| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317635
Identifier: 158317635
GI number: 158317635
Start: 7154705
End: 7156135
Strand: Direct
Name: 158317635
Synonym: Franean1_5892
Alternate gene names: NA
Gene position: 7154705-7156135 (Clockwise)
Preceding gene: 158317634
Following gene: 158317636
Centisome position: 79.66
GC content: 72.12
Gene sequence:
>1431_bases ATGACGGACCGGGCGACGAGCAACGGAGCGATGACCACCATGGCCATGAACGTGGCCATGACGGGCCAGGCGGCACCCGA GCCGCTCGCCACGATCGTCATCGTGAACTGGAACGGTGCCCACCTGCTCCCGCCCTGCCTGGACGCCGTCGCCAAGCAGG ACGCGCCGTTCACCTTCGAGACGCACGTGGTCGACAACGCCTCGGCCGACGACTCGCGCGAGGTGCTGGCACAGCGCTAC CCGTGGGCGAAGCTCGTCCCCTCGGACCGCAACCTCGGCTTCGCCGGCGGCAACAACCTCGCCCTGCGAGGTGTCACGAC CCCGTACGCGGTACTGCTGAACAACGACGCGATCCCCGAGCCGGACTGGCTGGCCCGGCTGCTGGCCCCGTTCGCCGAGC CGGGCGGCAACCGGCTCGGCGCCGTCACCGGCAAGGTCGTGTTCCTCCCCCGCTTCCTGCGGCTGACCCTGTCGACGCCC ACCTTCTCGCCGGGGCCGCACGACCCGCGCGAGCTGGGCGTCCGGGTGAGCTCGGTGACGGTGAACGGCCGCGAGGCGCT GCGCGAGGTGCTGTGGGAGAAGCTCACTTTCGGCGCCGAGGGCCCGGCGGACGCGCCGTTCTTCTGGACCCGCGGCGAGG GTGAGCTGTGTGTGCCGGTGCCCGAGGGCGGCCCGGTCACCATCGGCCTCACCTGGGCCGCGGACACCGCCAAGCAGGTC ACGCTGGGCTGGGCCGGCGCCGGTGACACCACCGCGACGCGCACGCTGCCGGTGGGCACCGAGCCGTCCGCCGTGTCGTT CACCGTGGACGAGGGCGCCCCGCGCGTCGACGTGATCAACAACGTCGGCGGGATCGTGCTCACCGACGGCTACGGCGCCG ACCGCGGCTACCAGCAGATCGACACCGGCCAGTTCGACAACCCCGAGGAGGTCTTCACCGCCTGCGGCAACGGCATGGCG ATGCGGACCGAGCTCGGCCAGGCGCTCGGCTGGTTCGACGACGACTTCTTCCTCTACTACGAGGACACCGACCTCTCCTG GCGCATCCGGGCCCGCGGGTACCAGATCCGCTACGTCCCGGGCGCGGTGCTGCGGCACGTCCACTCGGCGTCGAGCGTCG AGTGGTCCCCCCTGTTCGTGTTCCACACCGACCGCAACCGGCTGCTGATGCTGACCAAGGACGCGACCGTGCGCACGGCC GTCTCGGCGGTCACGCGCTACCCGCTGACCACCGCGTCGATCGCCGTGCGGACCTGGCGACAGGCACTGCGCTCGCGCAG CCGCCCGGCGGTGCGGCCCACCGTGCTGCGGGTTCGGGTCTTCGCCTCCTACCTGCGGCTGCTGCCGGCGATGCTGCGCC GCCGCCGGGAGATCGGCGCGACCGCCACCGAACGCCGGGTCAGCCTGCAGAGCTGGCTGGTGGAGCGATGA
Upstream 100 bases:
>100_bases GCCAGCCGGTGACGGTACGGCGCTTCGAGGAGCTGTTCGGGGTCAGCGGCCCGCAGGTCGCCGGGCTGCTCAAGGTCGAC TACGAGGCGAGGCTGCGCCG
Downstream 100 bases:
>100_bases CCACGCCCGGGCTGCGGGCGGCGGTCTACAACCGCTTCTGGCACTCGATGGGCGGCGGCGAGCGCCACAACGGCATGATC GCGCAGGTGCTGGCCGCGGA
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: Glycosyltransferase; Glycosyl Transferase; Glycosyl Transferase Group 2 Family Protein; Family 2 Glycosyl Transferase; Glycosyl Transferase Group 2 Family; Glycosyl Transferase Family 2 Protein; B-Glycosyltransferase; Glycosyltransferase Domain-Containing Protein; Rhamnosyl Transferase Related Protein; Family 2 Glycosyltransferase; Capsule-Related Glycosyltransferase; Group 2 Family Glycosyltransferase
Number of amino acids: Translated: 476; Mature: 475
Protein sequence:
>476_residues MTDRATSNGAMTTMAMNVAMTGQAAPEPLATIVIVNWNGAHLLPPCLDAVAKQDAPFTFETHVVDNASADDSREVLAQRY PWAKLVPSDRNLGFAGGNNLALRGVTTPYAVLLNNDAIPEPDWLARLLAPFAEPGGNRLGAVTGKVVFLPRFLRLTLSTP TFSPGPHDPRELGVRVSSVTVNGREALREVLWEKLTFGAEGPADAPFFWTRGEGELCVPVPEGGPVTIGLTWAADTAKQV TLGWAGAGDTTATRTLPVGTEPSAVSFTVDEGAPRVDVINNVGGIVLTDGYGADRGYQQIDTGQFDNPEEVFTACGNGMA MRTELGQALGWFDDDFFLYYEDTDLSWRIRARGYQIRYVPGAVLRHVHSASSVEWSPLFVFHTDRNRLLMLTKDATVRTA VSAVTRYPLTTASIAVRTWRQALRSRSRPAVRPTVLRVRVFASYLRLLPAMLRRRREIGATATERRVSLQSWLVER
Sequences:
>Translated_476_residues MTDRATSNGAMTTMAMNVAMTGQAAPEPLATIVIVNWNGAHLLPPCLDAVAKQDAPFTFETHVVDNASADDSREVLAQRY PWAKLVPSDRNLGFAGGNNLALRGVTTPYAVLLNNDAIPEPDWLARLLAPFAEPGGNRLGAVTGKVVFLPRFLRLTLSTP TFSPGPHDPRELGVRVSSVTVNGREALREVLWEKLTFGAEGPADAPFFWTRGEGELCVPVPEGGPVTIGLTWAADTAKQV TLGWAGAGDTTATRTLPVGTEPSAVSFTVDEGAPRVDVINNVGGIVLTDGYGADRGYQQIDTGQFDNPEEVFTACGNGMA MRTELGQALGWFDDDFFLYYEDTDLSWRIRARGYQIRYVPGAVLRHVHSASSVEWSPLFVFHTDRNRLLMLTKDATVRTA VSAVTRYPLTTASIAVRTWRQALRSRSRPAVRPTVLRVRVFASYLRLLPAMLRRRREIGATATERRVSLQSWLVER >Mature_475_residues TDRATSNGAMTTMAMNVAMTGQAAPEPLATIVIVNWNGAHLLPPCLDAVAKQDAPFTFETHVVDNASADDSREVLAQRYP WAKLVPSDRNLGFAGGNNLALRGVTTPYAVLLNNDAIPEPDWLARLLAPFAEPGGNRLGAVTGKVVFLPRFLRLTLSTPT FSPGPHDPRELGVRVSSVTVNGREALREVLWEKLTFGAEGPADAPFFWTRGEGELCVPVPEGGPVTIGLTWAADTAKQVT LGWAGAGDTTATRTLPVGTEPSAVSFTVDEGAPRVDVINNVGGIVLTDGYGADRGYQQIDTGQFDNPEEVFTACGNGMAM RTELGQALGWFDDDFFLYYEDTDLSWRIRARGYQIRYVPGAVLRHVHSASSVEWSPLFVFHTDRNRLLMLTKDATVRTAV SAVTRYPLTTASIAVRTWRQALRSRSRPAVRPTVLRVRVFASYLRLLPAMLRRRREIGATATERRVSLQSWLVER
Specific function: Unknown
COG id: COG1216
COG function: function code R; Predicted glycosyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52065; Mature: 51933
Theoretical pI: Translated: 7.60; Mature: 7.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDRATSNGAMTTMAMNVAMTGQAAPEPLATIVIVNWNGAHLLPPCLDAVAKQDAPFTFE CCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCEECCHHHHHHHCCCCCEEEE THVVDNASADDSREVLAQRYPWAKLVPSDRNLGFAGGNNLALRGVTTPYAVLLNNDAIPE EEEECCCCCCCHHHHHHHHCCCCEECCCCCCCEEECCCCEEEEECCCCEEEEECCCCCCC PDWLARLLAPFAEPGGNRLGAVTGKVVFLPRFLRLTLSTPTFSPGPHDPRELGVRVSSVT HHHHHHHHHHHCCCCCCEEEEECCEEEEEEEEEEEEECCCCCCCCCCCHHHHCEEEEEEE VNGREALREVLWEKLTFGAEGPADAPFFWTRGEGELCVPVPEGGPVTIGLTWAADTAKQV ECHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCEEEECCCCCEEEEEEEECCCCCCEE TLGWAGAGDTTATRTLPVGTEPSAVSFTVDEGAPRVDVINNVGGIVLTDGYGADRGYQQI EEEECCCCCCCCEEEEECCCCCCEEEEEECCCCCCEEEECCCCCEEEECCCCCCCCCCCC DTGQFDNPEEVFTACGNGMAMRTELGQALGWFDDDFFLYYEDTDLSWRIRARGYQIRYVP CCCCCCCHHHHHHHCCCCEEEHHHHHHHHCCCCCCEEEEEECCCCEEEEEECCEEEEECC GAVLRHVHSASSVEWSPLFVFHTDRNRLLMLTKDATVRTAVSAVTRYPLTTASIAVRTWR HHHHHHHHCCCCCCCCEEEEEECCCCEEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHH QALRSRSRPAVRPTVLRVRVFASYLRLLPAMLRRRREIGATATERRVSLQSWLVER HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC >Mature Secondary Structure TDRATSNGAMTTMAMNVAMTGQAAPEPLATIVIVNWNGAHLLPPCLDAVAKQDAPFTFE CCCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCEECCHHHHHHHCCCCCEEEE THVVDNASADDSREVLAQRYPWAKLVPSDRNLGFAGGNNLALRGVTTPYAVLLNNDAIPE EEEECCCCCCCHHHHHHHHCCCCEECCCCCCCEEECCCCEEEEECCCCEEEEECCCCCCC PDWLARLLAPFAEPGGNRLGAVTGKVVFLPRFLRLTLSTPTFSPGPHDPRELGVRVSSVT HHHHHHHHHHHCCCCCCEEEEECCEEEEEEEEEEEEECCCCCCCCCCCHHHHCEEEEEEE VNGREALREVLWEKLTFGAEGPADAPFFWTRGEGELCVPVPEGGPVTIGLTWAADTAKQV ECHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCEEEECCCCCEEEEEEEECCCCCCEE TLGWAGAGDTTATRTLPVGTEPSAVSFTVDEGAPRVDVINNVGGIVLTDGYGADRGYQQI EEEECCCCCCCCEEEEECCCCCCEEEEEECCCCCCEEEECCCCCEEEECCCCCCCCCCCC DTGQFDNPEEVFTACGNGMAMRTELGQALGWFDDDFFLYYEDTDLSWRIRARGYQIRYVP CCCCCCCHHHHHHHCCCCEEEHHHHHHHHCCCCCCEEEEEECCCCEEEEEECCEEEEECC GAVLRHVHSASSVEWSPLFVFHTDRNRLLMLTKDATVRTAVSAVTRYPLTTASIAVRTWR HHHHHHHHCCCCCCCCEEEEEECCCCEEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHH QALRSRSRPAVRPTVLRVRVFASYLRLLPAMLRRRREIGATATERRVSLQSWLVER HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA