| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317600
Identifier: 158317600
GI number: 158317600
Start: 7105644
End: 7106816
Strand: Reverse
Name: 158317600
Synonym: Franean1_5856
Alternate gene names: NA
Gene position: 7106816-7105644 (Counterclockwise)
Preceding gene: 158317601
Following gene: 158317595
Centisome position: 79.12
GC content: 76.3
Gene sequence:
>1173_bases GTGAACGTCGACGAGCCCATCCTGGACGACGCGCGCAGGCTCGAGGCCGCGGACACGCTCAACCTGCTCCCGAACACGGC CTCGGCGGCGCGCCAGGTCCGGGAGAGCTGGCGCCTGGCGCAGGAGGCCGGTGTCGGGTCGCTCGCGGCCGACGGCCGGC CCCGCGCGGTCGTGGTCGTCGGGGTGGGCGCCTCGGCGCTCGCCGGGGACGTGCTCGACGCCGTCGCCGGGCAGGCCGCA CCGGTGCCGGTGATCGCGCACCATCGGCACGGGCTGCCCGGTTGGGCCGGAGTGGCTGACGTGGTCCTCGCCGTGTCCGT GTCCGGTACCTCCGCGGAAACCCTCTCGGCCGTCGAGGAGGCGCACCGGCGGGGCTGCCGGCTGGCCGTCGTCGGCCCCG CGGACTCTCCGTTGTCCCACCTCGCGGAGCTGGCCAGGGCGCCGTTCGTGGCGCTGCCCGACGCCCGGCCGGCGCACACC GGCCTGTGGTCGCTGGCCGTCCCGGTGCTCGCCGCCGCGGCGGCGCTCGGGGTGCACCGCGAGGGCGAGGCCGCGATCGA GGCCGCCGCGGTGCGCCTGGAGGCGATGGCCACCAGGTGCCGGCCGACGAGCGAGTCGTTCGTCAACCCGGCGAAGACGC TGGCCCTCGAGCTGGCCGGCGCTCTGCCGCTGTGGTGGGGCACGACCCGGCTGAGTGAGGTCGCCGCGATCCGGGCCGCC GGTGTGCTTGCGGCGAACGCGGGCTACCCCGCGCTGGTCGGAGCGCTGCCGCATCCGGCCGAGGACCAGGTTGCGCTGTT CCGCGGTGCCTTCGGTTCCGGCAGCGGCGGGGCCGCCTCGGACGGTGGCGAAGGCACCGGCGCCGACGACGAGTTCGCCG ACTTCTTCCGCGACCGGGTCGACGACGAGGCTGTCGTACGGCTTCGGCTGATCCTGCTGCGTGATCCCGCCGGCGAGCAT CCCGAGGTCGCCCGTGCGGCGGAGCGGGCCGTCATGCTGGCGGGTGAGCACGGCGTCGGCGTCACCGAGCTGCGGGCGGA GGGCATGGCGCCGCTGGAGCGCCTGGCCTCCCTGATCGGCCTGATCGACTTCGCGGGCAGCTACGTCGGACTCGTACTCG GGGTCGACCCCGGCGCCGCGCTGCGGCTGCGGGAGATCGGCACCGCCCGCTGA
Upstream 100 bases:
>100_bases TTCCCGGTTCGCGACGACATCCCGGTGATGCTGCTCGACGAGGCGAAGCCATTCCCGGCCGCGGCCGGATCCTCGTCCTG ACTGGCGCCGCGCGGCCCGC
Downstream 100 bases:
>100_bases ACCGCTGAACCGCCGGCGGTGAGTTGGCCCGGCCGGCCGGGTCGGGCGACGCGGCCGGCCGGCGTGCCCCGCCGGGCCGG TGGGAGCTCCCTGGTCAGGG
Product: RpiR family transcriptional regulator
Products: NA
Alternate protein names: Glucose-6-phosphate isomerase; GPI; Mannose-6-phosphate isomerase; Phosphoglucose isomerase; PGI; Phosphomannose isomerase; PMI [H]
Number of amino acids: Translated: 390; Mature: 390
Protein sequence:
>390_residues MNVDEPILDDARRLEAADTLNLLPNTASAARQVRESWRLAQEAGVGSLAADGRPRAVVVVGVGASALAGDVLDAVAGQAA PVPVIAHHRHGLPGWAGVADVVLAVSVSGTSAETLSAVEEAHRRGCRLAVVGPADSPLSHLAELARAPFVALPDARPAHT GLWSLAVPVLAAAAALGVHREGEAAIEAAAVRLEAMATRCRPTSESFVNPAKTLALELAGALPLWWGTTRLSEVAAIRAA GVLAANAGYPALVGALPHPAEDQVALFRGAFGSGSGGAASDGGEGTGADDEFADFFRDRVDDEAVVRLRLILLRDPAGEH PEVARAAERAVMLAGEHGVGVTELRAEGMAPLERLASLIGLIDFAGSYVGLVLGVDPGAALRLREIGTAR
Sequences:
>Translated_390_residues MNVDEPILDDARRLEAADTLNLLPNTASAARQVRESWRLAQEAGVGSLAADGRPRAVVVVGVGASALAGDVLDAVAGQAA PVPVIAHHRHGLPGWAGVADVVLAVSVSGTSAETLSAVEEAHRRGCRLAVVGPADSPLSHLAELARAPFVALPDARPAHT GLWSLAVPVLAAAAALGVHREGEAAIEAAAVRLEAMATRCRPTSESFVNPAKTLALELAGALPLWWGTTRLSEVAAIRAA GVLAANAGYPALVGALPHPAEDQVALFRGAFGSGSGGAASDGGEGTGADDEFADFFRDRVDDEAVVRLRLILLRDPAGEH PEVARAAERAVMLAGEHGVGVTELRAEGMAPLERLASLIGLIDFAGSYVGLVLGVDPGAALRLREIGTAR >Mature_390_residues MNVDEPILDDARRLEAADTLNLLPNTASAARQVRESWRLAQEAGVGSLAADGRPRAVVVVGVGASALAGDVLDAVAGQAA PVPVIAHHRHGLPGWAGVADVVLAVSVSGTSAETLSAVEEAHRRGCRLAVVGPADSPLSHLAELARAPFVALPDARPAHT GLWSLAVPVLAAAAALGVHREGEAAIEAAAVRLEAMATRCRPTSESFVNPAKTLALELAGALPLWWGTTRLSEVAAIRAA GVLAANAGYPALVGALPHPAEDQVALFRGAFGSGSGGAASDGGEGTGADDEFADFFRDRVDDEAVVRLRLILLRDPAGEH PEVARAAERAVMLAGEHGVGVTELRAEGMAPLERLASLIGLIDFAGSYVGLVLGVDPGAALRLREIGTAR
Specific function: Catalyzes the isomerization of both glucose 6-phosphate and epimeric mannose 6-phosphate at a similar catalytic efficiency [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 SIS domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011857 - InterPro: IPR019490 - InterPro: IPR001347 [H]
Pfam domain/function: PF10432 bact-PGI_C; PF01380 SIS [H]
EC number: =5.3.1.9; =5.3.1.8 [H]
Molecular weight: Translated: 39875; Mature: 39875
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVDEPILDDARRLEAADTLNLLPNTASAARQVRESWRLAQEAGVGSLAADGRPRAVVVV CCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEE GVGASALAGDVLDAVAGQAAPVPVIAHHRHGLPGWAGVADVVLAVSVSGTSAETLSAVEE ECCHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCHHHHHHHHHEEECCCCCHHHHHHHHH AHRRGCRLAVVGPADSPLSHLAELARAPFVALPDARPAHTGLWSLAVPVLAAAAALGVHR HHHCCCEEEEECCCCCHHHHHHHHHHCCEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCC EGEAAIEAAAVRLEAMATRCRPTSESFVNPAKTLALELAGALPLWWGTTRLSEVAAIRAA CCHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH GVLAANAGYPALVGALPHPAEDQVALFRGAFGSGSGGAASDGGEGTGADDEFADFFRDRV HHEEECCCCCHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHC DDEAVVRLRLILLRDPAGEHPEVARAAERAVMLAGEHGVGVTELRAEGMAPLERLASLIG CHHHHHHHHHHEEECCCCCCHHHHHHHHHHEEEECCCCCCHHHHHHCCCHHHHHHHHHHH LIDFAGSYVGLVLGVDPGAALRLREIGTAR HHHHHCCCEEEEEECCCCCEEEEHHCCCCC >Mature Secondary Structure MNVDEPILDDARRLEAADTLNLLPNTASAARQVRESWRLAQEAGVGSLAADGRPRAVVVV CCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEE GVGASALAGDVLDAVAGQAAPVPVIAHHRHGLPGWAGVADVVLAVSVSGTSAETLSAVEE ECCHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCHHHHHHHHHEEECCCCCHHHHHHHHH AHRRGCRLAVVGPADSPLSHLAELARAPFVALPDARPAHTGLWSLAVPVLAAAAALGVHR HHHCCCEEEEECCCCCHHHHHHHHHHCCEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCC EGEAAIEAAAVRLEAMATRCRPTSESFVNPAKTLALELAGALPLWWGTTRLSEVAAIRAA CCHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH GVLAANAGYPALVGALPHPAEDQVALFRGAFGSGSGGAASDGGEGTGADDEFADFFRDRV HHEEECCCCCHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHC DDEAVVRLRLILLRDPAGEHPEVARAAERAVMLAGEHGVGVTELRAEGMAPLERLASLIG CHHHHHHHHHHEEECCCCCCHHHHHHHHHHEEEECCCCCCHHHHHHCCCHHHHHHHHHHH LIDFAGSYVGLVLGVDPGAALRLREIGTAR HHHHHCCCEEEEEECCCCCEEEEHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA