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The map label for this gene is degU [H]

Identifier: 158317551

GI number: 158317551

Start: 7051395

End: 7051769

Strand: Reverse

Name: degU [H]

Synonym: Franean1_5807

Alternate gene names: 158317551

Gene position: 7051769-7051395 (Counterclockwise)

Preceding gene: 158317554

Following gene: 158317549

Centisome position: 78.51

GC content: 71.47

Gene sequence:

>375_bases
GTGATCGTCGTCGACGACCAGGAACCGTTCCGGGTCACGGCGGCCTCCGTGGCCGAGGCCACCGAGGGGTTCGAGCTGGT
CGGGACCGTCGAGACCGCCGAGGAGTCGGTCGCCGCGGTCGCCGCGCTCGCACCCGACCTGGTGCCGATGGACGTCAACC
TGCCGGGCATGGACGGCCTCGCGGCGACCCGGCTGCTGCGGGTGTCCGGTGCGGTGAGTTCAGTGGTCCTGATGTCGTCG
TACGACGCCGACCGCTACGCCGACGTGGCGACCGAGTGCGGTGCCATCGGATACCTGACGAAGGTCGACCTCGACCCGGA
CGGCCTGCAGGCGGTCTGGGACCGAGGTCGACGACGGCCCGGGCCGTCGACATAG

Upstream 100 bases:

>100_bases
CGAGATGCCTTCCATGGTGTTCGTCGGCGGCATCCGGATGTCGGCTCGGCCGACGTTTTCCGTCCCGCAACGACCGGAAG
GGCGACGCATGGCCGTTCAT

Downstream 100 bases:

>100_bases
CTCTACCAGCCCAAATTTGAGAACCTCGACCGGCGGGTATGCGGTGGGTGCTCCCGGCGTCGTCATCGGCGCTCGTCGAC
GATGTAGGTGCGAATGGATG

Product: response regulator receiver protein

Products: NA

Alternate protein names: Protease production enhancer protein [H]

Number of amino acids: Translated: 124; Mature: 124

Protein sequence:

>124_residues
MIVVDDQEPFRVTAASVAEATEGFELVGTVETAEESVAAVAALAPDLVPMDVNLPGMDGLAATRLLRVSGAVSSVVLMSS
YDADRYADVATECGAIGYLTKVDLDPDGLQAVWDRGRRRPGPST

Sequences:

>Translated_124_residues
MIVVDDQEPFRVTAASVAEATEGFELVGTVETAEESVAAVAALAPDLVPMDVNLPGMDGLAATRLLRVSGAVSSVVLMSS
YDADRYADVATECGAIGYLTKVDLDPDGLQAVWDRGRRRPGPST
>Mature_124_residues
MIVVDDQEPFRVTAASVAEATEGFELVGTVETAEESVAAVAALAPDLVPMDVNLPGMDGLAATRLLRVSGAVSSVVLMSS
YDADRYADVATECGAIGYLTKVDLDPDGLQAVWDRGRRRPGPST

Specific function: Regulating factor for the production of extracellular proteases. The N-terminal region acts as an inhibitor, whereas the C-terminal region carries enhancing activity [H]

COG id: COG2197

COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 12970; Mature: 12970

Theoretical pI: Translated: 3.92; Mature: 3.92

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVVDDQEPFRVTAASVAEATEGFELVGTVETAEESVAAVAALAPDLVPMDVNLPGMDGL
CEEECCCCCCEEHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHCCCCEEECCCCCCCCCH
AATRLLRVSGAVSSVVLMSSYDADRYADVATECGAIGYLTKVDLDPDGLQAVWDRGRRRP
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHCCCCCC
GPST
CCCC
>Mature Secondary Structure
MIVVDDQEPFRVTAASVAEATEGFELVGTVETAEESVAAVAALAPDLVPMDVNLPGMDGL
CEEECCCCCCEEHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHCCCCEEECCCCCCCCCH
AATRLLRVSGAVSSVVLMSSYDADRYADVATECGAIGYLTKVDLDPDGLQAVWDRGRRRP
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHCCCCCC
GPST
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3136143; 3141378; 3141377; 9384377 [H]