| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317544
Identifier: 158317544
GI number: 158317544
Start: 7044137
End: 7044586
Strand: Reverse
Name: 158317544
Synonym: Franean1_5800
Alternate gene names: NA
Gene position: 7044586-7044137 (Counterclockwise)
Preceding gene: 158317545
Following gene: 158317542
Centisome position: 78.43
GC content: 70.89
Gene sequence:
>450_bases ATGGCTGACGCGCGCGAACCGGTCGACCGCGACGGCGGGACGATCCTCATCCTGACGCTGGGCTATCTGATGCTGGCCGC GATGCTCGCCGTGGTTGTCACCGACGTGTCCGCGCTGTATCTGGCTCGTCGTTCCGTCGCGTCCGCCGCCGACGGCGCCG CCCTGGCCGCTGCGCAGCGGATCGACGAGAACGCGATCTACACCGCTACCGAGAATTTCGAGGCACTGCCGCTGTCGGAC ATCGTCGACGCCGTCGACGAGTACGAGGCGCAGGCGGACCCGTCCGGCCGGACCGCCCTGGATGCTTCTCTCGTCGACGC GACGACCGTCCGGGTGGAGGGCAGCCGGGTGGTCGAGCTGCCGGTGGTTGGTTTCCTCGGCGTCGGCCCGGTGACCGTGC GCGCGGGCGCGCAGGCCCAGTCGCTGGTCAGAACGCCCGCCGAGCCCTGA
Upstream 100 bases:
>100_bases CTCGTTTCCTGCGCGGCGGACGTCCTGGCGGTGGCCGGCGTCGGTACCGCGGCCGGCCCGGGAATCCGTCGACCGACGGA TGGCACCTGGGGAGCATGGG
Downstream 100 bases:
>100_bases GCCGCCGAGCCCTGAGCCGCCGAGCCCTGAGCCGCCGAGCCCGCGGCCCAGGCCGCGGCTCACATGTCCTTGCGGCCCGA CATCATCTCGGCGCGCGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 149; Mature: 148
Protein sequence:
>149_residues MADAREPVDRDGGTILILTLGYLMLAAMLAVVVTDVSALYLARRSVASAADGAALAAAQRIDENAIYTATENFEALPLSD IVDAVDEYEAQADPSGRTALDASLVDATTVRVEGSRVVELPVVGFLGVGPVTVRAGAQAQSLVRTPAEP
Sequences:
>Translated_149_residues MADAREPVDRDGGTILILTLGYLMLAAMLAVVVTDVSALYLARRSVASAADGAALAAAQRIDENAIYTATENFEALPLSD IVDAVDEYEAQADPSGRTALDASLVDATTVRVEGSRVVELPVVGFLGVGPVTVRAGAQAQSLVRTPAEP >Mature_148_residues ADAREPVDRDGGTILILTLGYLMLAAMLAVVVTDVSALYLARRSVASAADGAALAAAQRIDENAIYTATENFEALPLSDI VDAVDEYEAQADPSGRTALDASLVDATTVRVEGSRVVELPVVGFLGVGPVTVRAGAQAQSLVRTPAEP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15413; Mature: 15281
Theoretical pI: Translated: 3.97; Mature: 3.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADAREPVDRDGGTILILTLGYLMLAAMLAVVVTDVSALYLARRSVASAADGAALAAAQR CCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH IDENAIYTATENFEALPLSDIVDAVDEYEAQADPSGRTALDASLVDATTVRVEGSRVVEL CCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHCEEEEEECCCEEEEE PVVGFLGVGPVTVRAGAQAQSLVRTPAEP CCEEEECCCCEEEECCCHHHHHHCCCCCC >Mature Secondary Structure ADAREPVDRDGGTILILTLGYLMLAAMLAVVVTDVSALYLARRSVASAADGAALAAAQR CCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH IDENAIYTATENFEALPLSDIVDAVDEYEAQADPSGRTALDASLVDATTVRVEGSRVVEL CCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHCEEEEEECCCEEEEE PVVGFLGVGPVTVRAGAQAQSLVRTPAEP CCEEEECCCCEEEECCCHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA