| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is 158317369
Identifier: 158317369
GI number: 158317369
Start: 6834412
End: 6834711
Strand: Reverse
Name: 158317369
Synonym: Franean1_5620
Alternate gene names: NA
Gene position: 6834711-6834412 (Counterclockwise)
Preceding gene: 158317370
Following gene: 158317368
Centisome position: 76.09
GC content: 71.67
Gene sequence:
>300_bases ATGGCTCGTGACTTCGACGCTCGGCGAAGCACGGATGTCGAGGAGGACGAGCTCCAGGAGCAGAGCCTGGAGACACTGAA GGCGCAGCGCGCCGGAGCGGCGGCCGACCTCGGCGACGACATGGACGCGCTCGAGGCGGAGCTGGACCTGCCCGACGCCG AGGTCAGGGACGAGGAGCTCGCGCTGCGGGTGCTGCCCCGGCAGGCGGACGAGTTCACCTGCACGAGCTGCTTCCTGGTA CAGCACCGCAGCCAGCTCGCCGACCCACGCCGGGCGGTGTGCGCGGACTGCGCGGCCTGA
Upstream 100 bases:
>100_bases GATGTCGTTCGGGTACCGCACATGGTCGATCCGGTGGTCAGGGTCGGCGCCGGTGTCGACAGGCCGCGGTCTGTGAGGAC GAGGAAAGGTAAGGAGACGC
Downstream 100 bases:
>100_bases CACGCGCGCGGCCCCGGGCAGGCAAGCATGAGCGATGGACGTCCATCGCATGACGCCGGACGGGCGGTTCCGGGAGCGAG GCCCTTGCCAGGCCCGCCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 99; Mature: 98
Protein sequence:
>99_residues MARDFDARRSTDVEEDELQEQSLETLKAQRAGAAADLGDDMDALEAELDLPDAEVRDEELALRVLPRQADEFTCTSCFLV QHRSQLADPRRAVCADCAA
Sequences:
>Translated_99_residues MARDFDARRSTDVEEDELQEQSLETLKAQRAGAAADLGDDMDALEAELDLPDAEVRDEELALRVLPRQADEFTCTSCFLV QHRSQLADPRRAVCADCAA >Mature_98_residues ARDFDARRSTDVEEDELQEQSLETLKAQRAGAAADLGDDMDALEAELDLPDAEVRDEELALRVLPRQADEFTCTSCFLVQ HRSQLADPRRAVCADCAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10982; Mature: 10851
Theoretical pI: Translated: 3.97; Mature: 3.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARDFDARRSTDVEEDELQEQSLETLKAQRAGAAADLGDDMDALEAELDLPDAEVRDEEL CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCHHHH ALRVLPRQADEFTCTSCFLVQHRSQLADPRRAVCADCAA HHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCC >Mature Secondary Structure ARDFDARRSTDVEEDELQEQSLETLKAQRAGAAADLGDDMDALEAELDLPDAEVRDEEL CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCHHHH ALRVLPRQADEFTCTSCFLVQHRSQLADPRRAVCADCAA HHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA