Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is acrR [C]

Identifier: 158317458

GI number: 158317458

Start: 6928186

End: 6928854

Strand: Direct

Name: acrR [C]

Synonym: Franean1_5710

Alternate gene names: 158317458

Gene position: 6928186-6928854 (Clockwise)

Preceding gene: 158317457

Following gene: 158317469

Centisome position: 77.13

GC content: 72.65

Gene sequence:

>669_bases
GTGACACGCAGCCGTCGGCCCGAACAGACGGCCGATACCCGACAGGCACTGCTGGCCGCGGCAAGGCGCCGGTTCGCCGA
ACAGGGCTATGCCGCGACCGGCACCGAAGAGATCGTCGCGGACGCGCGGGTCACCCGGGGAGCTCTTTACCATCACTTCC
GCGACAAGGCTGACCTGTTCCGCACGGTCATGGAGCAGGTCGCGATGGAGGTCGCGGAGCAGCTGGTCGCGGGTGAGCTG
GCCCGCGGCGCGGAGCTGCCCAGCGACGCCTGGACGCAGCTGCGCACGGGCTTCCAGTCGCTGCTGGACATCTCCACCAC
CGACAGCGACTTCCAGCGCATCGTGCTCATCGACGGCCCGGCTGTCCTCGGCAACGACGCCTGGGACCAGCTCGTCGAGC
AGCACGGCTACCGCCTGCTCTCGGAATGGCTCGAGCGGGCGGTGGCCGAGGGCCGCATCGACCCGCTGCCGGTGGCACCG
CTGACCAGGCTCGTCGCGGCGCTGCTGTCCGAGGCGAGCCTGTACACCGCGCGGGCGGCGGATCCCGACCGGGCCCGCAC
CGATGTCGGGATCGTGCTCGACCGTCTCCTGCGCGGCCTGGGCCGGCGCGGCGGCGACCTGGCCGACCAGCCCGCCGTCA
GCGCCGGCGCTCCTCCCGCGTCCGACTGA

Upstream 100 bases:

>100_bases
CACCCCGGAGGGGCCGTGACGGACCTCGACGAGGATGTGGAACGGACCGCGTGGCGGGCAGCCGCCGGTGTCTCGGCCGA
ACCTGCACCATAATCAAGGG

Downstream 100 bases:

>100_bases
CTGACCGACTGCGACAGCACGACGGACCGCCGAGATCCGGCGGCCGCTACGAAGACACCCGGCCGCCTACCGCTGTCCCG
CGGGCACGTCCCGCGGGACA

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator TetR Family; Transcriptional Regulator TetR Family Protein; Regulatory Protein TetR; TetR Family Transcriptional Regulatory Protein; Transcriptional Regulator Protein TetR Family; TetR-Type Transcriptional Regulator; TetR Family Regulatory Protein

Number of amino acids: Translated: 222; Mature: 221

Protein sequence:

>222_residues
MTRSRRPEQTADTRQALLAAARRRFAEQGYAATGTEEIVADARVTRGALYHHFRDKADLFRTVMEQVAMEVAEQLVAGEL
ARGAELPSDAWTQLRTGFQSLLDISTTDSDFQRIVLIDGPAVLGNDAWDQLVEQHGYRLLSEWLERAVAEGRIDPLPVAP
LTRLVAALLSEASLYTARAADPDRARTDVGIVLDRLLRGLGRRGGDLADQPAVSAGAPPASD

Sequences:

>Translated_222_residues
MTRSRRPEQTADTRQALLAAARRRFAEQGYAATGTEEIVADARVTRGALYHHFRDKADLFRTVMEQVAMEVAEQLVAGEL
ARGAELPSDAWTQLRTGFQSLLDISTTDSDFQRIVLIDGPAVLGNDAWDQLVEQHGYRLLSEWLERAVAEGRIDPLPVAP
LTRLVAALLSEASLYTARAADPDRARTDVGIVLDRLLRGLGRRGGDLADQPAVSAGAPPASD
>Mature_221_residues
TRSRRPEQTADTRQALLAAARRRFAEQGYAATGTEEIVADARVTRGALYHHFRDKADLFRTVMEQVAMEVAEQLVAGELA
RGAELPSDAWTQLRTGFQSLLDISTTDSDFQRIVLIDGPAVLGNDAWDQLVEQHGYRLLSEWLERAVAEGRIDPLPVAPL
TRLVAALLSEASLYTARAADPDRARTDVGIVLDRLLRGLGRRGGDLADQPAVSAGAPPASD

Specific function: Potential Regulator Protein For The Acrab Genes. [C]

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786669, Length=106, Percent_Identity=37.7358490566038, Blast_Score=65, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24200; Mature: 24069

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRSRRPEQTADTRQALLAAARRRFAEQGYAATGTEEIVADARVTRGALYHHFRDKADLF
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RTVMEQVAMEVAEQLVAGELARGAELPSDAWTQLRTGFQSLLDISTTDSDFQRIVLIDGP
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECC
AVLGNDAWDQLVEQHGYRLLSEWLERAVAEGRIDPLPVAPLTRLVAALLSEASLYTARAA
CHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
DPDRARTDVGIVLDRLLRGLGRRGGDLADQPAVSAGAPPASD
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TRSRRPEQTADTRQALLAAARRRFAEQGYAATGTEEIVADARVTRGALYHHFRDKADLF
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RTVMEQVAMEVAEQLVAGELARGAELPSDAWTQLRTGFQSLLDISTTDSDFQRIVLIDGP
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECC
AVLGNDAWDQLVEQHGYRLLSEWLERAVAEGRIDPLPVAPLTRLVAALLSEASLYTARAA
CHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
DPDRARTDVGIVLDRLLRGLGRRGGDLADQPAVSAGAPPASD
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA