Click here to switch to the map view.

The map label for this gene is mmgC [H]

Identifier: 158317352

GI number: 158317352

Start: 6795137

End: 6796387

Strand: Reverse

Name: mmgC [H]

Synonym: Franean1_5602

Alternate gene names: 158317352

Gene position: 6796387-6795137 (Counterclockwise)

Preceding gene: 158317353

Following gene: 158317349

Centisome position: 75.67

GC content: 75.86

Gene sequence:

>1251_bases
GTGTTCTTTGCGCTGACTGACGAGCAGCGTGCCCTGGGCGAGGCCGTCCGGGCCTTCCTCGCCGGCCGTTTCGACCTCAC
GGCGGTGCGGGCGGTGTTCGAGGACACCACCGGTGACGGGCACCCGCTGGAGCTGTGGAAGTCGGTGGGGGAGCAGGGCT
GGCTGGCCGTGTGCGTCCCGGAGGAGTTCGACGGGCTCGGCCTCGGGCTGCTGGACGCCCAGGTGGTCGCCCGTGAGCTC
GGCGCGGGGGCCGTCCCGGGGCCGTGGCTGCCGACGGTGCTGGCTGGGGAGGCCGTCCGGCTCGCCGGGTCGGACGCGCA
GCAGGCCGAGCTGCTGCCCCGCCTCGCCGACGGCGACCTCGTGGCGACGGTGGCCCTGCGGGGAGCCGGCGGGGCCTGGG
ACGCCTCCGGCGTGGCGGTCACCGCGCGCCCGGCGCCGGGCACCGTCTCCGGCATTGCCGCGGGGTCCAACGGGTTTGGG
TCCGAAGGGACCGGGGGCTCCGACGAGCCTTCGGGCTCCGGTGTGTTCGGCGGCTCCGGTGGTCTCGTCGGTGAGCTGTC
CGGGACGGCGTCGCCCGTCGAGTATCTCGGGGTCGCCGACCTCGTCGTCGTCGCGGCGATCGAGCCCGGCCCCGCCGGCG
CTGCTCCCGGAGCGGGCGAGGTGGGCCTGTACCTGCTCGACCCCGGCGCGGACGGCGTCGCCGTCCGCCCGCTGGCCGGT
CCCGACGGGACCACCCGGCTCGCCGCCCTGGAACTGGCCGGGGCGCGGGCCAGGCGGCTGCCCGGCTCGTCGGCGGCGGC
GCTCGCCGACCTCATCCGCCGCGGCGCGCTGCTCACGGCGGCGGACCAGGCCGGGGTCGCTCGCGAGGCGCTGACCAGGA
CGGTTCACTACGACCGGGAGCGGATCCAGTTCGGCCGGCCGGTCGGCTCGTTCCAGGCGCTCAAGCACCAGCTCGCCGAC
CTGCACGTCGCGGTCACGATGGCCGAGCACGCCGTGATGTACGCCGCGCACGCGCTCGACGCGGGCCTCGACGACCTGGA
GCTCGCCGTCGCCGTCGCCAAGGCGAAGGCGAGTCAGGCGGCTCGGGACGCCACCGCGGCGATGATCCAGTACCACGGCG
GCATCGGGTACACCTGGGAGCACGAGGCCCACCTGTTCTACAAGCGCGCCCGCCGGATGTACGGGGCCTTCGGTGACCCT
CCCGCCCACCTCGAGCGGGTCGCCGCGCTGACCGTCGACTCCCTGACCTGA

Upstream 100 bases:

>100_bases
GGTCGGTCACCATCTGGGGCGGCTCGTCGCAGGTGCAGCGCAACATCGTCGCCGAGCGGGTTCTCGGCCTGCCGCGCTGA
GTCCGGAAGGGACCATCGAA

Downstream 100 bases:

>100_bases
CAGCTCGGCGCTTCGCAGGCTCGCTCGATCGCCGGCTCGGGTCGGTCGGGCCTGGTCGGCCGGGCCTGGCCGGCCGGTGG
CTCAGTCGACCGGTGAGCCG

Product: acyl-CoA dehydrogenase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 416; Mature: 416

Protein sequence:

>416_residues
MFFALTDEQRALGEAVRAFLAGRFDLTAVRAVFEDTTGDGHPLELWKSVGEQGWLAVCVPEEFDGLGLGLLDAQVVAREL
GAGAVPGPWLPTVLAGEAVRLAGSDAQQAELLPRLADGDLVATVALRGAGGAWDASGVAVTARPAPGTVSGIAAGSNGFG
SEGTGGSDEPSGSGVFGGSGGLVGELSGTASPVEYLGVADLVVVAAIEPGPAGAAPGAGEVGLYLLDPGADGVAVRPLAG
PDGTTRLAALELAGARARRLPGSSAAALADLIRRGALLTAADQAGVAREALTRTVHYDRERIQFGRPVGSFQALKHQLAD
LHVAVTMAEHAVMYAAHALDAGLDDLELAVAVAKAKASQAARDATAAMIQYHGGIGYTWEHEAHLFYKRARRMYGAFGDP
PAHLERVAALTVDSLT

Sequences:

>Translated_416_residues
MFFALTDEQRALGEAVRAFLAGRFDLTAVRAVFEDTTGDGHPLELWKSVGEQGWLAVCVPEEFDGLGLGLLDAQVVAREL
GAGAVPGPWLPTVLAGEAVRLAGSDAQQAELLPRLADGDLVATVALRGAGGAWDASGVAVTARPAPGTVSGIAAGSNGFG
SEGTGGSDEPSGSGVFGGSGGLVGELSGTASPVEYLGVADLVVVAAIEPGPAGAAPGAGEVGLYLLDPGADGVAVRPLAG
PDGTTRLAALELAGARARRLPGSSAAALADLIRRGALLTAADQAGVAREALTRTVHYDRERIQFGRPVGSFQALKHQLAD
LHVAVTMAEHAVMYAAHALDAGLDDLELAVAVAKAKASQAARDATAAMIQYHGGIGYTWEHEAHLFYKRARRMYGAFGDP
PAHLERVAALTVDSLT
>Mature_416_residues
MFFALTDEQRALGEAVRAFLAGRFDLTAVRAVFEDTTGDGHPLELWKSVGEQGWLAVCVPEEFDGLGLGLLDAQVVAREL
GAGAVPGPWLPTVLAGEAVRLAGSDAQQAELLPRLADGDLVATVALRGAGGAWDASGVAVTARPAPGTVSGIAAGSNGFG
SEGTGGSDEPSGSGVFGGSGGLVGELSGTASPVEYLGVADLVVVAAIEPGPAGAAPGAGEVGLYLLDPGADGVAVRPLAG
PDGTTRLAALELAGARARRLPGSSAAALADLIRRGALLTAADQAGVAREALTRTVHYDRERIQFGRPVGSFQALKHQLAD
LHVAVTMAEHAVMYAAHALDAGLDDLELAVAVAKAKASQAARDATAAMIQYHGGIGYTWEHEAHLFYKRARRMYGAFGDP
PAHLERVAALTVDSLT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4501857, Length=395, Percent_Identity=24.3037974683544, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI4501859, Length=403, Percent_Identity=23.0769230769231, Blast_Score=74, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17506239, Length=398, Percent_Identity=24.3718592964824, Blast_Score=78, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17508101, Length=352, Percent_Identity=23.2954545454545, Blast_Score=72, Evalue=5e-13,
Organism=Drosophila melanogaster, GI24646207, Length=394, Percent_Identity=25.8883248730964, Blast_Score=68, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 42344; Mature: 42344

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFFALTDEQRALGEAVRAFLAGRFDLTAVRAVFEDTTGDGHPLELWKSVGEQGWLAVCVP
CEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCEEEECC
EEFDGLGLGLLDAQVVARELGAGAVPGPWLPTVLAGEAVRLAGSDAQQAELLPRLADGDL
CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHCCCEEEECCCCHHHHHHCCCCCCCCE
VATVALRGAGGAWDASGVAVTARPAPGTVSGIAAGSNGFGSEGTGGSDEPSGSGVFGGSG
EEEEEEECCCCCCCCCCEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEECCCC
GLVGELSGTASPVEYLGVADLVVVAAIEPGPAGAAPGAGEVGLYLLDPGADGVAVRPLAG
CEEEECCCCCCCHHHHHHHHEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCEEEEECCC
PDGTTRLAALELAGARARRLPGSSAAALADLIRRGALLTAADQAGVAREALTRTVHYDRE
CCCCCEEEHHHHHCHHHHCCCCCHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHCHH
RIQFGRPVGSFQALKHQLADLHVAVTMAEHAVMYAAHALDAGLDDLELAVAVAKAKASQA
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
ARDATAAMIQYHGGIGYTWEHEAHLFYKRARRMYGAFGDPPAHLERVAALTVDSLT
HHHHHHHHHEECCCCCEEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MFFALTDEQRALGEAVRAFLAGRFDLTAVRAVFEDTTGDGHPLELWKSVGEQGWLAVCVP
CEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCEEEECC
EEFDGLGLGLLDAQVVARELGAGAVPGPWLPTVLAGEAVRLAGSDAQQAELLPRLADGDL
CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHCCCEEEECCCCHHHHHHCCCCCCCCE
VATVALRGAGGAWDASGVAVTARPAPGTVSGIAAGSNGFGSEGTGGSDEPSGSGVFGGSG
EEEEEEECCCCCCCCCCEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEECCCC
GLVGELSGTASPVEYLGVADLVVVAAIEPGPAGAAPGAGEVGLYLLDPGADGVAVRPLAG
CEEEECCCCCCCHHHHHHHHEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCEEEEECCC
PDGTTRLAALELAGARARRLPGSSAAALADLIRRGALLTAADQAGVAREALTRTVHYDRE
CCCCCEEEHHHHHCHHHHCCCCCHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHCHH
RIQFGRPVGSFQALKHQLADLHVAVTMAEHAVMYAAHALDAGLDDLELAVAVAKAKASQA
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
ARDATAAMIQYHGGIGYTWEHEAHLFYKRARRMYGAFGDPPAHLERVAALTVDSLT
HHHHHHHHHEECCCCCEEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]