| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is coxM [H]
Identifier: 158317432
GI number: 158317432
Start: 6901268
End: 6902167
Strand: Reverse
Name: coxM [H]
Synonym: Franean1_5684
Alternate gene names: 158317432
Gene position: 6902167-6901268 (Counterclockwise)
Preceding gene: 158317435
Following gene: 158317431
Centisome position: 76.84
GC content: 78.78
Gene sequence:
>900_bases ATGACGACGCCCGGCGGTCCGTCCACCGCTCTGCACCGGCCCGGGACGGTCGGCGAGGCCGTCGCAGCCCTCGCCGCCGA GGCACGGGCGGGCCGGCCGGTCGAGCTGCTGGCCGGCGGTACCGATCTGGTGCCCGCGCTGCGCACCGGGACGCGCCGGC CGGCGGCGATCGTCGCGCTGCGCCGGGTGCTGGAGCTGCGGGTGCGCGGGGCAGGCGCGGACACCCTCACGATCGGCGCC GGGGTCACCTACACCGAGCTGGCCGGATGGTCACTCTCGCCCGGCCTGGCGGCGACGTCCCGGGTGGTCGGGTCCGTCCA GATCCGCAACTGCGGGACGGTCGGCGGGGCGCTCGGCTCCGCCAACCCGCGCGGCGACCTCCTCACGTTCCTCACCGCGG CCCAGGCCGAGGTGCTGCTCGCCTCCGAGGACGGGTCGCGCGCCGCGGGCCTGGACGACTTCCTGAGCGCCGGCCGCCTG CCGGGCGAGCTGGTGACGGCTGTCCGGGTGCCCCGCCCGAGCGGCCCGCAGACCTACCTCAAGATCGGTGGCCGGCAGGC CGCGTTCCCGTCGCTGGTGTCCTGCGCGTTGCTCGTCGACCGGGTCCGCGAGCGGGTCTGCTGCGCCGTGGGCGGCGTGG CTGCCCGGCCGTGGCGGGTGGCCGAGGCCGAGCGGCTGGCCGCCGCCGACGTCGACTGGTCCACTGGGACGGCCCCGGCC GCCCTGGCACGGCGCTTCGGTGAGCTGGCCGCGGCCGGTGTCCGCGCGGCGCCGCCGCTGGGAGAGGACCCGCGCCATCC CCTGGAGTACCGGGTGCACGCGGCCGGCGTGCTGGCCGCCCGGGCCTTCGCCCGATGCCTCACGGCCCGGTCGGCGCCGC GGCGCGAGAGTGCCCCGTGA
Upstream 100 bases:
>100_bases TACCGGGTCGCCTCCGGCGACTCTCAGCAGTGAACACAAAGATACGTAGAGCAGTGTTCGTTGAACATCGACGTAACGTC CCCCCACTATCGTCGGGCCC
Downstream 100 bases:
>100_bases GCGGCGGCGTGCCTGGTCACCTGGGCGGGGAGCGCCGGCTTTCCTACCACCTGAGCATCGACGGCTCCCGGCGCGCCGTT ACCGGGGCGCGGCTCGAGGA
Product: FAD-binding molybdopterin dehydrogenase
Products: NA
Alternate protein names: CO dehydrogenase subunit M; CO-DH M [H]
Number of amino acids: Translated: 299; Mature: 298
Protein sequence:
>299_residues MTTPGGPSTALHRPGTVGEAVAALAAEARAGRPVELLAGGTDLVPALRTGTRRPAAIVALRRVLELRVRGAGADTLTIGA GVTYTELAGWSLSPGLAATSRVVGSVQIRNCGTVGGALGSANPRGDLLTFLTAAQAEVLLASEDGSRAAGLDDFLSAGRL PGELVTAVRVPRPSGPQTYLKIGGRQAAFPSLVSCALLVDRVRERVCCAVGGVAARPWRVAEAERLAAADVDWSTGTAPA ALARRFGELAAAGVRAAPPLGEDPRHPLEYRVHAAGVLAARAFARCLTARSAPRRESAP
Sequences:
>Translated_299_residues MTTPGGPSTALHRPGTVGEAVAALAAEARAGRPVELLAGGTDLVPALRTGTRRPAAIVALRRVLELRVRGAGADTLTIGA GVTYTELAGWSLSPGLAATSRVVGSVQIRNCGTVGGALGSANPRGDLLTFLTAAQAEVLLASEDGSRAAGLDDFLSAGRL PGELVTAVRVPRPSGPQTYLKIGGRQAAFPSLVSCALLVDRVRERVCCAVGGVAARPWRVAEAERLAAADVDWSTGTAPA ALARRFGELAAAGVRAAPPLGEDPRHPLEYRVHAAGVLAARAFARCLTARSAPRRESAP >Mature_298_residues TTPGGPSTALHRPGTVGEAVAALAAEARAGRPVELLAGGTDLVPALRTGTRRPAAIVALRRVLELRVRGAGADTLTIGAG VTYTELAGWSLSPGLAATSRVVGSVQIRNCGTVGGALGSANPRGDLLTFLTAAQAEVLLASEDGSRAAGLDDFLSAGRLP GELVTAVRVPRPSGPQTYLKIGGRQAAFPSLVSCALLVDRVRERVCCAVGGVAARPWRVAEAERLAAADVDWSTGTAPAA LARRFGELAAAGVRAAPPLGEDPRHPLEYRVHAAGVLAARAFARCLTARSAPRRESAP
Specific function: Catalyzes the oxidation of carbon monoxide to carbon dioxide [H]
COG id: COG1319
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding PCMH-type domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005107 - InterPro: IPR016169 - InterPro: IPR016166 - InterPro: IPR016167 - InterPro: IPR002346 [H]
Pfam domain/function: PF03450 CO_deh_flav_C; PF00941 FAD_binding_5 [H]
EC number: =1.2.99.2 [H]
Molecular weight: Translated: 30534; Mature: 30403
Theoretical pI: Translated: 10.91; Mature: 10.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPGGPSTALHRPGTVGEAVAALAAEARAGRPVELLAGGTDLVPALRTGTRRPAAIVAL CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHCCCCCHHHHHHH RRVLELRVRGAGADTLTIGAGVTYTELAGWSLSPGLAATSRVVGSVQIRNCGTVGGALGS HHHHHHHHCCCCCCEEEECCCCCHHHHCCCCCCCCHHHHHHHHHEEEECCCCCCCCCCCC ANPRGDLLTFLTAAQAEVLLASEDGSRAAGLDDFLSAGRLPGELVTAVRVPRPSGPQTYL CCCCHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHCCCCCHHHHHHEECCCCCCCCHHE KIGGRQAAFPSLVSCALLVDRVRERVCCAVGGVAARPWRVAEAERLAAADVDWSTGTAPA EECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCHHH ALARRFGELAAAGVRAAPPLGEDPRHPLEYRVHAAGVLAARAFARCLTARSAPRRESAP HHHHHHHHHHHCCCCCCCCCCCCCCCCHHEEHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TTPGGPSTALHRPGTVGEAVAALAAEARAGRPVELLAGGTDLVPALRTGTRRPAAIVAL CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHCCCCCHHHHHHH RRVLELRVRGAGADTLTIGAGVTYTELAGWSLSPGLAATSRVVGSVQIRNCGTVGGALGS HHHHHHHHCCCCCCEEEECCCCCHHHHCCCCCCCCHHHHHHHHHEEEECCCCCCCCCCCC ANPRGDLLTFLTAAQAEVLLASEDGSRAAGLDDFLSAGRLPGELVTAVRVPRPSGPQTYL CCCCHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHCCCCCHHHHHHEECCCCCCCCHHE KIGGRQAAFPSLVSCALLVDRVRERVCCAVGGVAARPWRVAEAERLAAADVDWSTGTAPA EECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCHHH ALARRFGELAAAGVRAAPPLGEDPRHPLEYRVHAAGVLAARAFARCLTARSAPRRESAP HHHHHHHHHHHCCCCCCCCCCCCCCCCHHEEHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7721710; 1510563; 2818128; 10430865; 12475995 [H]