAELPGLAGKTFSYSYYYESNGLAVIDDPETISIQLYGQLGMKLSPR
HHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCEEEEECCCEEEEEEEEECCCEECCC
VTASVVDRALSMEKIGELDADFMMIGFATDELRTEMKANELYTRIPAVMDGRAQEVDAFT
HHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHEE
AGAVNNPTILNIPWQLEQLKPTLAKVAAAG
CCCCCCCEEEECCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRGIRKSLAAICVAAAVMVGIVACGSDDDGGASQEGGTAAAAGFPVTIKHAFGSTTIPAE
CCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCEEECCCCEEEEECCCCCCCCCC
PKKIIALSYEEDTLAALGITPIAYGQNPGKPDGDFPWLEGRIDLADSTALDTSGDLNLEQ
CCEEEEEEECCCCEEEECCCEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHH
IAALDPDLILATNFYGLADYYDRLSEIAPTVAYETDAGISTWQDVSTVIGKAVGREADVA
HHHCCCCEEEEECCCHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHCCHHHHH
KAIEATEKIVSDAAAELPGLAGKTFSYSYYYESNGLAVIDDPETISIQLYGQLGMKLSPR
HHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCEEEEECCCEEEEEEEEECCCEECCC
VTASVVDRALSMEKIGELDADFMMIGFATDELRTEMKANELYTRIPAVMDGRAQEVDAFT
HHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHEE
AGAVNNPTILNIPWQLEQLKPTLAKVAAAG
CCCCCCCEEEECCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]