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The map label for this gene is alc [H]

Identifier: 158317428

GI number: 158317428

Start: 6895279

End: 6896841

Strand: Reverse

Name: alc [H]

Synonym: Franean1_5680

Alternate gene names: 158317428

Gene position: 6896841-6895279 (Counterclockwise)

Preceding gene: 158317429

Following gene: 158317427

Centisome position: 76.78

GC content: 75.11

Gene sequence:

>1563_bases
ATGACCGACGCGCCCGACCTGACGAACCTCGTCGACCTCGCCGCCGCCCGGTTCGGTGGGTCCGTCGTCGCCGTCAATGA
CGAGTTCTTCGCGCTCGCCGAGCGCATGCTCCTGGCGGAGGCACCGATAGTCCGTCCGGGGGTGTTCACCGAGCGCGGCC
AGTGGACCGACGGCTGGGAGACCCGCCGCCGCCGCGACCTGCCCGCGGCGGACTGGGCGATCGTCCGCCTCGGCGCCCCC
GGCATCGTGCACGCGGTGACCGTGGACACGACCCATTTCACCGGCAACGCCCCGGAGTCGGTCGAGCTGCACGGCGCCAC
CCTTGCCGGCTACCCGTCCGCCGAGGATGTCGCCGAGGACTCGGTCACCTGGGTGCCCCTCGTCGCCCGCACGCCAGTCG
CCGCGGACGCCGTCAACGTCCTGCCCGTGTCGGCGGAGGGCCGGCTCCGGATCAGTCACCTGCGGCTGACCATCCACCCG
GACGGGGGAGTCGCCCGGCTGCGGGTGCACGGCGTCGTCGTGCCCGACCCGCGGCTGCTCGACCGGGTCACCTCCGACCT
GGCCGCCGCCTACCTGGGCGGTGTCGTCGTCGCCGCCAGCGACATGCACTACGGCGACCGGCACAACCTGAACGCCTCCG
GCGACGCCCGGGCGATGGGGGAGGGCTGGGAGACCCGCCGCCGCCGCGGGCCGGGGCACGACTGGGCGGTGGTGCGGCTG
GCCACCGAGGGGACCGTGGTGCGGGCCGAGGTCGACACCCGCCACTTCCGCGGCAACGCGCCGCGCGCCGTCGCGCTGTG
GGCGGCGAACGCACCCACGACCGGCGACGACGACCTGGCCACGGACGCCCTGTCGGCGATCACCGACTGGCGGCCGCTGC
TGCCGCGCACCCGGGTCCAGCCGAACACCCGGCACCTGTTCGACCTGGAGGTGCCGGTCGAGGCCACGCACGTGCGGGTG
GACGCGATCCCGGACGGCGGTCTCGCCCGGCTGCGGCTGGTCGGCGCGCCGACCGAGGCGGGACGCGAGTCGCTGGCCAT
GCGCTGGTTCGACTCCCTGACGCCCGCCGCGGCCCGTGAGGAGCTGCTGGCCTGCTGCGGTTCCGAGGACTGGGCGGACG
CCGTCACGGCCCTCCGGCCCTTCGACACGCTCGCCACGCTGCTGCCCGCCGCCGAGCAGGAGTGGTGGAACCTGCCCGAA
ACCGCCTGGCTGGAGGCGTTCACCGCGCATCCCCGGATCGGGGAGCGCCCGACACCCGCGCCGACGCCGCCGACGTCCTC
GCGGGCCACCGTCGTCTCCCTCGACGCCCCCCGACGGGAGCAGGCCGCCCTGGACCAGGCGAGCGAGGATGTCCGCGCGG
CCTTCGCCGAGGGGAACGCCGAGTACGAGGACCGCTTCGGGTTCATCTTCCTCGTTCGCGCGGCGGGGCGTGGCGCGCAG
GAGATGCTGGAGCTGCTCCGGGAGAGGATGGCGAACGACCCCAGGACCGAGCTGCGGGTGGCGGCCGGCCAGCAGGCGGA
GATCACCGCGCTGCGGCTGCGCCATCTGATCACCGGCGCCTGA

Upstream 100 bases:

>100_bases
CCCACCAGCCACGCCCCAGCCCGTCCCGGCGCTCAGCCCGTTTCCGGCCGCCCGCACCGTCCGCCCGCCCCGTCCGCCCG
AGCAGAAGGAGCCCGCACGC

Downstream 100 bases:

>100_bases
CACCTGGTTCCCGGGTCGTGGCGAAGCGACGAGTGGGTCGCCGGCGGGCACCCCGGCGGCGAGCCGGGGAGGGCGACGCG
AGTGAGCTTGTCGACCCATG

Product: putative bifunctional allantoicase/OHCU decarboxylase

Products: NA

Alternate protein names: Allantoate amidinohydrolase [H]

Number of amino acids: Translated: 520; Mature: 519

Protein sequence:

>520_residues
MTDAPDLTNLVDLAAARFGGSVVAVNDEFFALAERMLLAEAPIVRPGVFTERGQWTDGWETRRRRDLPAADWAIVRLGAP
GIVHAVTVDTTHFTGNAPESVELHGATLAGYPSAEDVAEDSVTWVPLVARTPVAADAVNVLPVSAEGRLRISHLRLTIHP
DGGVARLRVHGVVVPDPRLLDRVTSDLAAAYLGGVVVAASDMHYGDRHNLNASGDARAMGEGWETRRRRGPGHDWAVVRL
ATEGTVVRAEVDTRHFRGNAPRAVALWAANAPTTGDDDLATDALSAITDWRPLLPRTRVQPNTRHLFDLEVPVEATHVRV
DAIPDGGLARLRLVGAPTEAGRESLAMRWFDSLTPAAAREELLACCGSEDWADAVTALRPFDTLATLLPAAEQEWWNLPE
TAWLEAFTAHPRIGERPTPAPTPPTSSRATVVSLDAPRREQAALDQASEDVRAAFAEGNAEYEDRFGFIFLVRAAGRGAQ
EMLELLRERMANDPRTELRVAAGQQAEITALRLRHLITGA

Sequences:

>Translated_520_residues
MTDAPDLTNLVDLAAARFGGSVVAVNDEFFALAERMLLAEAPIVRPGVFTERGQWTDGWETRRRRDLPAADWAIVRLGAP
GIVHAVTVDTTHFTGNAPESVELHGATLAGYPSAEDVAEDSVTWVPLVARTPVAADAVNVLPVSAEGRLRISHLRLTIHP
DGGVARLRVHGVVVPDPRLLDRVTSDLAAAYLGGVVVAASDMHYGDRHNLNASGDARAMGEGWETRRRRGPGHDWAVVRL
ATEGTVVRAEVDTRHFRGNAPRAVALWAANAPTTGDDDLATDALSAITDWRPLLPRTRVQPNTRHLFDLEVPVEATHVRV
DAIPDGGLARLRLVGAPTEAGRESLAMRWFDSLTPAAAREELLACCGSEDWADAVTALRPFDTLATLLPAAEQEWWNLPE
TAWLEAFTAHPRIGERPTPAPTPPTSSRATVVSLDAPRREQAALDQASEDVRAAFAEGNAEYEDRFGFIFLVRAAGRGAQ
EMLELLRERMANDPRTELRVAAGQQAEITALRLRHLITGA
>Mature_519_residues
TDAPDLTNLVDLAAARFGGSVVAVNDEFFALAERMLLAEAPIVRPGVFTERGQWTDGWETRRRRDLPAADWAIVRLGAPG
IVHAVTVDTTHFTGNAPESVELHGATLAGYPSAEDVAEDSVTWVPLVARTPVAADAVNVLPVSAEGRLRISHLRLTIHPD
GGVARLRVHGVVVPDPRLLDRVTSDLAAAYLGGVVVAASDMHYGDRHNLNASGDARAMGEGWETRRRRGPGHDWAVVRLA
TEGTVVRAEVDTRHFRGNAPRAVALWAANAPTTGDDDLATDALSAITDWRPLLPRTRVQPNTRHLFDLEVPVEATHVRVD
AIPDGGLARLRLVGAPTEAGRESLAMRWFDSLTPAAAREELLACCGSEDWADAVTALRPFDTLATLLPAAEQEWWNLPET
AWLEAFTAHPRIGERPTPAPTPPTSSRATVVSLDAPRREQAALDQASEDVRAAFAEGNAEYEDRFGFIFLVRAAGRGAQE
MLELLRERMANDPRTELRVAAGQQAEITALRLRHLITGA

Specific function: Unknown

COG id: COG4266

COG function: function code F; Allantoicase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the allantoicase family [H]

Homologues:

Organism=Homo sapiens, GI144953901, Length=371, Percent_Identity=35.3099730458221, Blast_Score=215, Evalue=9e-56,
Organism=Saccharomyces cerevisiae, GI6322220, Length=332, Percent_Identity=33.7349397590361, Blast_Score=196, Evalue=6e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005164
- InterPro:   IPR015908
- InterPro:   IPR008979 [H]

Pfam domain/function: PF03561 Allantoicase [H]

EC number: =3.5.3.4 [H]

Molecular weight: Translated: 56357; Mature: 56226

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDAPDLTNLVDLAAARFGGSVVAVNDEFFALAERMLLAEAPIVRPGVFTERGQWTDGWE
CCCCCCHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHH
TRRRRDLPAADWAIVRLGAPGIVHAVTVDTTHFTGNAPESVELHGATLAGYPSAEDVAED
HHHHCCCCCCCEEEEEECCCCEEEEEEEEEEEECCCCCCCEEEECEEEECCCCHHHHHCC
SVTWVPLVARTPVAADAVNVLPVSAEGRLRISHLRLTIHPDGGVARLRVHGVVVPDPRLL
CCEEEEEEECCCCCCCCEEEEEECCCCCEEEEEEEEEECCCCCEEEEEEEEEECCCHHHH
DRVTSDLAAAYLGGVVVAASDMHYGDRHNLNASGDARAMGEGWETRRRRGPGHDWAVVRL
HHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEEE
ATEGTVVRAEVDTRHFRGNAPRAVALWAANAPTTGDDDLATDALSAITDWRPLLPRTRVQ
ECCCEEEEEECCHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCHHCCCCCCCC
PNTRHLFDLEVPVEATHVRVDAIPDGGLARLRLVGAPTEAGRESLAMRWFDSLTPAAARE
CCCCEEEEEECCCEEEEEEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCHHHHH
ELLACCGSEDWADAVTALRPFDTLATLLPAAEQEWWNLPETAWLEAFTAHPRIGERPTPA
HHHHHCCCCHHHHHHHHHCCHHHHHHHHCCCHHHHCCCCHHHHHHHHHCCCCCCCCCCCC
PTPPTSSRATVVSLDAPRREQAALDQASEDVRAAFAEGNAEYEDRFGFIFLVRAAGRGAQ
CCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCHHHCCCEEEEEEECCCCHH
EMLELLRERMANDPRTELRVAAGQQAEITALRLRHLITGA
HHHHHHHHHHCCCCCHHEEEECCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
TDAPDLTNLVDLAAARFGGSVVAVNDEFFALAERMLLAEAPIVRPGVFTERGQWTDGWE
CCCCCHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHH
TRRRRDLPAADWAIVRLGAPGIVHAVTVDTTHFTGNAPESVELHGATLAGYPSAEDVAED
HHHHCCCCCCCEEEEEECCCCEEEEEEEEEEEECCCCCCCEEEECEEEECCCCHHHHHCC
SVTWVPLVARTPVAADAVNVLPVSAEGRLRISHLRLTIHPDGGVARLRVHGVVVPDPRLL
CCEEEEEEECCCCCCCCEEEEEECCCCCEEEEEEEEEECCCCCEEEEEEEEEECCCHHHH
DRVTSDLAAAYLGGVVVAASDMHYGDRHNLNASGDARAMGEGWETRRRRGPGHDWAVVRL
HHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEEE
ATEGTVVRAEVDTRHFRGNAPRAVALWAANAPTTGDDDLATDALSAITDWRPLLPRTRVQ
ECCCEEEEEECCHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCHHCCCCCCCC
PNTRHLFDLEVPVEATHVRVDAIPDGGLARLRLVGAPTEAGRESLAMRWFDSLTPAAARE
CCCCEEEEEECCCEEEEEEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCHHHHH
ELLACCGSEDWADAVTALRPFDTLATLLPAAEQEWWNLPETAWLEAFTAHPRIGERPTPA
HHHHHCCCCHHHHHHHHHCCHHHHHHHHCCCHHHHCCCCHHHHHHHHHCCCCCCCCCCCC
PTPPTSSRATVVSLDAPRREQAALDQASEDVRAAFAEGNAEYEDRFGFIFLVRAAGRGAQ
CCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCHHHCCCEEEEEEECCCCHH
EMLELLRERMANDPRTELRVAAGQQAEITALRLRHLITGA
HHHHHHHHHHCCCCCHHEEEECCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA