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The map label for this gene is pucD [H]

Identifier: 158317430

GI number: 158317430

Start: 6898381

End: 6900756

Strand: Reverse

Name: pucD [H]

Synonym: Franean1_5682

Alternate gene names: 158317430

Gene position: 6900756-6898381 (Counterclockwise)

Preceding gene: 158317431

Following gene: 158317429

Centisome position: 76.83

GC content: 75.72

Gene sequence:

>2376_bases
GTGGGCATGACCGGCCGGGCGCGAGGCGTCGGGGGATCGGTGCTCCGTCCCGACGGGTCGGCCAAGGCCGGCGGGACGTT
CGTCTACGCCGGCGACCTCAGCGCCCCCGGCATGCTGCACGCCCGGACCCTGCGCTCGCCCCACCCGCGGGCGCGCATCA
GGCGGGTCGACACCGCCGCGGCCCTGCGCATCCCGGGAGTCGCCGCGGTGGTGACGGCGGTGGACGTCCCCGGTGTGGCG
ACCTACGGCCTCATCGTGGCCGACCAGCCGGTCTTCGCCGCCACCGAGACCCGTTACGCCGGCGAGCCGGTCGCCGCCGT
CGCCGCGGTCGATGCGCCGACCGCCCGGCGCGCGCTGGCGGCCGTCGAGGTCGAGTACGAGCCGCTGCCGCCCCTCGTCG
ATCCCGAGGTGGCCGCCGGGCCGGGTGCCGAACCGCTCCACCCGGACGGCAACGTGTTCCGTGAGATCACCCTGAGACAC
GGCGATCCCGACGCCGCCGGCCCGGTGGTCGTCGAGGACAGCTACCTCGTCGGCATGCAGGACCAGGCCTTCCTCGCGCC
GGAGGCGGCGCTGGTCGTGCCGGCCGCCGACGGGGGGGTCGACATGTGGCTGGCCACCCAGTGGCTGCACTCCGACCGCG
AACAGATCGCCGCCTGCCTGGGGCTGCCCGAGGAGCTGGTCCGGCTCGAGCTCGCCGGCGTCGGCGGCGCGTTCGGTGGC
CGCGAGGACGTCACGCTGCAGGTCCACGGCGCGCTGCTCGCCCGGGCCACCGGGACGCCGGTCCGCATCGCCTACGACCG
GGTCGAGTCCTTCCTGGGCCACCCGCACCGCCATCCCGCGCGGATGTGGTTCCGCCACACCGCGACCGCGGCGGGTGACC
TGGTCAGCGTGCACGCGCGGATCATCATGGACGGCGGGGCGTACGCCTCGTCGTCACCCGCGGTGATCGCCAACGCCGTC
ACGCACGCCGCCGGCCCGTACCGGGTGCCGAACGCGCGGCTGGACGGGCTCGTCGTGCGCACCAACAACCCGCCGTGCGG
GGCGATGCGCGGGTTCGGGGTCCCGCAGGTCACGATCGGACACGAGGCGCAGATGGACCGGCTCGCGGACCGCCTCCGGA
TGGACCCGGTCGAGCTGCGGGTGCGCAACGCACTGCGGCCCGGCGACGTCCTGCCCACCGGTCAGGTCCTCGGGCCGCCG
CTGCCGGCGCGGGAGGCGATCGAGGCGGTCGCGGCGCGCCCGCTGCCGGCGGCGCTCACCGCCGCCTCGCCGGTGACGGC
CCGTCCCGGGGGGCGCGGCGCGCATGCGGACCTCGCCCGTGTCCGCCGCGGCGTCGGATACGCCCTGGCCTACAAGAACC
TTTTGTTCTCCGAGGGCTTCGACGACTCCTCCACCGCGCGGGCGCGGCTCGAGCTTGACGCGGACGGCCGGCCGGTCGCC
ACGATCCACAGTGCGTGTGCCGAGGTCGGGCAGGGGTTCGTCACGGTCGCCGGGCAGATCGCGCGGACCGAGCTCGGTGT
CGACGAGGTCGTGCTGCGCCCCGCCGACACCGGGGTGGGCAGCGCCGGGTCGACGAGCGCGTCCCGCCAGACGTGGATGA
GTGGCGGCGCCGTGCGCGGTGCGTGCGTGGCGGTGGTCGACCGGCTGCTGGCCCGGGTGGCGCGTCGGCTGGGCCTGCCG
CCGGAGGTTGTCGAGGCGCCCCGGCGCGCCCTGGTGATCACCGGGGGCGAGATCGTCGGCGCCGAGACGGGGACCCGGCT
CACGCTGGCCGAGGCGCTCGCCGAGGGACCGGTCGAAGCCGAGCACACCTTCCACCACCGGCGCACGACCGCCCTGGACG
CGCACGGCCAGGGTGATCCGCACGTGGCCTTCGCCGCGGCGGCGCACCGGGCCGTGGTGGACGTCGACCTCGACCTCGGG
CTCGTCCGCGTCGTGTCGATGGCGCTCGCGCAGGACTGCGGCACCGTGCTGAACCCGCTGTCGCTGCGCGGGCAGGTCGA
GGGTGGCACCGCCCAGGGGCTCGGCCTGGCCGTGATGGAGGAGCTGGTGACCGTGGACGGCGTGGTGACCAACCCGACGC
TGCACGACTACCTGCTGCCCACCGCGGCGGACGTCCCCGCGCTGGACTTCGTGGCGCTCACCTACCCGCAGCCGGACGCG
CCTTACGGGGTGAAGGGCGTCGGGGAGACCCCGACCTGCACGGCGACCGCCGCGGTCCTCGCCGCCGTCCGGGCAGCGGT
CGGGCGGGACCTGCGCCGGGTACCGGTCCGCCCGGTGGACCTAGTCGATCTCGCGGATCCGGTCGATCCGCTGGGCGGTG
CTCCGTATCTGGGGAATAAGGCAGCCCGGGGAGATGGAACGCGGATGAGCGGATGA

Upstream 100 bases:

>100_bases
TTCAGGAGACACTGGCGGGCAACATCTGCCGGTGCACCGGGTACGGCCGCATCCTCGCGGCGGTCCGCGCCGTCCAGGCG
GGGCGGGGCGGCCCGCCCGG

Downstream 100 bases:

>100_bases
GTGGTGGGCAGGCCGGTGCCGCGACGCCGCCGGACGCCGTCGAGGTGATCCGGTCGCGTCGGGTCGTACTGCCCGACGGC
GAGCGCCCCGCGGCCGTCCA

Product: molybdopterin binding aldehyde oxidase and xanthine dehydrogenase

Products: NA

Alternate protein names: XDHase subunit D [H]

Number of amino acids: Translated: 791; Mature: 790

Protein sequence:

>791_residues
MGMTGRARGVGGSVLRPDGSAKAGGTFVYAGDLSAPGMLHARTLRSPHPRARIRRVDTAAALRIPGVAAVVTAVDVPGVA
TYGLIVADQPVFAATETRYAGEPVAAVAAVDAPTARRALAAVEVEYEPLPPLVDPEVAAGPGAEPLHPDGNVFREITLRH
GDPDAAGPVVVEDSYLVGMQDQAFLAPEAALVVPAADGGVDMWLATQWLHSDREQIAACLGLPEELVRLELAGVGGAFGG
REDVTLQVHGALLARATGTPVRIAYDRVESFLGHPHRHPARMWFRHTATAAGDLVSVHARIIMDGGAYASSSPAVIANAV
THAAGPYRVPNARLDGLVVRTNNPPCGAMRGFGVPQVTIGHEAQMDRLADRLRMDPVELRVRNALRPGDVLPTGQVLGPP
LPAREAIEAVAARPLPAALTAASPVTARPGGRGAHADLARVRRGVGYALAYKNLLFSEGFDDSSTARARLELDADGRPVA
TIHSACAEVGQGFVTVAGQIARTELGVDEVVLRPADTGVGSAGSTSASRQTWMSGGAVRGACVAVVDRLLARVARRLGLP
PEVVEAPRRALVITGGEIVGAETGTRLTLAEALAEGPVEAEHTFHHRRTTALDAHGQGDPHVAFAAAAHRAVVDVDLDLG
LVRVVSMALAQDCGTVLNPLSLRGQVEGGTAQGLGLAVMEELVTVDGVVTNPTLHDYLLPTAADVPALDFVALTYPQPDA
PYGVKGVGETPTCTATAAVLAAVRAAVGRDLRRVPVRPVDLVDLADPVDPLGGAPYLGNKAARGDGTRMSG

Sequences:

>Translated_791_residues
MGMTGRARGVGGSVLRPDGSAKAGGTFVYAGDLSAPGMLHARTLRSPHPRARIRRVDTAAALRIPGVAAVVTAVDVPGVA
TYGLIVADQPVFAATETRYAGEPVAAVAAVDAPTARRALAAVEVEYEPLPPLVDPEVAAGPGAEPLHPDGNVFREITLRH
GDPDAAGPVVVEDSYLVGMQDQAFLAPEAALVVPAADGGVDMWLATQWLHSDREQIAACLGLPEELVRLELAGVGGAFGG
REDVTLQVHGALLARATGTPVRIAYDRVESFLGHPHRHPARMWFRHTATAAGDLVSVHARIIMDGGAYASSSPAVIANAV
THAAGPYRVPNARLDGLVVRTNNPPCGAMRGFGVPQVTIGHEAQMDRLADRLRMDPVELRVRNALRPGDVLPTGQVLGPP
LPAREAIEAVAARPLPAALTAASPVTARPGGRGAHADLARVRRGVGYALAYKNLLFSEGFDDSSTARARLELDADGRPVA
TIHSACAEVGQGFVTVAGQIARTELGVDEVVLRPADTGVGSAGSTSASRQTWMSGGAVRGACVAVVDRLLARVARRLGLP
PEVVEAPRRALVITGGEIVGAETGTRLTLAEALAEGPVEAEHTFHHRRTTALDAHGQGDPHVAFAAAAHRAVVDVDLDLG
LVRVVSMALAQDCGTVLNPLSLRGQVEGGTAQGLGLAVMEELVTVDGVVTNPTLHDYLLPTAADVPALDFVALTYPQPDA
PYGVKGVGETPTCTATAAVLAAVRAAVGRDLRRVPVRPVDLVDLADPVDPLGGAPYLGNKAARGDGTRMSG
>Mature_790_residues
GMTGRARGVGGSVLRPDGSAKAGGTFVYAGDLSAPGMLHARTLRSPHPRARIRRVDTAAALRIPGVAAVVTAVDVPGVAT
YGLIVADQPVFAATETRYAGEPVAAVAAVDAPTARRALAAVEVEYEPLPPLVDPEVAAGPGAEPLHPDGNVFREITLRHG
DPDAAGPVVVEDSYLVGMQDQAFLAPEAALVVPAADGGVDMWLATQWLHSDREQIAACLGLPEELVRLELAGVGGAFGGR
EDVTLQVHGALLARATGTPVRIAYDRVESFLGHPHRHPARMWFRHTATAAGDLVSVHARIIMDGGAYASSSPAVIANAVT
HAAGPYRVPNARLDGLVVRTNNPPCGAMRGFGVPQVTIGHEAQMDRLADRLRMDPVELRVRNALRPGDVLPTGQVLGPPL
PAREAIEAVAARPLPAALTAASPVTARPGGRGAHADLARVRRGVGYALAYKNLLFSEGFDDSSTARARLELDADGRPVAT
IHSACAEVGQGFVTVAGQIARTELGVDEVVLRPADTGVGSAGSTSASRQTWMSGGAVRGACVAVVDRLLARVARRLGLPP
EVVEAPRRALVITGGEIVGAETGTRLTLAEALAEGPVEAEHTFHHRRTTALDAHGQGDPHVAFAAAAHRAVVDVDLDLGL
VRVVSMALAQDCGTVLNPLSLRGQVEGGTAQGLGLAVMEELVTVDGVVTNPTLHDYLLPTAADVPALDFVALTYPQPDAP
YGVKGVGETPTCTATAAVLAAVRAAVGRDLRRVPVRPVDLVDLADPVDPLGGAPYLGNKAARGDGTRMSG

Specific function: Oxidizes hypoxanthine and xanthine to uric acid [H]

COG id: COG1529

COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the xanthine dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI91823271, Length=742, Percent_Identity=26.5498652291105, Blast_Score=193, Evalue=5e-49,
Organism=Homo sapiens, GI71773480, Length=755, Percent_Identity=25.1655629139073, Blast_Score=172, Evalue=1e-42,
Organism=Escherichia coli, GI1789230, Length=778, Percent_Identity=29.1773778920308, Blast_Score=246, Evalue=4e-66,
Organism=Escherichia coli, GI1789246, Length=790, Percent_Identity=25.8227848101266, Blast_Score=163, Evalue=3e-41,
Organism=Escherichia coli, GI1786478, Length=776, Percent_Identity=26.6752577319588, Blast_Score=122, Evalue=1e-28,
Organism=Caenorhabditis elegans, GI17540638, Length=747, Percent_Identity=25.9705488621151, Blast_Score=204, Evalue=1e-52,
Organism=Caenorhabditis elegans, GI17539860, Length=752, Percent_Identity=22.8723404255319, Blast_Score=110, Evalue=4e-24,
Organism=Drosophila melanogaster, GI17737937, Length=746, Percent_Identity=27.6139410187668, Blast_Score=171, Evalue=1e-42,
Organism=Drosophila melanogaster, GI24647201, Length=760, Percent_Identity=24.0789473684211, Blast_Score=129, Evalue=6e-30,
Organism=Drosophila melanogaster, GI24647193, Length=792, Percent_Identity=24.6212121212121, Blast_Score=117, Evalue=3e-26,
Organism=Drosophila melanogaster, GI24647199, Length=766, Percent_Identity=23.3681462140992, Blast_Score=115, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000674
- InterPro:   IPR008274
- InterPro:   IPR017609 [H]

Pfam domain/function: PF01315 Ald_Xan_dh_C; PF02738 Ald_Xan_dh_C2 [H]

EC number: =1.17.1.4 [H]

Molecular weight: Translated: 81870; Mature: 81739

Theoretical pI: Translated: 6.29; Mature: 6.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGMTGRARGVGGSVLRPDGSAKAGGTFVYAGDLSAPGMLHARTLRSPHPRARIRRVDTAA
CCCCCCCCCCCCCEECCCCCCCCCCEEEEECCCCCCCCCHHHHCCCCCCHHHHHHHCHHH
ALRIPGVAAVVTAVDVPGVATYGLIVADQPVFAATETRYAGEPVAAVAAVDAPTARRALA
HEECCCCEEEHHHHCCCCCCEEEEEEECCCCEEECCCCCCCCCEEEEEECCCCHHHHEEE
AVEVEYEPLPPLVDPEVAAGPGAEPLHPDGNVFREITLRHGDPDAAGPVVVEDSYLVGMQ
EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEECCEEECCC
DQAFLAPEAALVVPAADGGVDMWLATQWLHSDREQIAACLGLPEELVRLELAGVGGAFGG
CCCEECCCCEEEEECCCCCCCHHHHHHHHHCCHHHHHHHHCCHHHHHEEEEECCCCCCCC
REDVTLQVHGALLARATGTPVRIAYDRVESFLGHPHRHPARMWFRHTATAAGDLVSVHAR
CCCEEEEEECEEEEECCCCCEEEEHHHHHHHHCCCCCCHHHHHHHHHHHHHCHHHEEEEE
IIMDGGAYASSSPAVIANAVTHAAGPYRVPNARLDGLVVRTNNPPCGAMRGFGVPQVTIG
EEECCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEC
HEAQMDRLADRLRMDPVELRVRNALRPGDVLPTGQVLGPPLPAREAIEAVAARPLPAALT
CHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHH
AASPVTARPGGRGAHADLARVRRGVGYALAYKNLLFSEGFDDSSTARARLELDADGRPVA
CCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHH
TIHSACAEVGQGFVTVAGQIARTELGVDEVVLRPADTGVGSAGSTSASRQTWMSGGAVRG
HHHHHHHHHCCCEEEEHHHHHHHHCCCCCEEEECCCCCCCCCCCCCHHHHHHHCCCCCHH
ACVAVVDRLLARVARRLGLPPEVVEAPRRALVITGGEIVGAETGTRLTLAEALAEGPVEA
HHHHHHHHHHHHHHHHCCCCHHHHHCCCEEEEEECCEEECCCCCCEEHHHHHHHCCCCCH
EHTFHHRRTTALDAHGQGDPHVAFAAAAHRAVVDVDLDLGLVRVVSMALAQDCGTVLNPL
HHHHHHHHCEEECCCCCCCCCEEEEEHHCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCH
SLRGQVEGGTAQGLGLAVMEELVTVDGVVTNPTLHDYLLPTAADVPALDFVALTYPQPDA
HHCEEECCCCCCCHHHHHHHHHHHHCCEEECCCHHHHHCCCCCCCCCEEEEEEECCCCCC
PYGVKGVGETPTCTATAAVLAAVRAAVGRDLRRVPVRPVDLVDLADPVDPLGGAPYLGNK
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCC
AARGDGTRMSG
CCCCCCCCCCC
>Mature Secondary Structure 
GMTGRARGVGGSVLRPDGSAKAGGTFVYAGDLSAPGMLHARTLRSPHPRARIRRVDTAA
CCCCCCCCCCCCEECCCCCCCCCCEEEEECCCCCCCCCHHHHCCCCCCHHHHHHHCHHH
ALRIPGVAAVVTAVDVPGVATYGLIVADQPVFAATETRYAGEPVAAVAAVDAPTARRALA
HEECCCCEEEHHHHCCCCCCEEEEEEECCCCEEECCCCCCCCCEEEEEECCCCHHHHEEE
AVEVEYEPLPPLVDPEVAAGPGAEPLHPDGNVFREITLRHGDPDAAGPVVVEDSYLVGMQ
EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEECCEEECCC
DQAFLAPEAALVVPAADGGVDMWLATQWLHSDREQIAACLGLPEELVRLELAGVGGAFGG
CCCEECCCCEEEEECCCCCCCHHHHHHHHHCCHHHHHHHHCCHHHHHEEEEECCCCCCCC
REDVTLQVHGALLARATGTPVRIAYDRVESFLGHPHRHPARMWFRHTATAAGDLVSVHAR
CCCEEEEEECEEEEECCCCCEEEEHHHHHHHHCCCCCCHHHHHHHHHHHHHCHHHEEEEE
IIMDGGAYASSSPAVIANAVTHAAGPYRVPNARLDGLVVRTNNPPCGAMRGFGVPQVTIG
EEECCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEC
HEAQMDRLADRLRMDPVELRVRNALRPGDVLPTGQVLGPPLPAREAIEAVAARPLPAALT
CHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHH
AASPVTARPGGRGAHADLARVRRGVGYALAYKNLLFSEGFDDSSTARARLELDADGRPVA
CCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHH
TIHSACAEVGQGFVTVAGQIARTELGVDEVVLRPADTGVGSAGSTSASRQTWMSGGAVRG
HHHHHHHHHCCCEEEEHHHHHHHHCCCCCEEEECCCCCCCCCCCCCHHHHHHHCCCCCHH
ACVAVVDRLLARVARRLGLPPEVVEAPRRALVITGGEIVGAETGTRLTLAEALAEGPVEA
HHHHHHHHHHHHHHHHCCCCHHHHHCCCEEEEEECCEEECCCCCCEEHHHHHHHCCCCCH
EHTFHHRRTTALDAHGQGDPHVAFAAAAHRAVVDVDLDLGLVRVVSMALAQDCGTVLNPL
HHHHHHHHCEEECCCCCCCCCEEEEEHHCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCH
SLRGQVEGGTAQGLGLAVMEELVTVDGVVTNPTLHDYLLPTAADVPALDFVALTYPQPDA
HHCEEECCCCCCCHHHHHHHHHHHHCCEEECCCHHHHHCCCCCCCCCEEEEEEECCCCCC
PYGVKGVGETPTCTATAAVLAAVRAAVGRDLRRVPVRPVDLVDLADPVDPLGGAPYLGNK
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCC
AARGDGTRMSG
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 11344136 [H]