| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317636
Identifier: 158317636
GI number: 158317636
Start: 7156132
End: 7157691
Strand: Direct
Name: 158317636
Synonym: Franean1_5893
Alternate gene names: NA
Gene position: 7156132-7157691 (Clockwise)
Preceding gene: 158317635
Following gene: 158317637
Centisome position: 79.67
GC content: 73.85
Gene sequence:
>1560_bases ATGACCACGCCCGGGCTGCGGGCGGCGGTCTACAACCGCTTCTGGCACTCGATGGGCGGCGGCGAGCGCCACAACGGCAT GATCGCGCAGGTGCTGGCCGCGGACGGGCTCGACGTCGACCTGATCGGGCATTCCGACGTCGACCTCGACGCGCTCGGCA GCCACCTGGGCCTGGATCTCTCCGGCTGCCGGTACCGGCGGCTGCCGGACCGTGGCGAGGACGCGATCGCCGCGCTGTCC GAGTCGTACCACCTGTTCGTGAACGGCTCGTACATGAGCCGGCTCGCCCCGCGCTCGCCGCGGTCGGCCTACCTGTGCTT CTTCCCGACGCCGTTCGACCACGACATGGCCGCCTGGCGCAAGGCCGCGGTGCGCACCGCCGGCCCGCTGCTGCGCGGGG TGAGCCCGGCCGTCAGCTTCGGGCAGGGCTGGTACCCGCCCGAGGGCGGCCGGCGCCGGCAGTGGACGTGGACGAACGGC GAGGGCATCCTGGCCGTCAACCCGGGCGGCGGGCGTACCCTGCGCGCGGACATCGGGCGTCCCGGGGCGAGCGGTGGCGT GCGGCTGCGGGTCGTCGACGCGGACGGCACCGTCCTCGCCAAGCTCCAGATCGAGCAGGCGTTCGCGCCGTTCGAGGTCA CCCTGCCGTCGTCGACCGCCGGGACGGAGCTCACCTTCGTCAGCGACGTCTTCTCCCCCGGGCCGGCGGACGTCCGCGAG CTCGGTGTGGCCGTCAGCCGGCCGCGGGTCACCGACGCCGACGAGGGGCCGCTGGAGCGGATGGCGCTGCGTTTCCCCTG GCTGCTGCGCGACCCGGCCGACCTCGGCTACCTCGAGGGCTACGACACCGTGATGGCCAACTCCGAGTACACCCGGGGCT GGATCCGGCGGATGTGGCGGCGGGACTCCGACGTGCTGTTCCCGCCGATCCAGGTCGACCGGCTCACCCCGGCGCCGGAG CGCGAGAAGGCCGTCATCACCGTCGGCCGGTTCTTCGCCCCCGGCCTCGGCCATGCCAAGCGGCAGCTCGAGATGGTGCA GTGGTTCGCCGAGCTGTACCGCTCCGGTGCGCTGCCCGACTGGCGGATGTACGTCGTCGGCGGATGCGAGGACTCGCAGA AGCCGTACGTCGAGCAGGTCCGCGCCGCCGGGGCGGGGGTGCCCGTCGAGGTCCTGCCGAACGCCCCGCGCACCGAGGTG GAGCGGCTGCTGTCGACCAGCTCGGTCTTCTGGTCCGCGACCGGCTACGGCGAGGACGACCGCAAACGCCCCTGGACGGC GGAGCACTTCGGGATGACAACCGTCGAGGCGATGGCCGGCGGCTGCGTGCCCGTGGTCATCGACCGTGCCGGGCAGCGCG AGATCGTCCGGCACGGGGTGGACGGCTACCGCTGGACCGGCCCGGAGCAGGTCGCCTCGTTCACCCGCCGGCTCGCCGCC GAGGACGGGCTGCGCTCCCGGCTGGCCGCCGCCTCCGTGCAGCGGGCCCAGCAGTTCTCCGACGCCGCGTTCGCCGAGCG GTGGCACGGCATCGCCGAGCAGCGCCGGCTCTACTCCTGA
Upstream 100 bases:
>100_bases CCTACCTGCGGCTGCTGCCGGCGATGCTGCGCCGCCGCCGGGAGATCGGCGCGACCGCCACCGAACGCCGGGTCAGCCTG CAGAGCTGGCTGGTGGAGCG
Downstream 100 bases:
>100_bases CCGTGGACCCCCTCCTGAGCACGAACTCACTCCTGAGCACGGACTCCTGACCACGGTGCCGAAACTGCGCGTCGTCCTCG ACGGAACCCCGCTGCTCGGG
Product: group 1 glycosyl transferase
Products: NA
Alternate protein names: Glycosyltransferase; Glycosyl Transferase
Number of amino acids: Translated: 519; Mature: 518
Protein sequence:
>519_residues MTTPGLRAAVYNRFWHSMGGGERHNGMIAQVLAADGLDVDLIGHSDVDLDALGSHLGLDLSGCRYRRLPDRGEDAIAALS ESYHLFVNGSYMSRLAPRSPRSAYLCFFPTPFDHDMAAWRKAAVRTAGPLLRGVSPAVSFGQGWYPPEGGRRRQWTWTNG EGILAVNPGGGRTLRADIGRPGASGGVRLRVVDADGTVLAKLQIEQAFAPFEVTLPSSTAGTELTFVSDVFSPGPADVRE LGVAVSRPRVTDADEGPLERMALRFPWLLRDPADLGYLEGYDTVMANSEYTRGWIRRMWRRDSDVLFPPIQVDRLTPAPE REKAVITVGRFFAPGLGHAKRQLEMVQWFAELYRSGALPDWRMYVVGGCEDSQKPYVEQVRAAGAGVPVEVLPNAPRTEV ERLLSTSSVFWSATGYGEDDRKRPWTAEHFGMTTVEAMAGGCVPVVIDRAGQREIVRHGVDGYRWTGPEQVASFTRRLAA EDGLRSRLAAASVQRAQQFSDAAFAERWHGIAEQRRLYS
Sequences:
>Translated_519_residues MTTPGLRAAVYNRFWHSMGGGERHNGMIAQVLAADGLDVDLIGHSDVDLDALGSHLGLDLSGCRYRRLPDRGEDAIAALS ESYHLFVNGSYMSRLAPRSPRSAYLCFFPTPFDHDMAAWRKAAVRTAGPLLRGVSPAVSFGQGWYPPEGGRRRQWTWTNG EGILAVNPGGGRTLRADIGRPGASGGVRLRVVDADGTVLAKLQIEQAFAPFEVTLPSSTAGTELTFVSDVFSPGPADVRE LGVAVSRPRVTDADEGPLERMALRFPWLLRDPADLGYLEGYDTVMANSEYTRGWIRRMWRRDSDVLFPPIQVDRLTPAPE REKAVITVGRFFAPGLGHAKRQLEMVQWFAELYRSGALPDWRMYVVGGCEDSQKPYVEQVRAAGAGVPVEVLPNAPRTEV ERLLSTSSVFWSATGYGEDDRKRPWTAEHFGMTTVEAMAGGCVPVVIDRAGQREIVRHGVDGYRWTGPEQVASFTRRLAA EDGLRSRLAAASVQRAQQFSDAAFAERWHGIAEQRRLYS >Mature_518_residues TTPGLRAAVYNRFWHSMGGGERHNGMIAQVLAADGLDVDLIGHSDVDLDALGSHLGLDLSGCRYRRLPDRGEDAIAALSE SYHLFVNGSYMSRLAPRSPRSAYLCFFPTPFDHDMAAWRKAAVRTAGPLLRGVSPAVSFGQGWYPPEGGRRRQWTWTNGE GILAVNPGGGRTLRADIGRPGASGGVRLRVVDADGTVLAKLQIEQAFAPFEVTLPSSTAGTELTFVSDVFSPGPADVREL GVAVSRPRVTDADEGPLERMALRFPWLLRDPADLGYLEGYDTVMANSEYTRGWIRRMWRRDSDVLFPPIQVDRLTPAPER EKAVITVGRFFAPGLGHAKRQLEMVQWFAELYRSGALPDWRMYVVGGCEDSQKPYVEQVRAAGAGVPVEVLPNAPRTEVE RLLSTSSVFWSATGYGEDDRKRPWTAEHFGMTTVEAMAGGCVPVVIDRAGQREIVRHGVDGYRWTGPEQVASFTRRLAAE DGLRSRLAAASVQRAQQFSDAAFAERWHGIAEQRRLYS
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57190; Mature: 57059
Theoretical pI: Translated: 7.33; Mature: 7.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPGLRAAVYNRFWHSMGGGERHNGMIAQVLAADGLDVDLIGHSDVDLDALGSHLGLDL CCCCHHHHHHHHHHHHHCCCCCCCCCHHEEHHHCCCCCEEEECCCCCCHHHHHHHHCCCC SGCRYRRLPDRGEDAIAALSESYHLFVNGSYMSRLAPRSPRSAYLCFFPTPFDHDMAAWR CCCEECCCCCCCHHHHHHHCCCEEEEEECHHHHHCCCCCCCCEEEEEECCCCCCHHHHHH KAAVRTAGPLLRGVSPAVSFGQGWYPPEGGRRRQWTWTNGEGILAVNPGGGRTLRADIGR HHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCEEEECCCEEEEECCCCCCEEEECCCC PGASGGVRLRVVDADGTVLAKLQIEQAFAPFEVTLPSSTAGTELTFVSDVFSPGPADVRE CCCCCCEEEEEEECCCCEEEEEEEECCCCCEEEECCCCCCCCEEEEHHHHCCCCCHHHHH LGVAVSRPRVTDADEGPLERMALRFPWLLRDPADLGYLEGYDTVMANSEYTRGWIRRMWR HCHHHCCCCCCCCCCCHHHHHHHHCCHHCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHH RDSDVLFPPIQVDRLTPAPEREKAVITVGRFFAPGLGHAKRQLEMVQWFAELYRSGALPD CCCCCCCCCCEECCCCCCCCCCCEEEEEHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCC WRMYVVGGCEDSQKPYVEQVRAAGAGVPVEVLPNAPRTEVERLLSTSSVFWSATGYGEDD EEEEEEECCCCCCCHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHCHHEEEECCCCCCC RKRPWTAEHFGMTTVEAMAGGCVPVVIDRAGQREIVRHGVDGYRWTGPEQVASFTRRLAA CCCCCCHHHCCCHHHHHHHCCCEEEEECCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHH EDGLRSRLAAASVQRAQQFSDAAFAERWHGIAEQRRLYS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TTPGLRAAVYNRFWHSMGGGERHNGMIAQVLAADGLDVDLIGHSDVDLDALGSHLGLDL CCCHHHHHHHHHHHHHCCCCCCCCCHHEEHHHCCCCCEEEECCCCCCHHHHHHHHCCCC SGCRYRRLPDRGEDAIAALSESYHLFVNGSYMSRLAPRSPRSAYLCFFPTPFDHDMAAWR CCCEECCCCCCCHHHHHHHCCCEEEEEECHHHHHCCCCCCCCEEEEEECCCCCCHHHHHH KAAVRTAGPLLRGVSPAVSFGQGWYPPEGGRRRQWTWTNGEGILAVNPGGGRTLRADIGR HHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCEEEECCCEEEEECCCCCCEEEECCCC PGASGGVRLRVVDADGTVLAKLQIEQAFAPFEVTLPSSTAGTELTFVSDVFSPGPADVRE CCCCCCEEEEEEECCCCEEEEEEEECCCCCEEEECCCCCCCCEEEEHHHHCCCCCHHHHH LGVAVSRPRVTDADEGPLERMALRFPWLLRDPADLGYLEGYDTVMANSEYTRGWIRRMWR HCHHHCCCCCCCCCCCHHHHHHHHCCHHCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHH RDSDVLFPPIQVDRLTPAPEREKAVITVGRFFAPGLGHAKRQLEMVQWFAELYRSGALPD CCCCCCCCCCEECCCCCCCCCCCEEEEEHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCC WRMYVVGGCEDSQKPYVEQVRAAGAGVPVEVLPNAPRTEVERLLSTSSVFWSATGYGEDD EEEEEEECCCCCCCHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHCHHEEEECCCCCCC RKRPWTAEHFGMTTVEAMAGGCVPVVIDRAGQREIVRHGVDGYRWTGPEQVASFTRRLAA CCCCCCHHHCCCHHHHHHHCCCEEEEECCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHH EDGLRSRLAAASVQRAQQFSDAAFAERWHGIAEQRRLYS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA