Click here to switch to the map view.

The map label for this gene is ydfJ [H]

Identifier: 158317469

GI number: 158317469

Start: 6943295

End: 6945553

Strand: Direct

Name: ydfJ [H]

Synonym: Franean1_5721

Alternate gene names: 158317469

Gene position: 6943295-6945553 (Clockwise)

Preceding gene: 158317458

Following gene: 158317471

Centisome position: 77.3

GC content: 70.61

Gene sequence:

>2259_bases
GTGGCAACGCTCGCGCGCTGGTGCTTCCAGCACCGCCGGCTCGTCCTGTTCCTGTGGATCGCCGCCCTCGTGGGGCTGAC
GGCGCTCGGCCGGGTGACGGGCAGCGACTACAAGGACGCCTTCTCCCTGCCTGGGACCGACTCCCAGAAGGCCATCGACA
TCCTCGAACGCGACTTCCCGGCGCAGTCCGGCGACAGCGCGTCCATCGTGCTGCACGCCCGCACCGGTGCGCTGAGCGAT
CCCGCGGTCGAGCCCCGGGCAACGGAGATGTTGGCGAAGATCGCCGACCTGCCCCACGTCGCCGAGGTGGTCAGCCCGTT
CACCGTCGACGGCGAGGGCCAGACCAACCCTGACGGCACCACCGCCTTCGCGACCGTCGCGCTCGACCTGCCCGGCAACG
AGCTGCCCCTCGACGACATCGAGCGCCTGGTCGACACGGCCCGCTCCTATGACTCCGGCGCGCTGCAGGTCGAGCTCACC
GGGCAGGTCGTCGCGATCGTCGAGCAGCCGCAGCAGAGCGCGAGCGAGCTCATCGGCGTCGTCGCCGCCGCGGTCATCCT
CTTCCTCGCCTTCGGCTCCCTGCTCGCGGTGACCCTGCCCCTGATCACCGCCATCATGGCGCTCGGCGTCGGCATGGCCC
TCATCGTCCAGGTCTCGCACCTGACGACCGTCGCCGAGTTCAGCACCATGCTCGCGACGCTGATCGGCCTCGGCGTCGGC
ATCGACTACGCGCTGTTCATCGTGAACCGCCACCGCATCGGCCTGCGCGCCGGCCGCACGCCGGAGGAGTCCGCGGTCAC
CGCGGTCAACACCTCCGGCCGCGCCGTGATCTTCGCCGGCATGACGGTCTGCATCGCGCTGCTGGGCCTGTTCGCACTGG
GGGTGACCTTCCTCTACGGGGTCGCCCTCGCCGCGGCCCTGACCGTCGCGATGACGATGCTCGCCTCGGTCACCCTGCTG
CCCGCCCTGCTCGGCTTCTACGGGTCGAAGGTGCTCAGCCGCCGGCAGCGGCGCCGGATGGCCGAGCACGGCCCCGAGCC
GGAGCAGCCCTCGGGGTTCTGGTGGCGGTGGGCCAAGGGTGTGGAGCGCCGCCCGGCGGTGCTCGCGGTGCTCAGCGCCG
GTGTGATCGTCCTGATCGCGATCCCGTTCCTGTCCCTGCGGCTCGGCTCGTCCGACCTCGGGAACGGTGCCGACACCAAG
ACCAGCAAACGCGGCTACGACCTGCTCGCCGACGGCTTCGGCCCCGGCTTCAACGGCCCGTTCATGCTGGTCACCGAGAT
CAACTCGCCAGCTGACCTGCAGACCATGAACCAGGCTGTCGAGGCGGCCCGCAAGGCGGAGGGTGTCGCCTCGGTGACCC
CGCCGCGCCAGAGCCCGAACGGCCACGCCGCAATCGCCACCCTCTACCCGACGACGAGCCCGCAGGCGGCCGAGACCGCC
ACCCTGCTCGACCGGTTGCGCGACGACGTCATCCCGGCGGCGACCGGGGGCGCCGCCTCGCCGGTCTACGTCGGCGGCAT
CACCGCGGTCTTCGAGGACTTCTCCGGAGTGCTGTCGAGCAAGCTGCCGCTGTTCATCGGGATCGTCGTGGTCCTCGCGT
TCCTGCTGCTGGTCGTGGTCTTCCGCAGCCTGCTCATTCCGCTGACGGCCTCGCTGATGAACCTGCTGGCGGTGGGCGCG
GCGTTCGGCGCCGTGGTGGCCGTGTTCCAGTGGGGCTGGCTGTCGGACCTGCTCGGCATCAGCCCCGGGCCGATCGAGTC
GTTCCTTCCGGTCATGCTCTTCGCGATCCTGTTCGGGCTCTCCATGGACTACGAGGTGTTCCTGGTAAGCCGCATGCACG
AGGAGTGGACAGCCCGGCGAGACAACCGCATCGCGGTCTCCCTGGGCCAGGCCGAGACCGGCCGGGTCATTTCCGCCGCC
GGCGCAATCATGACCCTGGTGTTCGCCTCGTTCATCCTCGGCGACGACCGGGTCATCAAACTGTTCGGCCTCGGCCTGGC
ACTCGCCATCCTGCTGGACGCGTTCGTCATCCGCACGATTCTGGTGCCGGCCCTCATGCACCTGTTCGGCCGTGCGAACT
GGTGGCTGCCGAAGGGCCTCGACCGGGTCCTGCCACGGGTCTCCGTCGAGTCCGCGGAGGACATCGAGGAGATCCGCCAC
ACGCCGCTGCCCGCGGACGCGGTCGGTGACACCGTTCCCGCGCAGCCGCACGGCCCCGCCGACGGCCGGGACGCCACCGA
GCCCGAGCGCGCCCACTAG

Upstream 100 bases:

>100_bases
TGCACCTCGATCAGGGGCACGACGAACGCCGCCGTCGATCAGTAGGTCAACTGGCAGACCAGCCACAGACCGGCACAACC
AGCATCTCCGAGGGGAAATC

Downstream 100 bases:

>100_bases
GCGCTCTAGCCGGACTCGCTGGTCCTGACTCGCCAGCCGGTGCCCGGCCTGGCTCGCCCTCCGACAGGGGCGAACCAGGC
CGGGCATCCGCCGTTTGGGG

Product: MMPL domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 752; Mature: 751

Protein sequence:

>752_residues
MATLARWCFQHRRLVLFLWIAALVGLTALGRVTGSDYKDAFSLPGTDSQKAIDILERDFPAQSGDSASIVLHARTGALSD
PAVEPRATEMLAKIADLPHVAEVVSPFTVDGEGQTNPDGTTAFATVALDLPGNELPLDDIERLVDTARSYDSGALQVELT
GQVVAIVEQPQQSASELIGVVAAAVILFLAFGSLLAVTLPLITAIMALGVGMALIVQVSHLTTVAEFSTMLATLIGLGVG
IDYALFIVNRHRIGLRAGRTPEESAVTAVNTSGRAVIFAGMTVCIALLGLFALGVTFLYGVALAAALTVAMTMLASVTLL
PALLGFYGSKVLSRRQRRRMAEHGPEPEQPSGFWWRWAKGVERRPAVLAVLSAGVIVLIAIPFLSLRLGSSDLGNGADTK
TSKRGYDLLADGFGPGFNGPFMLVTEINSPADLQTMNQAVEAARKAEGVASVTPPRQSPNGHAAIATLYPTTSPQAAETA
TLLDRLRDDVIPAATGGAASPVYVGGITAVFEDFSGVLSSKLPLFIGIVVVLAFLLLVVVFRSLLIPLTASLMNLLAVGA
AFGAVVAVFQWGWLSDLLGISPGPIESFLPVMLFAILFGLSMDYEVFLVSRMHEEWTARRDNRIAVSLGQAETGRVISAA
GAIMTLVFASFILGDDRVIKLFGLGLALAILLDAFVIRTILVPALMHLFGRANWWLPKGLDRVLPRVSVESAEDIEEIRH
TPLPADAVGDTVPAQPHGPADGRDATEPERAH

Sequences:

>Translated_752_residues
MATLARWCFQHRRLVLFLWIAALVGLTALGRVTGSDYKDAFSLPGTDSQKAIDILERDFPAQSGDSASIVLHARTGALSD
PAVEPRATEMLAKIADLPHVAEVVSPFTVDGEGQTNPDGTTAFATVALDLPGNELPLDDIERLVDTARSYDSGALQVELT
GQVVAIVEQPQQSASELIGVVAAAVILFLAFGSLLAVTLPLITAIMALGVGMALIVQVSHLTTVAEFSTMLATLIGLGVG
IDYALFIVNRHRIGLRAGRTPEESAVTAVNTSGRAVIFAGMTVCIALLGLFALGVTFLYGVALAAALTVAMTMLASVTLL
PALLGFYGSKVLSRRQRRRMAEHGPEPEQPSGFWWRWAKGVERRPAVLAVLSAGVIVLIAIPFLSLRLGSSDLGNGADTK
TSKRGYDLLADGFGPGFNGPFMLVTEINSPADLQTMNQAVEAARKAEGVASVTPPRQSPNGHAAIATLYPTTSPQAAETA
TLLDRLRDDVIPAATGGAASPVYVGGITAVFEDFSGVLSSKLPLFIGIVVVLAFLLLVVVFRSLLIPLTASLMNLLAVGA
AFGAVVAVFQWGWLSDLLGISPGPIESFLPVMLFAILFGLSMDYEVFLVSRMHEEWTARRDNRIAVSLGQAETGRVISAA
GAIMTLVFASFILGDDRVIKLFGLGLALAILLDAFVIRTILVPALMHLFGRANWWLPKGLDRVLPRVSVESAEDIEEIRH
TPLPADAVGDTVPAQPHGPADGRDATEPERAH
>Mature_751_residues
ATLARWCFQHRRLVLFLWIAALVGLTALGRVTGSDYKDAFSLPGTDSQKAIDILERDFPAQSGDSASIVLHARTGALSDP
AVEPRATEMLAKIADLPHVAEVVSPFTVDGEGQTNPDGTTAFATVALDLPGNELPLDDIERLVDTARSYDSGALQVELTG
QVVAIVEQPQQSASELIGVVAAAVILFLAFGSLLAVTLPLITAIMALGVGMALIVQVSHLTTVAEFSTMLATLIGLGVGI
DYALFIVNRHRIGLRAGRTPEESAVTAVNTSGRAVIFAGMTVCIALLGLFALGVTFLYGVALAAALTVAMTMLASVTLLP
ALLGFYGSKVLSRRQRRRMAEHGPEPEQPSGFWWRWAKGVERRPAVLAVLSAGVIVLIAIPFLSLRLGSSDLGNGADTKT
SKRGYDLLADGFGPGFNGPFMLVTEINSPADLQTMNQAVEAARKAEGVASVTPPRQSPNGHAAIATLYPTTSPQAAETAT
LLDRLRDDVIPAATGGAASPVYVGGITAVFEDFSGVLSSKLPLFIGIVVVLAFLLLVVVFRSLLIPLTASLMNLLAVGAA
FGAVVAVFQWGWLSDLLGISPGPIESFLPVMLFAILFGLSMDYEVFLVSRMHEEWTARRDNRIAVSLGQAETGRVISAAG
AIMTLVFASFILGDDRVIKLFGLGLALAILLDAFVIRTILVPALMHLFGRANWWLPKGLDRVLPRVSVESAEDIEEIRHT
PLPADAVGDTVPAQPHGPADGRDATEPERAH

Specific function: Unknown

COG id: COG2409

COG function: function code R; Predicted drug exporters of the RND superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mmpL family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004869
- InterPro:   IPR000731 [H]

Pfam domain/function: PF03176 MMPL [H]

EC number: NA

Molecular weight: Translated: 79621; Mature: 79490

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: PS50156 SSD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATLARWCFQHRRLVLFLWIAALVGLTALGRVTGSDYKDAFSLPGTDSQKAIDILERDFP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCHHHHHHHHHCCC
AQSGDSASIVLHARTGALSDPAVEPRATEMLAKIADLPHVAEVVSPFTVDGEGQTNPDGT
CCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHCCCEECCCCCCCCCCC
TAFATVALDLPGNELPLDDIERLVDTARSYDSGALQVELTGQVVAIVEQPQQSASELIGV
EEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCEEEEHHCCHHHHHHHHHH
VAAAVILFLAFGSLLAVTLPLITAIMALGVGMALIVQVSHLTTVAEFSTMLATLIGLGVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
IDYALFIVNRHRIGLRAGRTPEESAVTAVNTSGRAVIFAGMTVCIALLGLFALGVTFLYG
HHHHHHEEEHHHCCCCCCCCCCCCCEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHH
VALAAALTVAMTMLASVTLLPALLGFYGSKVLSRRQRRRMAEHGPEPEQPSGFWWRWAKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCC
VERRPAVLAVLSAGVIVLIAIPFLSLRLGSSDLGNGADTKTSKRGYDLLADGFGPGFNGP
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCC
FMLVTEINSPADLQTMNQAVEAARKAEGVASVTPPRQSPNGHAAIATLYPTTSPQAAETA
EEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHH
TLLDRLRDDVIPAATGGAASPVYVGGITAVFEDFSGVLSSKLPLFIGIVVVLAFLLLVVV
HHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
FRSLLIPLTASLMNLLAVGAAFGAVVAVFQWGWLSDLLGISPGPIESFLPVMLFAILFGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCC
SMDYEVFLVSRMHEEWTARRDNRIAVSLGQAETGRVISAAGAIMTLVFASFILGDDRVIK
CCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHH
LFGLGLALAILLDAFVIRTILVPALMHLFGRANWWLPKGLDRVLPRVSVESAEDIEEIRH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHC
TPLPADAVGDTVPAQPHGPADGRDATEPERAH
CCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ATLARWCFQHRRLVLFLWIAALVGLTALGRVTGSDYKDAFSLPGTDSQKAIDILERDFP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCHHHHHHHHHCCC
AQSGDSASIVLHARTGALSDPAVEPRATEMLAKIADLPHVAEVVSPFTVDGEGQTNPDGT
CCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHCCCEECCCCCCCCCCC
TAFATVALDLPGNELPLDDIERLVDTARSYDSGALQVELTGQVVAIVEQPQQSASELIGV
EEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCEEEEHHCCHHHHHHHHHH
VAAAVILFLAFGSLLAVTLPLITAIMALGVGMALIVQVSHLTTVAEFSTMLATLIGLGVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
IDYALFIVNRHRIGLRAGRTPEESAVTAVNTSGRAVIFAGMTVCIALLGLFALGVTFLYG
HHHHHHEEEHHHCCCCCCCCCCCCCEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHH
VALAAALTVAMTMLASVTLLPALLGFYGSKVLSRRQRRRMAEHGPEPEQPSGFWWRWAKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCC
VERRPAVLAVLSAGVIVLIAIPFLSLRLGSSDLGNGADTKTSKRGYDLLADGFGPGFNGP
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCC
FMLVTEINSPADLQTMNQAVEAARKAEGVASVTPPRQSPNGHAAIATLYPTTSPQAAETA
EEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHH
TLLDRLRDDVIPAATGGAASPVYVGGITAVFEDFSGVLSSKLPLFIGIVVVLAFLLLVVV
HHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
FRSLLIPLTASLMNLLAVGAAFGAVVAVFQWGWLSDLLGISPGPIESFLPVMLFAILFGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCC
SMDYEVFLVSRMHEEWTARRDNRIAVSLGQAETGRVISAAGAIMTLVFASFILGDDRVIK
CCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHH
LFGLGLALAILLDAFVIRTILVPALMHLFGRANWWLPKGLDRVLPRVSVESAEDIEEIRH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHC
TPLPADAVGDTVPAQPHGPADGRDATEPERAH
CCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]