| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317396
Identifier: 158317396
GI number: 158317396
Start: 6860506
End: 6860967
Strand: Reverse
Name: 158317396
Synonym: Franean1_5647
Alternate gene names: NA
Gene position: 6860967-6860506 (Counterclockwise)
Preceding gene: 158317401
Following gene: 158317393
Centisome position: 76.39
GC content: 71.21
Gene sequence:
>462_bases GTGGCGCGGTTGAGAGTGGCGGCGGTCGGTGTTTTCGGCATCGCCCTCGGGGGGATGTTGATGCATGCCGTCCCGATGCC GTCGGCATGGGTGTGGTTGGTCGCAATGATCTTCGTCGTCGTCCTGGGGGTCAACATCACTGCCTGGCTTGTGGTCCCGC GGGTCATCGGATCCGTCGTCGCGTCCATCCGTCCGCTTCCGGCCGGCCGGGGCTCGTTCGACCGCGACCGCGACGCGGAG TGGTCGTCGTCCTCGGAGTGGCAGCCGGAGGCGTGGTCGTCGAGCTGGGACTACGCCGGCGGGGACGGCCCCGACGCGGG TGACGGCGACGGTGACGGTGCCGACGAGGACTGGTCCGTCGGACGTCCCGGCAGCGGGCAGGGGCGCCGGCGCGTGCGCG GGCATGACGGCTCCTCGTCGACCGGCGGCGCCTCGTACGGCTTCGGTGTGTTCAGCTGGTGA
Upstream 100 bases:
>100_bases GGTCCGTAGTGCCGCTGACCTGCGGCGCCGTCTCTCGGTGGCACTGTCGGCTTGGCGTCGATCCACCCCACCGGCCCCGT CCGAGGCGTAGGAAGGCATC
Downstream 100 bases:
>100_bases GCCGCCAGTCCAGCTGGTGAGGCGGGCCCAGTTGGTGAGGCGGCCTCGGCGCGCCGGCCCAGCGGCGGAGTCAGCCCAGC AGGTGGCGCCGGTGGCGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 153; Mature: 152
Protein sequence:
>153_residues MARLRVAAVGVFGIALGGMLMHAVPMPSAWVWLVAMIFVVVLGVNITAWLVVPRVIGSVVASIRPLPAGRGSFDRDRDAE WSSSSEWQPEAWSSSWDYAGGDGPDAGDGDGDGADEDWSVGRPGSGQGRRRVRGHDGSSSTGGASYGFGVFSW
Sequences:
>Translated_153_residues MARLRVAAVGVFGIALGGMLMHAVPMPSAWVWLVAMIFVVVLGVNITAWLVVPRVIGSVVASIRPLPAGRGSFDRDRDAE WSSSSEWQPEAWSSSWDYAGGDGPDAGDGDGDGADEDWSVGRPGSGQGRRRVRGHDGSSSTGGASYGFGVFSW >Mature_152_residues ARLRVAAVGVFGIALGGMLMHAVPMPSAWVWLVAMIFVVVLGVNITAWLVVPRVIGSVVASIRPLPAGRGSFDRDRDAEW SSSSEWQPEAWSSSWDYAGGDGPDAGDGDGDGADEDWSVGRPGSGQGRRRVRGHDGSSSTGGASYGFGVFSW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16081; Mature: 15950
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARLRVAAVGVFGIALGGMLMHAVPMPSAWVWLVAMIFVVVLGVNITAWLVVPRVIGSVV CCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH ASIRPLPAGRGSFDRDRDAEWSSSSEWQPEAWSSSWDYAGGDGPDAGDGDGDGADEDWSV HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GRPGSGQGRRRVRGHDGSSSTGGASYGFGVFSW CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure ARLRVAAVGVFGIALGGMLMHAVPMPSAWVWLVAMIFVVVLGVNITAWLVVPRVIGSVV CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH ASIRPLPAGRGSFDRDRDAEWSSSSEWQPEAWSSSWDYAGGDGPDAGDGDGDGADEDWSV HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GRPGSGQGRRRVRGHDGSSSTGGASYGFGVFSW CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA