| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317547
Identifier: 158317547
GI number: 158317547
Start: 7047380
End: 7048174
Strand: Reverse
Name: 158317547
Synonym: Franean1_5803
Alternate gene names: NA
Gene position: 7048174-7047380 (Counterclockwise)
Preceding gene: 158317548
Following gene: 158317546
Centisome position: 78.47
GC content: 67.55
Gene sequence:
>795_bases ATGCCGGCCGACAACGCTTACCCCGGCCCCGGCCCCGGCCCCGGTTCAGGCCCCGGCCCCGGCCCCAATTCCGGGTCCGG GTCCGGGTATACCTCCGCATCTGATCTGGCCTTCGAACAGATGCTGCGCGAACTGCTCGACCGGGCCACACGGTCCGTCG TGGCACCGGCCGACCTGACCGTCAGGGTGTGCGCACCGGCTCCGCCGCGTCATCAGCGAGGACGGCGCAAAGCACTCGTG CTCGTAGCGGCGGCGCTGGCCACGAGCTCGGTGATCATCGGCGGCCTGACCGTCGAAAGGCATCTCCCTTCCGACCATGG GCTGAACGTCATCACACCGGCGGCCGGAAGCCCGCTCCCCGGACCGGCCACCGGCGCGACCGCGCATCCGGGCGTTCCGC CGGCCGGGTTGGCGACAGTCCCGCCAGCTGACCCCGCGCCGCCGGACCAGGCCACCGCGGACGAGATCACGACGGCGTTC ACCGAGGCATTCGACGGGGACGACAACATCGACGACGGGTTGGCCTACGTCCAGAACGGCGAACGGTACCGCGACATCAC ACGGGGTTTCATTCAGCGTTATCCAGGTGTCATCGGCAACCTCAAGGTACAGCTTGAGAACATCACGCCGATCGCCGGCA ACCAGGCTCGAGCGACCATCATCCTCACCCACACCGACCCCCAACTCGGAAGGAAATGGGGGTACCAGATCAAGCGAGAG GTGGTAGCCATCCGCGTCGACGGCCATTGGTTGGTGAGTTCCGGAACGTACTCGTTCCTCGTCGGATCCGCCTGA
Upstream 100 bases:
>100_bases GCGTCGGCTCGGTGAAGACCCACGCGTCGCGGGCGCTGGCCCGGCTGCGTGGGAGCCAGCATCTGGGGGATGTCCGCGTC CGAATCGAGAGGAGGCGTTG
Downstream 100 bases:
>100_bases TCGGAAGCGTCCGTACACCAGGGCGCACCACCCGGAATGTGCGCCGGGAATATGTGATCCTGCCGGACATGATGAAGAGA ACAAGCGCGGGTACGGGTAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 264; Mature: 263
Protein sequence:
>264_residues MPADNAYPGPGPGPGSGPGPGPNSGSGSGYTSASDLAFEQMLRELLDRATRSVVAPADLTVRVCAPAPPRHQRGRRKALV LVAAALATSSVIIGGLTVERHLPSDHGLNVITPAAGSPLPGPATGATAHPGVPPAGLATVPPADPAPPDQATADEITTAF TEAFDGDDNIDDGLAYVQNGERYRDITRGFIQRYPGVIGNLKVQLENITPIAGNQARATIILTHTDPQLGRKWGYQIKRE VVAIRVDGHWLVSSGTYSFLVGSA
Sequences:
>Translated_264_residues MPADNAYPGPGPGPGSGPGPGPNSGSGSGYTSASDLAFEQMLRELLDRATRSVVAPADLTVRVCAPAPPRHQRGRRKALV LVAAALATSSVIIGGLTVERHLPSDHGLNVITPAAGSPLPGPATGATAHPGVPPAGLATVPPADPAPPDQATADEITTAF TEAFDGDDNIDDGLAYVQNGERYRDITRGFIQRYPGVIGNLKVQLENITPIAGNQARATIILTHTDPQLGRKWGYQIKRE VVAIRVDGHWLVSSGTYSFLVGSA >Mature_263_residues PADNAYPGPGPGPGSGPGPGPNSGSGSGYTSASDLAFEQMLRELLDRATRSVVAPADLTVRVCAPAPPRHQRGRRKALVL VAAALATSSVIIGGLTVERHLPSDHGLNVITPAAGSPLPGPATGATAHPGVPPAGLATVPPADPAPPDQATADEITTAFT EAFDGDDNIDDGLAYVQNGERYRDITRGFIQRYPGVIGNLKVQLENITPIAGNQARATIILTHTDPQLGRKWGYQIKREV VAIRVDGHWLVSSGTYSFLVGSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27357; Mature: 27226
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPADNAYPGPGPGPGSGPGPGPNSGSGSGYTSASDLAFEQMLRELLDRATRSVVAPADLT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCE VRVCAPAPPRHQRGRRKALVLVAAALATSSVIIGGLTVERHLPSDHGLNVITPAAGSPLP EEEECCCCCHHHHHHHHHHHHHHHHHHHCCEEEECEEEEECCCCCCCCEEECCCCCCCCC GPATGATAHPGVPPAGLATVPPADPAPPDQATADEITTAFTEAFDGDDNIDDGLAYVQNG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHCC ERYRDITRGFIQRYPGVIGNLKVQLENITPIAGNQARATIILTHTDPQLGRKWGYQIKRE HHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCEEEEEEEECCHHHHHHHCHHEEEE VVAIRVDGHWLVSSGTYSFLVGSA EEEEEECCEEEEECCCEEEEEECC >Mature Secondary Structure PADNAYPGPGPGPGSGPGPGPNSGSGSGYTSASDLAFEQMLRELLDRATRSVVAPADLT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCE VRVCAPAPPRHQRGRRKALVLVAAALATSSVIIGGLTVERHLPSDHGLNVITPAAGSPLP EEEECCCCCHHHHHHHHHHHHHHHHHHHCCEEEECEEEEECCCCCCCCEEECCCCCCCCC GPATGATAHPGVPPAGLATVPPADPAPPDQATADEITTAFTEAFDGDDNIDDGLAYVQNG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHCC ERYRDITRGFIQRYPGVIGNLKVQLENITPIAGNQARATIILTHTDPQLGRKWGYQIKRE HHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCEEEEEEEECCHHHHHHHCHHEEEE VVAIRVDGHWLVSSGTYSFLVGSA EEEEEECCEEEEECCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA