| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is acrR [C]
Identifier: 158317458
GI number: 158317458
Start: 6928186
End: 6928854
Strand: Direct
Name: acrR [C]
Synonym: Franean1_5710
Alternate gene names: 158317458
Gene position: 6928186-6928854 (Clockwise)
Preceding gene: 158317457
Following gene: 158317469
Centisome position: 77.13
GC content: 72.65
Gene sequence:
>669_bases GTGACACGCAGCCGTCGGCCCGAACAGACGGCCGATACCCGACAGGCACTGCTGGCCGCGGCAAGGCGCCGGTTCGCCGA ACAGGGCTATGCCGCGACCGGCACCGAAGAGATCGTCGCGGACGCGCGGGTCACCCGGGGAGCTCTTTACCATCACTTCC GCGACAAGGCTGACCTGTTCCGCACGGTCATGGAGCAGGTCGCGATGGAGGTCGCGGAGCAGCTGGTCGCGGGTGAGCTG GCCCGCGGCGCGGAGCTGCCCAGCGACGCCTGGACGCAGCTGCGCACGGGCTTCCAGTCGCTGCTGGACATCTCCACCAC CGACAGCGACTTCCAGCGCATCGTGCTCATCGACGGCCCGGCTGTCCTCGGCAACGACGCCTGGGACCAGCTCGTCGAGC AGCACGGCTACCGCCTGCTCTCGGAATGGCTCGAGCGGGCGGTGGCCGAGGGCCGCATCGACCCGCTGCCGGTGGCACCG CTGACCAGGCTCGTCGCGGCGCTGCTGTCCGAGGCGAGCCTGTACACCGCGCGGGCGGCGGATCCCGACCGGGCCCGCAC CGATGTCGGGATCGTGCTCGACCGTCTCCTGCGCGGCCTGGGCCGGCGCGGCGGCGACCTGGCCGACCAGCCCGCCGTCA GCGCCGGCGCTCCTCCCGCGTCCGACTGA
Upstream 100 bases:
>100_bases CACCCCGGAGGGGCCGTGACGGACCTCGACGAGGATGTGGAACGGACCGCGTGGCGGGCAGCCGCCGGTGTCTCGGCCGA ACCTGCACCATAATCAAGGG
Downstream 100 bases:
>100_bases CTGACCGACTGCGACAGCACGACGGACCGCCGAGATCCGGCGGCCGCTACGAAGACACCCGGCCGCCTACCGCTGTCCCG CGGGCACGTCCCGCGGGACA
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator; Transcriptional Regulator TetR Family; Transcriptional Regulator TetR Family Protein; Regulatory Protein TetR; TetR Family Transcriptional Regulatory Protein; Transcriptional Regulator Protein TetR Family; TetR-Type Transcriptional Regulator; TetR Family Regulatory Protein
Number of amino acids: Translated: 222; Mature: 221
Protein sequence:
>222_residues MTRSRRPEQTADTRQALLAAARRRFAEQGYAATGTEEIVADARVTRGALYHHFRDKADLFRTVMEQVAMEVAEQLVAGEL ARGAELPSDAWTQLRTGFQSLLDISTTDSDFQRIVLIDGPAVLGNDAWDQLVEQHGYRLLSEWLERAVAEGRIDPLPVAP LTRLVAALLSEASLYTARAADPDRARTDVGIVLDRLLRGLGRRGGDLADQPAVSAGAPPASD
Sequences:
>Translated_222_residues MTRSRRPEQTADTRQALLAAARRRFAEQGYAATGTEEIVADARVTRGALYHHFRDKADLFRTVMEQVAMEVAEQLVAGEL ARGAELPSDAWTQLRTGFQSLLDISTTDSDFQRIVLIDGPAVLGNDAWDQLVEQHGYRLLSEWLERAVAEGRIDPLPVAP LTRLVAALLSEASLYTARAADPDRARTDVGIVLDRLLRGLGRRGGDLADQPAVSAGAPPASD >Mature_221_residues TRSRRPEQTADTRQALLAAARRRFAEQGYAATGTEEIVADARVTRGALYHHFRDKADLFRTVMEQVAMEVAEQLVAGELA RGAELPSDAWTQLRTGFQSLLDISTTDSDFQRIVLIDGPAVLGNDAWDQLVEQHGYRLLSEWLERAVAEGRIDPLPVAPL TRLVAALLSEASLYTARAADPDRARTDVGIVLDRLLRGLGRRGGDLADQPAVSAGAPPASD
Specific function: Potential Regulator Protein For The Acrab Genes. [C]
COG id: COG1309
COG function: function code K; Transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786669, Length=106, Percent_Identity=37.7358490566038, Blast_Score=65, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24200; Mature: 24069
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRSRRPEQTADTRQALLAAARRRFAEQGYAATGTEEIVADARVTRGALYHHFRDKADLF CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH RTVMEQVAMEVAEQLVAGELARGAELPSDAWTQLRTGFQSLLDISTTDSDFQRIVLIDGP HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECC AVLGNDAWDQLVEQHGYRLLSEWLERAVAEGRIDPLPVAPLTRLVAALLSEASLYTARAA CHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC DPDRARTDVGIVLDRLLRGLGRRGGDLADQPAVSAGAPPASD CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TRSRRPEQTADTRQALLAAARRRFAEQGYAATGTEEIVADARVTRGALYHHFRDKADLF CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH RTVMEQVAMEVAEQLVAGELARGAELPSDAWTQLRTGFQSLLDISTTDSDFQRIVLIDGP HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECC AVLGNDAWDQLVEQHGYRLLSEWLERAVAEGRIDPLPVAPLTRLVAALLSEASLYTARAA CHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC DPDRARTDVGIVLDRLLRGLGRRGGDLADQPAVSAGAPPASD CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA