| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is acrR [C]
Identifier: 158317611
GI number: 158317611
Start: 7120498
End: 7121079
Strand: Direct
Name: acrR [C]
Synonym: Franean1_5867
Alternate gene names: 158317611
Gene position: 7120498-7121079 (Clockwise)
Preceding gene: 158317605
Following gene: 158317612
Centisome position: 79.27
GC content: 73.54
Gene sequence:
>582_bases GTGCCACGCAACCGCCAGGAGGTCCCGCGCGAGGAACGGATCGACGCGCTGCTCGCGGTCGCCGAGCAGCAGTTCCTCGC CCGCGGGTTCGCCGGTACCTCCATCGCCGAGATCGCCCGCGCCGCCGGCATCGAGCCCGGCTCGGTGTACTGGTACTTCC GGTCCAAGGACCACGCGTTCGCCGCCGTCCTGAACCGCCTGCTCGACGGCGAGGTGGACCGCATCGCGGAGCTGCCCGGC GAGGCGGCACAGAAGCTCTTCGCCGCGCTGGACTCGGTCGAGCGACGCCGCACGCTGCACCCCTGCGTCGCCGAGCGCGC CCCGCACGCCCCGCCGATCATGGAGTACCACGAGCGGCTGCACGAGTGGCTCCACGGCCTGGCGCTGAGCGCCGTGGCCG ACCTGGTCCCCCAGCCCGACCACGAGATCGCCGCCGACGCCGTGGTCGCCACGATCGAGGGTGGCCTGGCCAACCCGGCG CCGAGCCGGCCCACCAGCCATCTCGTCCGCTACCTGCTGGCGTCACTCGCCGCGGTCGAGCACTCCCCGAACGCTCCGGC CACCGAGGTCACCACCAGCTGA
Upstream 100 bases:
>100_bases CCCTCCCCGCGACGCGGGAGCCGCATGACGGAGCGGGCGGGACGACGCGGGTACCGGACAATCCCCTCCTGCCCCCCGCC AGGGTCGTTACGCTGATCAG
Downstream 100 bases:
>100_bases ACCACGACATCCGAGGGCGGGGCCGGGGGCCCCGGCCGCCGAGTCGGTGCCCGCGAGGCCCGGGGTCGCCGGGCGGGGTG CCGGGGTGTCGGGGCGGTGC
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator TetR Family Protein; Transcriptional Regulator; Regulatory Protein TetR; Transcriptional Regulator TetR
Number of amino acids: Translated: 193; Mature: 192
Protein sequence:
>193_residues MPRNRQEVPREERIDALLAVAEQQFLARGFAGTSIAEIARAAGIEPGSVYWYFRSKDHAFAAVLNRLLDGEVDRIAELPG EAAQKLFAALDSVERRRTLHPCVAERAPHAPPIMEYHERLHEWLHGLALSAVADLVPQPDHEIAADAVVATIEGGLANPA PSRPTSHLVRYLLASLAAVEHSPNAPATEVTTS
Sequences:
>Translated_193_residues MPRNRQEVPREERIDALLAVAEQQFLARGFAGTSIAEIARAAGIEPGSVYWYFRSKDHAFAAVLNRLLDGEVDRIAELPG EAAQKLFAALDSVERRRTLHPCVAERAPHAPPIMEYHERLHEWLHGLALSAVADLVPQPDHEIAADAVVATIEGGLANPA PSRPTSHLVRYLLASLAAVEHSPNAPATEVTTS >Mature_192_residues PRNRQEVPREERIDALLAVAEQQFLARGFAGTSIAEIARAAGIEPGSVYWYFRSKDHAFAAVLNRLLDGEVDRIAELPGE AAQKLFAALDSVERRRTLHPCVAERAPHAPPIMEYHERLHEWLHGLALSAVADLVPQPDHEIAADAVVATIEGGLANPAP SRPTSHLVRYLLASLAAVEHSPNAPATEVTTS
Specific function: Potential Regulator Protein For The Acrab Genes. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20998; Mature: 20867
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRNRQEVPREERIDALLAVAEQQFLARGFAGTSIAEIARAAGIEPGSVYWYFRSKDHAF CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEEEECCCHHH AAVLNRLLDGEVDRIAELPGEAAQKLFAALDSVERRRTLHPCVAERAPHAPPIMEYHERL HHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH HEWLHGLALSAVADLVPQPDHEIAADAVVATIEGGLANPAPSRPTSHLVRYLLASLAAVE HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH HSPNAPATEVTTS CCCCCCCCCCCCC >Mature Secondary Structure PRNRQEVPREERIDALLAVAEQQFLARGFAGTSIAEIARAAGIEPGSVYWYFRSKDHAF CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEEEECCCHHH AAVLNRLLDGEVDRIAELPGEAAQKLFAALDSVERRRTLHPCVAERAPHAPPIMEYHERL HHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH HEWLHGLALSAVADLVPQPDHEIAADAVVATIEGGLANPAPSRPTSHLVRYLLASLAAVE HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH HSPNAPATEVTTS CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA