| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317595
Identifier: 158317595
GI number: 158317595
Start: 7098608
End: 7099012
Strand: Reverse
Name: 158317595
Synonym: Franean1_5851
Alternate gene names: NA
Gene position: 7099012-7098608 (Counterclockwise)
Preceding gene: 158317600
Following gene: 158317594
Centisome position: 79.04
GC content: 69.14
Gene sequence:
>405_bases GTGGGCGCGGGTGGCGTCTACGACCTCGGGTATCGCATCGTGTGGTGCCCGAAGTACCGCCGCCCCGTGTTCGCTGGTTC TGTCCGTGACCGCTGTGAGGAGCTGGTCCGGCGGAAGTGCACCGAGCACGAGTGGATGGTCGTCGCGTGGGAGGTCACGC CCGACCACGTGCGGCTGTTCGTCAAGGCTCATCCGAAGCACTTCCCGTCGTGTGTCGCCAACCCGCTCAAGGGGTTGACG TCCCGGGTGCTGCGCGTGGAGTTCGGGCATCTGCGTTCCCGGTTGCCGGCCCTGTGGTCGCGGTCGTACTTCGCCGGCGC CGTCGGCGCGGTTTCGCCCGAGACCGTCCGCCGGTACGTTGACACCCGGTACGGGCGGCTGTGGCGTGTGGAGCGTGCCC GGTGA
Upstream 100 bases:
>100_bases CGAGGGGGCTGGCGCCTTCAGGCGTCAGGGGAATCGGGCGCGGACCGTAATCATGGATGTACGTCGCTGGTATTCTCGGA TCATGGTTCGGGGGGTGACG
Downstream 100 bases:
>100_bases GGCGGGCTTTCAGGTTCCTGCTCCGCCCGAGCGTGAAGCAGGCCGCCGCGCTGACGGCGATGCTCGATGATCACCGGGCA CTTTACAACGCCGCGTTGCA
Product: transposase IS200-family protein
Products: NA
Alternate protein names: Transposase IS; Transposase-Related Protein; Transposase OrfA For Insertion Sequence Element; Transposase And Inactivated Derivatives; IS Element ISTsi3 OrfA-Like Probably Transposase; ISChy9 Transposase OrfA; ISSoc6 OrfA Transposase; Transposase-Family Protein; IS Element Transposase; Transposase Related Protein; ISCpe2 Transposase OrfA; IS Element ISDka2 OrfA
Number of amino acids: Translated: 134; Mature: 133
Protein sequence:
>134_residues MGAGGVYDLGYRIVWCPKYRRPVFAGSVRDRCEELVRRKCTEHEWMVVAWEVTPDHVRLFVKAHPKHFPSCVANPLKGLT SRVLRVEFGHLRSRLPALWSRSYFAGAVGAVSPETVRRYVDTRYGRLWRVERAR
Sequences:
>Translated_134_residues MGAGGVYDLGYRIVWCPKYRRPVFAGSVRDRCEELVRRKCTEHEWMVVAWEVTPDHVRLFVKAHPKHFPSCVANPLKGLT SRVLRVEFGHLRSRLPALWSRSYFAGAVGAVSPETVRRYVDTRYGRLWRVERAR >Mature_133_residues GAGGVYDLGYRIVWCPKYRRPVFAGSVRDRCEELVRRKCTEHEWMVVAWEVTPDHVRLFVKAHPKHFPSCVANPLKGLTS RVLRVEFGHLRSRLPALWSRSYFAGAVGAVSPETVRRYVDTRYGRLWRVERAR
Specific function: Unknown
COG id: COG1943
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15599; Mature: 15468
Theoretical pI: Translated: 10.82; Mature: 10.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGAGGVYDLGYRIVWCPKYRRPVFAGSVRDRCEELVRRKCTEHEWMVVAWEVTPDHVRLF CCCCCEEECCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECHHHEEEE VKAHPKHFPSCVANPLKGLTSRVLRVEFGHLRSRLPALWSRSYFAGAVGAVSPETVRRYV EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHH DTRYGRLWRVERAR HHHHHHEEEEECCC >Mature Secondary Structure GAGGVYDLGYRIVWCPKYRRPVFAGSVRDRCEELVRRKCTEHEWMVVAWEVTPDHVRLF CCCCEEECCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECHHHEEEE VKAHPKHFPSCVANPLKGLTSRVLRVEFGHLRSRLPALWSRSYFAGAVGAVSPETVRRYV EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHH DTRYGRLWRVERAR HHHHHHEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA