| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317505
Identifier: 158317505
GI number: 158317505
Start: 6995226
End: 6996248
Strand: Reverse
Name: 158317505
Synonym: Franean1_5757
Alternate gene names: NA
Gene position: 6996248-6995226 (Counterclockwise)
Preceding gene: 158317506
Following gene: 158317504
Centisome position: 77.89
GC content: 72.14
Gene sequence:
>1023_bases ATGACGACGACCGCGACGACGGCGGCTGCTTCGGACGCGGCCGCCACCGGGGCACCCGAGGCCGCCTGGCACTCGGCGCC AGGCCTGCTCGACGGCGCGAAGACGCTGCGGCTCGGTCCCGAGCAGTGCGGCATCGCCTACTGGATCGACGAGGTGGCGC AGGGCACCTTGCGGGACCGAGGCGCGAGGGGGCACCGAGCCGACGCGGCCGTGCCGCCGTTCCTCCGGCGGCCGGGACCG TTGCACGAGGCGCTGGTGCTCGAATTCACGCTGCGTAGCCTCGCTGAGCAGGCGGCGACCCGGTTGCTGGCGCACTACGT GGCGAGCGCGCCGGGCGTGCGGGAGCTGGAGTTCTACGTCACCCAGTTGGTCGACGAGGCTCGGCACTGCCAGGTCTTCC GGGACCACGTGGCAGAACTGGGGCCGCCGAGCGCCGCGCTGGCCCGCGAACTCGACCGGACGGCCGCCGACTACGCCCGC CTGGTCCTCGAACCCGTCGTCGCGTTCACCCTCGACGTCGTCCGTGACAAAGCCGACTTCGTCGGCGGGGTAGCGATCTT CGCGGTGGTGATCGAGGGCGTCCTCGCGCCTGCCGCCGAGCTCAGCGAGCGGAAGTGGACGCCGCTGTCCCCGGCGACCC AGGAGGTCTCGCGCGGCACCGCCATCGACGAGATCCGGCACCTGACCGTCGCCAGCACCATCCTCCGGGACCACGTGACC GCGCGGCCGCAGGACCGGCCGAGGCTGGCGGAGATCATCCGTTCGGGGGTGCGGTTGTGGGACGAGATCCCGGACCGCCA GTTCGTGATGTACCGCGAGGAACTGTTCCAGCAGGGCATGCACGAGCAGGCCGAGCTGATCGGCGACTACGAGATCTGGC CCGGCGTGCGGTTGCTCGACACCACCGCGGCCCAGCGGTACGACATGGCTGACCAGTGGACGAACGAATTGGCCCAGGCC CGCCTGCCCGACCTGGGGCTGCCGGCCGACCTGCTCGCCTGCGCCTCCCGGTCAGCGCGGTGA
Upstream 100 bases:
>100_bases AACCGCTGCTCAGCTATGCCGGCGGCCTGTTCTCCGGGGTGCTCCCGCCGCTGCAGTCGACCGGACCGAGCGTTGCGAGC AAGAAGGACGAGGCGAGGTC
Downstream 100 bases:
>100_bases GCGCGGTCCCGGCCACGCCGCGCGGGCGGGCGGCGGTGATCGCCGGCGTCGGCGGGTACGTCCCCCCGAACGTCGTCACC AACGACGACCTCGCTGCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 340; Mature: 339
Protein sequence:
>340_residues MTTTATTAAASDAAATGAPEAAWHSAPGLLDGAKTLRLGPEQCGIAYWIDEVAQGTLRDRGARGHRADAAVPPFLRRPGP LHEALVLEFTLRSLAEQAATRLLAHYVASAPGVRELEFYVTQLVDEARHCQVFRDHVAELGPPSAALARELDRTAADYAR LVLEPVVAFTLDVVRDKADFVGGVAIFAVVIEGVLAPAAELSERKWTPLSPATQEVSRGTAIDEIRHLTVASTILRDHVT ARPQDRPRLAEIIRSGVRLWDEIPDRQFVMYREELFQQGMHEQAELIGDYEIWPGVRLLDTTAAQRYDMADQWTNELAQA RLPDLGLPADLLACASRSAR
Sequences:
>Translated_340_residues MTTTATTAAASDAAATGAPEAAWHSAPGLLDGAKTLRLGPEQCGIAYWIDEVAQGTLRDRGARGHRADAAVPPFLRRPGP LHEALVLEFTLRSLAEQAATRLLAHYVASAPGVRELEFYVTQLVDEARHCQVFRDHVAELGPPSAALARELDRTAADYAR LVLEPVVAFTLDVVRDKADFVGGVAIFAVVIEGVLAPAAELSERKWTPLSPATQEVSRGTAIDEIRHLTVASTILRDHVT ARPQDRPRLAEIIRSGVRLWDEIPDRQFVMYREELFQQGMHEQAELIGDYEIWPGVRLLDTTAAQRYDMADQWTNELAQA RLPDLGLPADLLACASRSAR >Mature_339_residues TTTATTAAASDAAATGAPEAAWHSAPGLLDGAKTLRLGPEQCGIAYWIDEVAQGTLRDRGARGHRADAAVPPFLRRPGPL HEALVLEFTLRSLAEQAATRLLAHYVASAPGVRELEFYVTQLVDEARHCQVFRDHVAELGPPSAALARELDRTAADYARL VLEPVVAFTLDVVRDKADFVGGVAIFAVVIEGVLAPAAELSERKWTPLSPATQEVSRGTAIDEIRHLTVASTILRDHVTA RPQDRPRLAEIIRSGVRLWDEIPDRQFVMYREELFQQGMHEQAELIGDYEIWPGVRLLDTTAAQRYDMADQWTNELAQAR LPDLGLPADLLACASRSAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37235; Mature: 37103
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTATTAAASDAAATGAPEAAWHSAPGLLDGAKTLRLGPEQCGIAYWIDEVAQGTLRDR CCCCCCHHHCCCHHCCCCCHHHHCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHC GARGHRADAAVPPFLRRPGPLHEALVLEFTLRSLAEQAATRLLAHYVASAPGVRELEFYV CCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH TQLVDEARHCQVFRDHVAELGPPSAALARELDRTAADYARLVLEPVVAFTLDVVRDKADF HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGGVAIFAVVIEGVLAPAAELSERKWTPLSPATQEVSRGTAIDEIRHLTVASTILRDHVT HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHC ARPQDRPRLAEIIRSGVRLWDEIPDRQFVMYREELFQQGMHEQAELIGDYEIWPGVRLLD CCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHH TTAAQRYDMADQWTNELAQARLPDLGLPADLLACASRSAR HHHHHHHCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCC >Mature Secondary Structure TTTATTAAASDAAATGAPEAAWHSAPGLLDGAKTLRLGPEQCGIAYWIDEVAQGTLRDR CCCCCHHHCCCHHCCCCCHHHHCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHC GARGHRADAAVPPFLRRPGPLHEALVLEFTLRSLAEQAATRLLAHYVASAPGVRELEFYV CCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH TQLVDEARHCQVFRDHVAELGPPSAALARELDRTAADYARLVLEPVVAFTLDVVRDKADF HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGGVAIFAVVIEGVLAPAAELSERKWTPLSPATQEVSRGTAIDEIRHLTVASTILRDHVT HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHC ARPQDRPRLAEIIRSGVRLWDEIPDRQFVMYREELFQQGMHEQAELIGDYEIWPGVRLLD CCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHH TTAAQRYDMADQWTNELAQARLPDLGLPADLLACASRSAR HHHHHHHCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA