| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is 158317368
Identifier: 158317368
GI number: 158317368
Start: 6833806
End: 6834327
Strand: Reverse
Name: 158317368
Synonym: Franean1_5619
Alternate gene names: NA
Gene position: 6834327-6833806 (Counterclockwise)
Preceding gene: 158317369
Following gene: 158317367
Centisome position: 76.09
GC content: 71.65
Gene sequence:
>522_bases TTGCCAGGCCCGCCCCCGGAGCCGTCCGCACGCCGGATGGGTGTGGTCGCGGCCGCGATCCTGGCCGGGTGCCTGACGGC CTACTACGCCCTGCCCGTCTACGGCCACGGCGGCGGGCGATGGTTCTCGCTGCGGGTGGGGCTGTTCGCCCTCGGCCTGA TCCTGACCGGATGCCTGCTCGCCAGGCAGGTGGTCTTCGCTCGGCACGTCTCTGTCGCCCAGGTCCGCGCGCAGTGGCTG TTCGCCGGGATCTGCGTCACCGTCGTACTGTTCGCCACCGCCTACTACGCGCTGGCGGTCGGTGCGACCGCCCAGATCTC CGGCGTCCGGACGAAGACCGACGCGCTCTATTTCGCCGTCACCGTGCTGACCACGGTCGGCTTCGGGGACATCCACGCCA CGGGTCAGGCTGCCCGGGTCGTCGTCATCGTCCAGATGGGGTTCGATGTCCTTTTCGTGGCGACCGCGGCCTCGGCGCTG CGCGCGTCGAGTTCGGCTCGCCGGGCGGCGCGCGCGTCCTGA
Upstream 100 bases:
>100_bases GGACTGCGCGGCCTGACACGCGCGCGGCCCCGGGCAGGCAAGCATGAGCGATGGACGTCCATCGCATGACGCCGGACGGG CGGTTCCGGGAGCGAGGCCC
Downstream 100 bases:
>100_bases GAGCGGCGCGGACTTCTTTCCGACACCACTCTCGCGCCCGGTTGCCGGTGGCCTGGAGTAGCTGTACCACTACCCTGAGT TTGGGAAGTGGGGGTGAGCG
Product: Ion transport 2 domain-containing protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 173; Mature: 172
Protein sequence:
>173_residues MPGPPPEPSARRMGVVAAAILAGCLTAYYALPVYGHGGGRWFSLRVGLFALGLILTGCLLARQVVFARHVSVAQVRAQWL FAGICVTVVLFATAYYALAVGATAQISGVRTKTDALYFAVTVLTTVGFGDIHATGQAARVVVIVQMGFDVLFVATAASAL RASSSARRAARAS
Sequences:
>Translated_173_residues MPGPPPEPSARRMGVVAAAILAGCLTAYYALPVYGHGGGRWFSLRVGLFALGLILTGCLLARQVVFARHVSVAQVRAQWL FAGICVTVVLFATAYYALAVGATAQISGVRTKTDALYFAVTVLTTVGFGDIHATGQAARVVVIVQMGFDVLFVATAASAL RASSSARRAARAS >Mature_172_residues PGPPPEPSARRMGVVAAAILAGCLTAYYALPVYGHGGGRWFSLRVGLFALGLILTGCLLARQVVFARHVSVAQVRAQWLF AGICVTVVLFATAYYALAVGATAQISGVRTKTDALYFAVTVLTTVGFGDIHATGQAARVVVIVQMGFDVLFVATAASALR ASSSARRAARAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17988; Mature: 17857
Theoretical pI: Translated: 10.89; Mature: 10.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGPPPEPSARRMGVVAAAILAGCLTAYYALPVYGHGGGRWFSLRVGLFALGLILTGCLL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCEEECCCCEEEHHHHHHHHHHHHHHHHHH ARQVVFARHVSVAQVRAQWLFAGICVTVVLFATAYYALAVGATAQISGVRTKTDALYFAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHH TVLTTVGFGDIHATGQAARVVVIVQMGFDVLFVATAASALRASSSARRAARAS HHHHHCCCCCCCCCCCHHEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PGPPPEPSARRMGVVAAAILAGCLTAYYALPVYGHGGGRWFSLRVGLFALGLILTGCLL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCEEECCCCEEEHHHHHHHHHHHHHHHHHH ARQVVFARHVSVAQVRAQWLFAGICVTVVLFATAYYALAVGATAQISGVRTKTDALYFAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHH TVLTTVGFGDIHATGQAARVVVIVQMGFDVLFVATAASALRASSSARRAARAS HHHHHCCCCCCCCCCCHHEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA