| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is mpg1 [H]
Identifier: 158317620
GI number: 158317620
Start: 7133234
End: 7134307
Strand: Reverse
Name: mpg1 [H]
Synonym: Franean1_5876
Alternate gene names: 158317620
Gene position: 7134307-7133234 (Counterclockwise)
Preceding gene: 158317621
Following gene: 158317615
Centisome position: 79.43
GC content: 73.37
Gene sequence:
>1074_bases ATGGACGCAGTGATGCTGGTCGGCGGGCAGGGAACCCGTCTTCGCCCGTTGACGATGTCGGCGCCGAAGCCGATGTTGCC GGTCGCCGGCGTGCCGGTGACGGCCCACATGCTCGCCCGTGCCCGCGACGCGGGAATCACCCGGGTGGTCCTCGCCACCT CGTACCGGGCCGAGGTCTTCGAGGAGCACTTCGGTGACGGTTCCGGGCACGGTCTCGAACTCGAATACGTCACCGAGACC GAGCCGCTGGGTACCGGCGGCGCCATCCGCAACGTCGCCAGCCGGCTGCGCTCCGGCGCCGACGAGCCGGTGGTCATCTT CAACGGCGACATCCTCTCCGGCCTCGACATCGGCGCCCTCGTCGAGCGGCACACCACCGCCGACGCGGCCGTCACCCTCC ACCTCACCAGGGTCGACGACCCGCGGGCCTTCGGTGTCGTCCCGACCGACCCCGCCGGCCGGGTCACCGCCTTCCTCGAG AAGACCCCCGATCCCCCCACCAACCTCATCAACGCCGGCTGCTACGTCTTCCGCCGCTCGCTCATCGACACCATCCCCGC GGGACGTCCGGTCTCGGTCGAGCGGGAGACCTTCCCGTCCCTGCTCGCCGCCGGGGTGCCGGTGGTCGGCTACCCGGACG ACACCTACTGGCTCGACCTCGGGACCCCGGCGGCGTTCGTCCTGGGCTCGCGGGACCTCGTCACCGGGCGGATGCCGTCC TCGGCGCTGCCCGGCCCGGTCGGGGACCGCCTCGTGCTGCCCGGGTCCACGGTGGCCACCGACGCCAAGATCGGCGGCGG CTCGACGATCGGGGCGGGTGCCTCGGTCGGCACCGGCGCGCGCATCGATGGCTCGGTGCTGTTCGACCGGGCGTCCGTCG GGGCGGGCGCGTACGTGCGTGACAGCGTCGTCGGCCGCGAGGCGGTGATCGGCAACGGGGTGGTGCTCGAGAACGTCGTC ATCGGCGACGGCGCCGTGATCGAGCCGGGCAACGAGCTGCGCGCCGGGGCCAGGGTGTTCCCGGGCGCGGTGCTCGGCGC CGGCGCCGTCCGGTTCAGCTCCGACCGGGCCTGA
Upstream 100 bases:
>100_bases CGACGATGCGTGTCCAGCCTGTGGCCTCTCGTTGAGCATGGGGGTCACCCGGCCGGGCACACGCAACCGACTCGGACGTG CTCTGCGACACTGACGCCCC
Downstream 100 bases:
>100_bases CCTCCCGGCCGACCGGGCGGCTTCAGCTCCGACCGAGCCTGACCTCCCGGCCGGCCGACCAGGCGACCTCCACGCACACC TGACCGTCGTCGGCGTCCGC
Product: nucleotidyl transferase
Products: NA
Alternate protein names: ATP-mannose-1-phosphate guanylyltransferase; GDP-mannose pyrophosphorylase; NDP-hexose pyrophosphorylase [H]
Number of amino acids: Translated: 357; Mature: 357
Protein sequence:
>357_residues MDAVMLVGGQGTRLRPLTMSAPKPMLPVAGVPVTAHMLARARDAGITRVVLATSYRAEVFEEHFGDGSGHGLELEYVTET EPLGTGGAIRNVASRLRSGADEPVVIFNGDILSGLDIGALVERHTTADAAVTLHLTRVDDPRAFGVVPTDPAGRVTAFLE KTPDPPTNLINAGCYVFRRSLIDTIPAGRPVSVERETFPSLLAAGVPVVGYPDDTYWLDLGTPAAFVLGSRDLVTGRMPS SALPGPVGDRLVLPGSTVATDAKIGGGSTIGAGASVGTGARIDGSVLFDRASVGAGAYVRDSVVGREAVIGNGVVLENVV IGDGAVIEPGNELRAGARVFPGAVLGAGAVRFSSDRA
Sequences:
>Translated_357_residues MDAVMLVGGQGTRLRPLTMSAPKPMLPVAGVPVTAHMLARARDAGITRVVLATSYRAEVFEEHFGDGSGHGLELEYVTET EPLGTGGAIRNVASRLRSGADEPVVIFNGDILSGLDIGALVERHTTADAAVTLHLTRVDDPRAFGVVPTDPAGRVTAFLE KTPDPPTNLINAGCYVFRRSLIDTIPAGRPVSVERETFPSLLAAGVPVVGYPDDTYWLDLGTPAAFVLGSRDLVTGRMPS SALPGPVGDRLVLPGSTVATDAKIGGGSTIGAGASVGTGARIDGSVLFDRASVGAGAYVRDSVVGREAVIGNGVVLENVV IGDGAVIEPGNELRAGARVFPGAVLGAGAVRFSSDRA >Mature_357_residues MDAVMLVGGQGTRLRPLTMSAPKPMLPVAGVPVTAHMLARARDAGITRVVLATSYRAEVFEEHFGDGSGHGLELEYVTET EPLGTGGAIRNVASRLRSGADEPVVIFNGDILSGLDIGALVERHTTADAAVTLHLTRVDDPRAFGVVPTDPAGRVTAFLE KTPDPPTNLINAGCYVFRRSLIDTIPAGRPVSVERETFPSLLAAGVPVVGYPDDTYWLDLGTPAAFVLGSRDLVTGRMPS SALPGPVGDRLVLPGSTVATDAKIGGGSTIGAGASVGTGARIDGSVLFDRASVGAGAYVRDSVVGREAVIGNGVVLENVV IGDGAVIEPGNELRAGARVFPGAVLGAGAVRFSSDRA
Specific function: Catalyzes The Formation Of Dtdp-Glucose, From Dttp And Glucose 1-Phosphate, As Well As Its Pyrophosphorolysis. [C]
COG id: COG1208
COG function: function code MJ; Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transferase hexapeptide repeat family [H]
Homologues:
Organism=Homo sapiens, GI11761621, Length=355, Percent_Identity=30.7042253521127, Blast_Score=167, Evalue=2e-41, Organism=Homo sapiens, GI11761619, Length=323, Percent_Identity=30.3405572755418, Blast_Score=157, Evalue=1e-38, Organism=Homo sapiens, GI31881779, Length=354, Percent_Identity=26.5536723163842, Blast_Score=114, Evalue=2e-25, Organism=Homo sapiens, GI45447090, Length=354, Percent_Identity=26.5536723163842, Blast_Score=114, Evalue=2e-25, Organism=Escherichia coli, GI1788351, Length=242, Percent_Identity=26.8595041322314, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI1789837, Length=372, Percent_Identity=25.8064516129032, Blast_Score=83, Evalue=3e-17, Organism=Escherichia coli, GI1790224, Length=193, Percent_Identity=30.0518134715026, Blast_Score=77, Evalue=2e-15, Organism=Caenorhabditis elegans, GI133931050, Length=359, Percent_Identity=34.8189415041783, Blast_Score=187, Evalue=5e-48, Organism=Caenorhabditis elegans, GI17509979, Length=336, Percent_Identity=27.6785714285714, Blast_Score=122, Evalue=4e-28, Organism=Caenorhabditis elegans, GI17509981, Length=325, Percent_Identity=26.4615384615385, Blast_Score=113, Evalue=1e-25, Organism=Saccharomyces cerevisiae, GI6320148, Length=351, Percent_Identity=32.1937321937322, Blast_Score=178, Evalue=1e-45, Organism=Drosophila melanogaster, GI21355443, Length=359, Percent_Identity=34.5403899721448, Blast_Score=189, Evalue=3e-48, Organism=Drosophila melanogaster, GI24644084, Length=359, Percent_Identity=34.5403899721448, Blast_Score=189, Evalue=3e-48, Organism=Drosophila melanogaster, GI24653912, Length=369, Percent_Identity=25.2032520325203, Blast_Score=101, Evalue=6e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005835 [H]
Pfam domain/function: PF00483 NTP_transferase [H]
EC number: =2.7.7.13 [H]
Molecular weight: Translated: 36651; Mature: 36651
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAVMLVGGQGTRLRPLTMSAPKPMLPVAGVPVTAHMLARARDAGITRVVLATSYRAEVF CCEEEEECCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCHHHHHH EEHFGDGSGHGLELEYVTETEPLGTGGAIRNVASRLRSGADEPVVIFNGDILSGLDIGAL HHHCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCEECCCCHHHH VERHTTADAAVTLHLTRVDDPRAFGVVPTDPAGRVTAFLEKTPDPPTNLINAGCYVFRRS HHHCCCCCEEEEEEEEECCCCCEEEECCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHH LIDTIPAGRPVSVERETFPSLLAAGVPVVGYPDDTYWLDLGTPAAFVLGSRDLVTGRMPS HHHHCCCCCCCEECHHHHHHHHHCCCCEEECCCCCEEEECCCCEEEEECCCCEEECCCCC SALPGPVGDRLVLPGSTVATDAKIGGGSTIGAGASVGTGARIDGSVLFDRASVGAGAYVR CCCCCCCCCEEEECCCCEECCCCCCCCCCCCCCCCCCCCCEECCEEEEEECCCCCCCCHH DSVVGREAVIGNGVVLENVVIGDGAVIEPGNELRAGARVFPGAVLGAGAVRFSSDRA HHHCCCHHEECCCEEEEEEEECCCCEECCCHHHCCCCEECCCHHCCCCEEEECCCCC >Mature Secondary Structure MDAVMLVGGQGTRLRPLTMSAPKPMLPVAGVPVTAHMLARARDAGITRVVLATSYRAEVF CCEEEEECCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCHHHHHH EEHFGDGSGHGLELEYVTETEPLGTGGAIRNVASRLRSGADEPVVIFNGDILSGLDIGAL HHHCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCEECCCCHHHH VERHTTADAAVTLHLTRVDDPRAFGVVPTDPAGRVTAFLEKTPDPPTNLINAGCYVFRRS HHHCCCCCEEEEEEEEECCCCCEEEECCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHH LIDTIPAGRPVSVERETFPSLLAAGVPVVGYPDDTYWLDLGTPAAFVLGSRDLVTGRMPS HHHHCCCCCCCEECHHHHHHHHHCCCCEEECCCCCEEEECCCCEEEEECCCCEEECCCCC SALPGPVGDRLVLPGSTVATDAKIGGGSTIGAGASVGTGARIDGSVLFDRASVGAGAYVR CCCCCCCCCEEEECCCCEECCCCCCCCCCCCCCCCCCCCCEECCEEEEEECCCCCCCCHH DSVVGREAVIGNGVVLENVVIGDGAVIEPGNELRAGARVFPGAVLGAGAVRFSSDRA HHHCCCHHEECCCEEEEEEEECCCCEECCCHHHCCCCEECCCHHCCCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8334170 [H]